Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is minD [C]

Identifier: 220905127

GI number: 220905127

Start: 2248375

End: 2249295

Strand: Reverse

Name: minD [C]

Synonym: Ddes_1865

Alternate gene names: 220905127

Gene position: 2249295-2248375 (Counterclockwise)

Preceding gene: 220905128

Following gene: 220905126

Centisome position: 78.28

GC content: 61.13

Gene sequence:

>921_bases
GTGCGCGAAATAGTTGTTATCAGCGGCAAGGGCGGAACAGGAAAAACCACGGTCTGCGCTTCGCTGGCGGCGCTGGCTGC
ACGCGGGGGCGAAAAGCCCGTGCTGTGCGACCTGGATGTGGATGTGCCTGACCTGCACATTATCTTCAAGCCCCAGGTAC
GTAAGGAGCAGGCTTTCATTTCCGGCAATACGGCTGTCATCAACCGGCAGGCCTGTACGTTGTGCGGCCGCTGTATGGAT
TTGTGCCGGTTTGGGGCCGTAAGCCGGGAAGGGGAGTTCTATCATATAGACGCTCTTGATTGCGAAGGCTGCGGCGTATG
CCACAAGCTTTGTCCGGCCGGAGCTGTAGAATTTCCGCAGCGCCACTGCGGCACATGGTATCTGAGCCACACGCGGTTCG
GTTCTTTTGTGCATGCCCAGCTTGATCCCGGTCAGGAAAATTCGGGCCGCCTGGTGAGCCTGCTCAAACAGCAGGCGCGC
GAAACAGCCCGGAGTGAAGGCAGCGACCTTGTGCTTTGTGATGGTTCGCCCGGTGTGGGCTGCCCTGTGATCAGCTCTCT
TTCAGGGGCCAGCCTGGCCGTGGCCGTGGTTGAGCCGACACCGTCCGGGCGTCACGATTTCGGCCGTGTGGCTGATCTGT
GCAGGCATTTTCGCATACCTGTGGCGATCATCATCAACAAGGCCGACCTCAATACCCACGAAGCCGACGCCCTGGAGGCT
GAGGCCGCGAGCATGGGCCATACTGTGGCAGGCCGGCTGCCTTTCAGTCCGCTTGTGGTACAGGCCATGGCGCGCGGCGA
GGCGCTGACCGAGCGTGACTCGCCCCTTGCTGATGAACTTGCCCGCATCTGGCGGCGCATTGCCGGGGCGGCGGATGCGG
CTACCCGGCGCAATACAAACAGCACCATAAAAACCCTGTAA

Upstream 100 bases:

>100_bases
GCAAAGACCTGCGGCGATGGGCTGCCGCAACGCAAGGCCGCGCAGAAGGAGCGCAGGTTTCCGGAATTTGCGGCGAATCC
GCCGGCAGAGGGGGAAAGCC

Downstream 100 bases:

>100_bases
AGGATGTAGTACAATGAGCAAGACAGTTCTGGCGATTCCTTCCGAACTTCCCGGCGGCATGGACGCAGGCATGGGCATGC
ACTTTGGGCACTGCGCCATC

Product: Cobyrinic acid ac-diamide synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFISGNTAVINRQACTLCGRCMD
LCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQRHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQAR
ETARSEGSDLVLCDGSPGVGCPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA
EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTNSTIKTL

Sequences:

>Translated_306_residues
MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFISGNTAVINRQACTLCGRCMD
LCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQRHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQAR
ETARSEGSDLVLCDGSPGVGCPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA
EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTNSTIKTL
>Mature_306_residues
MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFISGNTAVINRQACTLCGRCMD
LCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQRHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQAR
ETARSEGSDLVLCDGSPGVGCPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA
EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTNSTIKTL

Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest

COG id: COG1149

COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 32613; Mature: 32613

Theoretical pI: Translated: 7.19; Mature: 7.19

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFI
CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHEEE
SGNTAVINRQACTLCGRCMDLCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQ
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCH
RHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQARETARSEGSDLVLCDGSPGVG
HHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
CPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA
CHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTN
HHHHCCCEEECCCCCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCC
STIKTL
CHHCCC
>Mature Secondary Structure
MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFI
CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHEEE
SGNTAVINRQACTLCGRCMDLCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQ
CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCH
RHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQARETARSEGSDLVLCDGSPGVG
HHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
CPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA
CHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH
EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTN
HHHHCCCEEECCCCCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCC
STIKTL
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]