| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is minD [C]
Identifier: 220905127
GI number: 220905127
Start: 2248375
End: 2249295
Strand: Reverse
Name: minD [C]
Synonym: Ddes_1865
Alternate gene names: 220905127
Gene position: 2249295-2248375 (Counterclockwise)
Preceding gene: 220905128
Following gene: 220905126
Centisome position: 78.28
GC content: 61.13
Gene sequence:
>921_bases GTGCGCGAAATAGTTGTTATCAGCGGCAAGGGCGGAACAGGAAAAACCACGGTCTGCGCTTCGCTGGCGGCGCTGGCTGC ACGCGGGGGCGAAAAGCCCGTGCTGTGCGACCTGGATGTGGATGTGCCTGACCTGCACATTATCTTCAAGCCCCAGGTAC GTAAGGAGCAGGCTTTCATTTCCGGCAATACGGCTGTCATCAACCGGCAGGCCTGTACGTTGTGCGGCCGCTGTATGGAT TTGTGCCGGTTTGGGGCCGTAAGCCGGGAAGGGGAGTTCTATCATATAGACGCTCTTGATTGCGAAGGCTGCGGCGTATG CCACAAGCTTTGTCCGGCCGGAGCTGTAGAATTTCCGCAGCGCCACTGCGGCACATGGTATCTGAGCCACACGCGGTTCG GTTCTTTTGTGCATGCCCAGCTTGATCCCGGTCAGGAAAATTCGGGCCGCCTGGTGAGCCTGCTCAAACAGCAGGCGCGC GAAACAGCCCGGAGTGAAGGCAGCGACCTTGTGCTTTGTGATGGTTCGCCCGGTGTGGGCTGCCCTGTGATCAGCTCTCT TTCAGGGGCCAGCCTGGCCGTGGCCGTGGTTGAGCCGACACCGTCCGGGCGTCACGATTTCGGCCGTGTGGCTGATCTGT GCAGGCATTTTCGCATACCTGTGGCGATCATCATCAACAAGGCCGACCTCAATACCCACGAAGCCGACGCCCTGGAGGCT GAGGCCGCGAGCATGGGCCATACTGTGGCAGGCCGGCTGCCTTTCAGTCCGCTTGTGGTACAGGCCATGGCGCGCGGCGA GGCGCTGACCGAGCGTGACTCGCCCCTTGCTGATGAACTTGCCCGCATCTGGCGGCGCATTGCCGGGGCGGCGGATGCGG CTACCCGGCGCAATACAAACAGCACCATAAAAACCCTGTAA
Upstream 100 bases:
>100_bases GCAAAGACCTGCGGCGATGGGCTGCCGCAACGCAAGGCCGCGCAGAAGGAGCGCAGGTTTCCGGAATTTGCGGCGAATCC GCCGGCAGAGGGGGAAAGCC
Downstream 100 bases:
>100_bases AGGATGTAGTACAATGAGCAAGACAGTTCTGGCGATTCCTTCCGAACTTCCCGGCGGCATGGACGCAGGCATGGGCATGC ACTTTGGGCACTGCGCCATC
Product: Cobyrinic acid ac-diamide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFISGNTAVINRQACTLCGRCMD LCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQRHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQAR ETARSEGSDLVLCDGSPGVGCPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTNSTIKTL
Sequences:
>Translated_306_residues MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFISGNTAVINRQACTLCGRCMD LCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQRHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQAR ETARSEGSDLVLCDGSPGVGCPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTNSTIKTL >Mature_306_residues MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFISGNTAVINRQACTLCGRCMD LCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQRHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQAR ETARSEGSDLVLCDGSPGVGCPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTNSTIKTL
Specific function: ATPase Required For The Correct Placement Of The Division Site. Cell Division Inhibitors Minc And Mind Act In Concert To Form An Inhibitor Capable Of Blocking Formation Of The Polar Z Ring Septums. Rapidly Oscillates Between The Poles Of The Cell To Dest
COG id: COG1149
COG function: function code C; MinD superfamily P-loop ATPase containing an inserted ferredoxin domain
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]
Homologues:
None
Paralogues:
None
Copy number: 300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 32613; Mature: 32613
Theoretical pI: Translated: 7.19; Mature: 7.19
Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFI CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHEEE SGNTAVINRQACTLCGRCMDLCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQ CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCH RHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQARETARSEGSDLVLCDGSPGVG HHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC CPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA CHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTN HHHHCCCEEECCCCCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCC STIKTL CHHCCC >Mature Secondary Structure MREIVVISGKGGTGKTTVCASLAALAARGGEKPVLCDLDVDVPDLHIIFKPQVRKEQAFI CCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHEEE SGNTAVINRQACTLCGRCMDLCRFGAVSREGEFYHIDALDCEGCGVCHKLCPAGAVEFPQ CCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCH RHCGTWYLSHTRFGSFVHAQLDPGQENSGRLVSLLKQQARETARSEGSDLVLCDGSPGVG HHCCCEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC CPVISSLSGASLAVAVVEPTPSGRHDFGRVADLCRHFRIPVAIIINKADLNTHEADALEA CHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHH EAASMGHTVAGRLPFSPLVVQAMARGEALTERDSPLADELARIWRRIAGAADAATRRNTN HHHHCCCEEECCCCCHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCC STIKTL CHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]