| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is yqgX [H]
Identifier: 220904995
GI number: 220904995
Start: 2096783
End: 2097409
Strand: Direct
Name: yqgX [H]
Synonym: Ddes_1731
Alternate gene names: 220904995
Gene position: 2096783-2097409 (Clockwise)
Preceding gene: 220904990
Following gene: 220904996
Centisome position: 72.97
GC content: 61.72
Gene sequence:
>627_bases ATGGCCGTTGCCGTTTTTCCCCTTGGCCCGTTGCAGACCAACAGCTACATCATCCATAACGCCACCAGGGCCGTGGCTGT TGACGTGGGCGGCGACCCCGCGCCCATGCTCGAATACCTGAAAAGCCACCAACTCACCCTGGATGCCGTCTGCATAACCC ACCGCCATTTTGACCACATGTACGGCGTGGCCGAACTGGCCGCCGCGACGGGCGCGCCCGTGTACATGCCGCAAGGGGAC GACAGCCTTGCCGACACCGAATCGGGCAAGGGCGGCATATGGGGATTTCCTCCGGTGCCGGATTTCAAAAGCAGCCCCAT GCCCCTCGGCAAGACAAGCATTGGCGGCATGGACTGTGAGGTGCTGGAAACCCCCGGCCATACCCCCGGCGGCGTTTCAC TGTATTTTCCCGAAGAACAGGTGGTCTTTACGGGAGACGCCCTGTTTTACCGCTCCATCGGCCGCACGGACTTTCCCGGC GGCGACCATGACACACTGCTGCGCTCCGTGCGGGACGTGCTGTTCAAGCTCCCCGCCGAAACTGTCGCTTATCCCGGTCA CGGTCCCGCCACCAAAATAGGCGATGAAGCCGCCAACAACCCTTTTTGCGGTGAGTTCAGACCATGA
Upstream 100 bases:
>100_bases GCGAAGAGGGTAATATCGGGCAGCCGAAAGATACACACCGCACTGCTGCAATGGGCACCCCCATTCTTGCGCGCAGATTC ATACTCATAAGGAACTCATC
Downstream 100 bases:
>100_bases GCAACCCTGTGGCACTTCTTTGCAGCCCGCGGCCCGGCGGCGTTTCAGATGCCGTGGCACATCTTGTTGCCGCAGGCGTG GCTGAAGCCGGGGCCGAACT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAVAVFPLGPLQTNSYIIHNATRAVAVDVGGDPAPMLEYLKSHQLTLDAVCITHRHFDHMYGVAELAAATGAPVYMPQGD DSLADTESGKGGIWGFPPVPDFKSSPMPLGKTSIGGMDCEVLETPGHTPGGVSLYFPEEQVVFTGDALFYRSIGRTDFPG GDHDTLLRSVRDVLFKLPAETVAYPGHGPATKIGDEAANNPFCGEFRP
Sequences:
>Translated_208_residues MAVAVFPLGPLQTNSYIIHNATRAVAVDVGGDPAPMLEYLKSHQLTLDAVCITHRHFDHMYGVAELAAATGAPVYMPQGD DSLADTESGKGGIWGFPPVPDFKSSPMPLGKTSIGGMDCEVLETPGHTPGGVSLYFPEEQVVFTGDALFYRSIGRTDFPG GDHDTLLRSVRDVLFKLPAETVAYPGHGPATKIGDEAANNPFCGEFRP >Mature_207_residues AVAVFPLGPLQTNSYIIHNATRAVAVDVGGDPAPMLEYLKSHQLTLDAVCITHRHFDHMYGVAELAAATGAPVYMPQGDD SLADTESGKGGIWGFPPVPDFKSSPMPLGKTSIGGMDCEVLETPGHTPGGVSLYFPEEQVVFTGDALFYRSIGRTDFPGG DHDTLLRSVRDVLFKLPAETVAYPGHGPATKIGDEAANNPFCGEFRP
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=206, Percent_Identity=29.126213592233, Blast_Score=69, Evalue=4e-12, Organism=Escherichia coli, GI1787158, Length=216, Percent_Identity=34.7222222222222, Blast_Score=115, Evalue=1e-27, Organism=Caenorhabditis elegans, GI17538952, Length=196, Percent_Identity=32.1428571428571, Blast_Score=76, Evalue=1e-14, Organism=Drosophila melanogaster, GI221330176, Length=204, Percent_Identity=27.9411764705882, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 22145; Mature: 22014
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVAVFPLGPLQTNSYIIHNATRAVAVDVGGDPAPMLEYLKSHQLTLDAVCITHRHFDHM CEEEEECCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHH YGVAELAAATGAPVYMPQGDDSLADTESGKGGIWGFPPVPDFKSSPMPLGKTSIGGMDCE HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VLETPGHTPGGVSLYFPEEQVVFTGDALFYRSIGRTDFPGGDHDTLLRSVRDVLFKLPAE EEECCCCCCCCEEEEECCCEEEEECCHHEEHHCCCCCCCCCCHHHHHHHHHHHHHHCCHH TVAYPGHGPATKIGDEAANNPFCGEFRP HEECCCCCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure AVAVFPLGPLQTNSYIIHNATRAVAVDVGGDPAPMLEYLKSHQLTLDAVCITHRHFDHM EEEEECCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHH YGVAELAAATGAPVYMPQGDDSLADTESGKGGIWGFPPVPDFKSSPMPLGKTSIGGMDCE HHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE VLETPGHTPGGVSLYFPEEQVVFTGDALFYRSIGRTDFPGGDHDTLLRSVRDVLFKLPAE EEECCCCCCCCEEEEECCCEEEEECCHHEEHHCCCCCCCCCCHHHHHHHHHHHHHHCCHH TVAYPGHGPATKIGDEAANNPFCGEFRP HEECCCCCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]