| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904985
Identifier: 220904985
GI number: 220904985
Start: 2081254
End: 2082657
Strand: Direct
Name: 220904985
Synonym: Ddes_1721
Alternate gene names: NA
Gene position: 2081254-2082657 (Clockwise)
Preceding gene: 220904984
Following gene: 220904986
Centisome position: 72.43
GC content: 56.48
Gene sequence:
>1404_bases ATGGCTGATCACGACATCCCCTATCTTGAGGAACGCAAACTCCTCAAACGCTGGCGCGGCCCCCTGCCCATGCTGGCAAA CCTGGCCCTTACGCTGGTCATTTTTGCCGTGACCTGGTGGGTGTTTCAGGATCCACGCGGCATCATGCGCTTCTACACGC CCTATGTGGGCTACAATTACTGCCGGTGGTGGCTGGTTATCCTGATCTGGATGGCCTATATTTTCGATTTCTGGCCCTTT AAAAAGCACTGGATACGCAACGCCCACCCCCTGCAGAAAGGCATCGTGCTTTCCCTGGTCTCGGTGGGACTGATGATTGT GCTGATTCACGGTTTTTTTGAAGGCGTACTGGGCAATCTGGCTTTTGCCTATTTCAGTCCTGCCCAGTTGCAGAAGCTAC CCGGACTCACGGAATTTTATGCTGTGGAGTACGCGGCCCAGGCCTGCATGATGTTTGCGGTCATCGCTTCGTGGATCAGT CCGGCCTGGCTGGTGGCCCTTGAAGGCCGCCCCTGGGAAAACCAGAAGCAGCCCGTCCGGGGATTCAGCATCTGGCTCGG CACGTTCTGCCTGAGCCTCGTCATCTATTTCATGACCATGCACAACCACATGGGCATCCTGTATTACCCCTGGCAATACT TCACCGCCATTACGCCGCCCTACTGGGAAGACTTCGCCCAGACTGTTTCTGCCAACTTCCATGTGGCATGGATCATGTGC TGCACAGTGGTGGTCTGGTTTATGGAAGGCATATGGGAACGCTATCCCTTCTGCCTGATAAAAACGCCGTGGCTGCGACG CTTCACCACGTTTTTCGGCATTATCGCCATTTCCCTCGCCCTGTGTTTCTTCTTCTGGTTCATGCAGGAACTGGTATGGG GTGATGCCATCCGCGGGCACAAGCGTGATGCCGCTCCCGACTGGCGCTGGCTGCACGTGGGTGAAACCGCGATATTCTTT CTTGTTCCGGCCCTGTTCCTTCAGTTTTATGGCGGCAACTGGCCCAACAAGTTCAGCACTCCGGTGAACGTGCTGCTTCG CACACTCATTGTCATCGTTGGCGGCATCGTCATTTACTGCCTGTATTATCAGTACGCCCATCTGGTGCTGGGTACGCAAA AGGGCTTTTCCCATCCGCAGCAGTTTCCGATGATTCCCATGATCTGGCTCATCAATATCTGGCTTATCAACTGGTGGTTC ATGGATGGCTGGCCCGGCTGGCGGCGCGAATTCCGCAGTGTGGAAGAAATCAGGGCCGACGAGCACGCCTTTGAGGAGCG CAGCGCATGGAGCCCCGCCATGGTGCCGGGCCTTGTTGTGGGCATCGTGGCAGGCGTGGCTGTGTACTTTGCCATCGTGG CGGCGCTGCCCTGGTTCAGCGCGCACTTCACCCTGGTCCAGTAG
Upstream 100 bases:
>100_bases CCTGCCCCACGCGCCCTGCCCTGACGCACCGCCGCAAGGCGACGCCGACAGACACGGGCGCCCCTGATCCGGCAACGGCC ATAACCCTGTGGAGGAAGAG
Downstream 100 bases:
>100_bases AGGCCAGCAGGGGGATGATATGAACAGACGTGAATTCATCAAAGGAGCCGCCCTGGGTGTAGGCGCGGGAACACTGGGCG CCATGGGCATATATTCCTAC
Product: amino acid transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MADHDIPYLEERKLLKRWRGPLPMLANLALTLVIFAVTWWVFQDPRGIMRFYTPYVGYNYCRWWLVILIWMAYIFDFWPF KKHWIRNAHPLQKGIVLSLVSVGLMIVLIHGFFEGVLGNLAFAYFSPAQLQKLPGLTEFYAVEYAAQACMMFAVIASWIS PAWLVALEGRPWENQKQPVRGFSIWLGTFCLSLVIYFMTMHNHMGILYYPWQYFTAITPPYWEDFAQTVSANFHVAWIMC CTVVVWFMEGIWERYPFCLIKTPWLRRFTTFFGIIAISLALCFFFWFMQELVWGDAIRGHKRDAAPDWRWLHVGETAIFF LVPALFLQFYGGNWPNKFSTPVNVLLRTLIVIVGGIVIYCLYYQYAHLVLGTQKGFSHPQQFPMIPMIWLINIWLINWWF MDGWPGWRREFRSVEEIRADEHAFEERSAWSPAMVPGLVVGIVAGVAVYFAIVAALPWFSAHFTLVQ
Sequences:
>Translated_467_residues MADHDIPYLEERKLLKRWRGPLPMLANLALTLVIFAVTWWVFQDPRGIMRFYTPYVGYNYCRWWLVILIWMAYIFDFWPF KKHWIRNAHPLQKGIVLSLVSVGLMIVLIHGFFEGVLGNLAFAYFSPAQLQKLPGLTEFYAVEYAAQACMMFAVIASWIS PAWLVALEGRPWENQKQPVRGFSIWLGTFCLSLVIYFMTMHNHMGILYYPWQYFTAITPPYWEDFAQTVSANFHVAWIMC CTVVVWFMEGIWERYPFCLIKTPWLRRFTTFFGIIAISLALCFFFWFMQELVWGDAIRGHKRDAAPDWRWLHVGETAIFF LVPALFLQFYGGNWPNKFSTPVNVLLRTLIVIVGGIVIYCLYYQYAHLVLGTQKGFSHPQQFPMIPMIWLINIWLINWWF MDGWPGWRREFRSVEEIRADEHAFEERSAWSPAMVPGLVVGIVAGVAVYFAIVAALPWFSAHFTLVQ >Mature_466_residues ADHDIPYLEERKLLKRWRGPLPMLANLALTLVIFAVTWWVFQDPRGIMRFYTPYVGYNYCRWWLVILIWMAYIFDFWPFK KHWIRNAHPLQKGIVLSLVSVGLMIVLIHGFFEGVLGNLAFAYFSPAQLQKLPGLTEFYAVEYAAQACMMFAVIASWISP AWLVALEGRPWENQKQPVRGFSIWLGTFCLSLVIYFMTMHNHMGILYYPWQYFTAITPPYWEDFAQTVSANFHVAWIMCC TVVVWFMEGIWERYPFCLIKTPWLRRFTTFFGIIAISLALCFFFWFMQELVWGDAIRGHKRDAAPDWRWLHVGETAIFFL VPALFLQFYGGNWPNKFSTPVNVLLRTLIVIVGGIVIYCLYYQYAHLVLGTQKGFSHPQQFPMIPMIWLINIWLINWWFM DGWPGWRREFRSVEEIRADEHAFEERSAWSPAMVPGLVVGIVAGVAVYFAIVAALPWFSAHFTLVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54845; Mature: 54714
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHDIPYLEERKLLKRWRGPLPMLANLALTLVIFAVTWWVFQDPRGIMRFYTPYVGYNY CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH CRWWLVILIWMAYIFDFWPFKKHWIRNAHPLQKGIVLSLVSVGLMIVLIHGFFEGVLGNL HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAYFSPAQLQKLPGLTEFYAVEYAAQACMMFAVIASWISPAWLVALEGRPWENQKQPVR HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHH GFSIWLGTFCLSLVIYFMTMHNHMGILYYPWQYFTAITPPYWEDFAQTVSANFHVAWIMC HHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCHHHHHHHHHHCCCCHHHHHHH CTVVVWFMEGIWERYPFCLIKTPWLRRFTTFFGIIAISLALCFFFWFMQELVWGDAIRGH HHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KRDAAPDWRWLHVGETAIFFLVPALFLQFYGGNWPNKFSTPVNVLLRTLIVIVGGIVIYC CCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LYYQYAHLVLGTQKGFSHPQQFPMIPMIWLINIWLINWWFMDGWPGWRREFRSVEEIRAD HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EHAFEERSAWSPAMVPGLVVGIVAGVAVYFAIVAALPWFSAHFTLVQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure ADHDIPYLEERKLLKRWRGPLPMLANLALTLVIFAVTWWVFQDPRGIMRFYTPYVGYNY CCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHH CRWWLVILIWMAYIFDFWPFKKHWIRNAHPLQKGIVLSLVSVGLMIVLIHGFFEGVLGNL HHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFAYFSPAQLQKLPGLTEFYAVEYAAQACMMFAVIASWISPAWLVALEGRPWENQKQPVR HHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCHH GFSIWLGTFCLSLVIYFMTMHNHMGILYYPWQYFTAITPPYWEDFAQTVSANFHVAWIMC HHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHHHHCCCCHHHHHHHHHHCCCCHHHHHHH CTVVVWFMEGIWERYPFCLIKTPWLRRFTTFFGIIAISLALCFFFWFMQELVWGDAIRGH HHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC KRDAAPDWRWLHVGETAIFFLVPALFLQFYGGNWPNKFSTPVNVLLRTLIVIVGGIVIYC CCCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LYYQYAHLVLGTQKGFSHPQQFPMIPMIWLINIWLINWWFMDGWPGWRREFRSVEEIRAD HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH EHAFEERSAWSPAMVPGLVVGIVAGVAVYFAIVAALPWFSAHFTLVQ HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA