| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904986
Identifier: 220904986
GI number: 220904986
Start: 2082677
End: 2083825
Strand: Direct
Name: 220904986
Synonym: Ddes_1722
Alternate gene names: NA
Gene position: 2082677-2083825 (Clockwise)
Preceding gene: 220904985
Following gene: 220904987
Centisome position: 72.48
GC content: 54.74
Gene sequence:
>1149_bases ATGAACAGACGTGAATTCATCAAAGGAGCCGCCCTGGGTGTAGGCGCGGGAACACTGGGCGCCATGGGCATATATTCCTA CTCGCCCATGCGCCGTGCCTTTCTCAAGGATGCGCAGCGCGGCTCGACGGATATCGGCATGTGCAAGGCCATACGCATTA CCAACATTTCAGAAACAAGCTGGTTCGACAACGGCGTGCTTATGCAGGACGTCACCAGCGCCGGCGGCCTGCTGGTTGAC CAGTATACCTTCAACTGGCCGCCTTTCGGCAACGGCAAAGGAGTCGGCAAGGGCAGCTATGCAGAGGGCATCAAACATAT CAAGCATCTTTTGCCCAAAAAACTGGACGAGGCATGGGAAATCACCCGTGAAAAAAGCGTGCATGCCGATAATGCAGGGG GTTTCTCCTGCCTGATCGAAGTGGAAGCCCTGGACGGCTCCGTAACCAAATACCTGTTTGACACCGGCTGGAACTATGTG TGGATGGACGCCTGCTACAAGCGTGAAGGCATAGATGTCATGCTTGCCAACAACGAGATCAAGGCTTTCATCCAGACGCA CGAGCATATGGACCATTACTGGGGCCTGCCGGCTGTCACCAAATACAATCCCGATATTCCGGTATACATACCCAATACCT TCTATCCCGAAGGCAAGCAGTACCTCAAGGACTGCGGACACGTCGGAAAACTTACAGAAGTTCCCAAGGGGCTGCACAAG CTGGAAAACGGCGTGGCGCTGTATACCTTTGACTGCCCTATCATTTTCCGCGTTTTCGGCGAGCTTTCCATGTACTGCAA CGTAAAGGACGTGGGCCTTGTAAGCATTACCGGCTGCTGCCATCAGGGTATCATCCTTTTTGCCGACACCGCCTACAAGG AACTGGCCTATGAAAACGACCAGTTCTACGGCCTCTACGGCGGGCTGCACATCTCGCCCTTTGACGACTGGGACCCCAAG TATGACGACCTCGTCATCGGATTGAAAAAATGGGATCTGCAACGGGTCGGATGCAACCACTGCACAGGACTCATTACGGC GCAAAAATTCGTGGACGCGGGCTATCCCGTGGTCAAGGGCACGGCGCGCTTCCGCTCCAAGACCACCAACTATCTCGGCA ACGGCGACGTTATCACCTTCCCCTCCTGA
Upstream 100 bases:
>100_bases ATCGTGGCAGGCGTGGCTGTGTACTTTGCCATCGTGGCGGCGCTGCCCTGGTTCAGCGCGCACTTCACCCTGGTCCAGTA GAGGCCAGCAGGGGGATGAT
Downstream 100 bases:
>100_bases CTCTGAACACCCCTGCGGGACCAGGCATGCCGTCCAGGTCCCGCAGAGCCATCCGGCGCGCCACCACGCGCCACAACCAG GGAGCCGCCATGCATCTGCA
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Beta-Lactamase-Like; Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Beta-Lactamase
Number of amino acids: Translated: 382; Mature: 382
Protein sequence:
>382_residues MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETSWFDNGVLMQDVTSAGGLLVD QYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWEITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYV WMDACYKREGIDVMLANNEIKAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYENDQFYGLYGGLHISPFDDWDPK YDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKGTARFRSKTTNYLGNGDVITFPS
Sequences:
>Translated_382_residues MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETSWFDNGVLMQDVTSAGGLLVD QYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWEITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYV WMDACYKREGIDVMLANNEIKAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYENDQFYGLYGGLHISPFDDWDPK YDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKGTARFRSKTTNYLGNGDVITFPS >Mature_382_residues MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETSWFDNGVLMQDVTSAGGLLVD QYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWEITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYV WMDACYKREGIDVMLANNEIKAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYENDQFYGLYGGLHISPFDDWDPK YDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKGTARFRSKTTNYLGNGDVITFPS
Specific function: Unknown
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42598; Mature: 42598
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETS CCHHHHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC WFDNGVLMQDVTSAGGLLVDQYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWE CCCCCEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYVWMDACYKREGIDVMLANNEI HHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEEECCHH KAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK HHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHH LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYEND HHCCCEEEEECCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCEEEEECCHHHHHHCCCC QFYGLYGGLHISPFDDWDPKYDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKG CEEEEECCCEECCCCCCCCCCCCEEEEHHHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEC TARFRSKTTNYLGNGDVITFPS HHHHHHHCCCCCCCCCEEECCC >Mature Secondary Structure MNRREFIKGAALGVGAGTLGAMGIYSYSPMRRAFLKDAQRGSTDIGMCKAIRITNISETS CCHHHHHHHHHEECCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCC WFDNGVLMQDVTSAGGLLVDQYTFNWPPFGNGKGVGKGSYAEGIKHIKHLLPKKLDEAWE CCCCCEEHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ITREKSVHADNAGGFSCLIEVEALDGSVTKYLFDTGWNYVWMDACYKREGIDVMLANNEI HHHHCCCCCCCCCCEEEEEEEEECCCHHHHHHHHCCCCEEEEEHHHCCCCCEEEEECCHH KAFIQTHEHMDHYWGLPAVTKYNPDIPVYIPNTFYPEGKQYLKDCGHVGKLTEVPKGLHK HHHHHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCCHHHHHHHCCCCCCHHHHHHHHHH LENGVALYTFDCPIIFRVFGELSMYCNVKDVGLVSITGCCHQGIILFADTAYKELAYEND HHCCCEEEEECCHHHHHHHHHHHEEECCCCCCEEEEECCCCCCEEEEECCHHHHHHCCCC QFYGLYGGLHISPFDDWDPKYDDLVIGLKKWDLQRVGCNHCTGLITAQKFVDAGYPVVKG CEEEEECCCEECCCCCCCCCCCCEEEEHHHHCHHHCCCCHHHHHHHHHHHHHCCCCEEEC TARFRSKTTNYLGNGDVITFPS HHHHHHHCCCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA