| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is glmM
Identifier: 220904977
GI number: 220904977
Start: 2071735
End: 2073087
Strand: Reverse
Name: glmM
Synonym: Ddes_1713
Alternate gene names: 220904977
Gene position: 2073087-2071735 (Counterclockwise)
Preceding gene: 220904978
Following gene: 220904976
Centisome position: 72.15
GC content: 61.57
Gene sequence:
>1353_bases ATGGCCGATCGTCTTTTCGGCACGGATGGTTTGCGTGGCACGGTGAATACATACCCGATGACGGTGGACGTTGCCCTGCG TCTGGGGCTGGCCGCAGGGATTCGTTTCCGGCGGGGTCAGCATCAGCATAAAGTGGTTATCGGCAAGGACACGCGCCTGT CGGGGTATATGTTTGAGTCCGCCCTCACGGCGGGGCTGTGCGCTGCGGGTATGCACGTCATCATGACAGGTCCGTTGCCT ACCCCGGCCATATCTTTTCTGACGCGCAGCATGCGTGCGGATCTGGGTGTGGTTATTTCGGCCTCGCACAATCCCTTTCA GGACAACGGCATAAAGTTTTTTGATGCCGACGGGTACAAGCTGCCCGATATGGCCGAAGACGAGATCGCGGCCATGGTGC TGGATGCCGGTTTTTCCTGGCCGTATCCCGATTCGCGCGGCGTGGGCCGTGCCACAAAGATTGAAGACGCGGGCGGGCGC TACATTGTCTACACCAAAAACTGCTTTCCTGCCCACCTGACCCTTTCAGGCCTGCGCATTGTGGTGGACTGTGCCAACGG GGCAAGCTACAAGGTGGCTCCCCTTGCTCTGGAAGAGCTTGGGGCTGAAGTATTCCGCATCGGGACCGGCCCTGACGGAA CCAATATCAACGAGCACTGCGGCTCGCTGCATCCTGACGTGGTCGCGGCCAAGGTGCGCGAGGTGCGGGCCGACATCGGC CTGGCCCTGGATGGCGATGCCGACCGCCTTATCGTGGTGGACGAGCGCGGGGTAGTTCTGGACGGCGACCAGATCATGGC CCTGTGTGCCCAGGCCATGATGGCCAGGGGCGAACTGCCCGGCAACCTGCTGGTAGCCACGGCCATGAGCAACATGGCTC TGGAACTTTTCATGCGCGATCACGGCGGTCAGCTTTTGCGCACCAAGGTGGGCGACCGTTACGTCATGGAGGCCATGCGC CGTGAAGGAGCCATGCTCGGCGGTGAACAGTCGGGGCATCTTATTTTCCACCGTTACAGCACCACGGGTGACGGACTGCT GGCCGCGCTGCAGATATTGCGTATCATGCGGGAAAAAGAGCGGCCGCTTTCTGAACTGGCCGGGCTGCTGACGCCCTTTC CGCAAAAGCTCATCAACGTGCGGGTGGAAAAGCGCCTGCCCTTTGAGGAGCGCCCCGCCATTGGTGAAGCCGTGGCCCAG GTGGAAAAAGAACTGGGCGGCCGTGGGCGGGTACTTTTGCGCTATTCCGGCACCGAGGCCCTGTGCCGCGTCATGGTGGA AGGCGAGCATGAAGACAGGGTGCGGACCTACGCCGAAGACCTGGCCCAGGTGGTGGAGCGGGAACTGCGTTAA
Upstream 100 bases:
>100_bases CCGGCACAGAAGAAGTTACGGTAAGCCGCAAGAAAAAATAGCCCGTACTCCCGGCAAGTTGCGGGAAACGGAGGGCGCTT TTGCCCTTGAAGGAGATGGC
Downstream 100 bases:
>100_bases GCTCCTTGCGGACATCCGGTTTTTGAACGAGACTACAGACAAGCAAAGCAACAGCGGAGGCGAGCATGAAGGATATTCGC AAGGTTATTATTCCCGTGGC
Product: phosphoglucosamine mutase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MADRLFGTDGLRGTVNTYPMTVDVALRLGLAAGIRFRRGQHQHKVVIGKDTRLSGYMFESALTAGLCAAGMHVIMTGPLP TPAISFLTRSMRADLGVVISASHNPFQDNGIKFFDADGYKLPDMAEDEIAAMVLDAGFSWPYPDSRGVGRATKIEDAGGR YIVYTKNCFPAHLTLSGLRIVVDCANGASYKVAPLALEELGAEVFRIGTGPDGTNINEHCGSLHPDVVAAKVREVRADIG LALDGDADRLIVVDERGVVLDGDQIMALCAQAMMARGELPGNLLVATAMSNMALELFMRDHGGQLLRTKVGDRYVMEAMR REGAMLGGEQSGHLIFHRYSTTGDGLLAALQILRIMREKERPLSELAGLLTPFPQKLINVRVEKRLPFEERPAIGEAVAQ VEKELGGRGRVLLRYSGTEALCRVMVEGEHEDRVRTYAEDLAQVVERELR
Sequences:
>Translated_450_residues MADRLFGTDGLRGTVNTYPMTVDVALRLGLAAGIRFRRGQHQHKVVIGKDTRLSGYMFESALTAGLCAAGMHVIMTGPLP TPAISFLTRSMRADLGVVISASHNPFQDNGIKFFDADGYKLPDMAEDEIAAMVLDAGFSWPYPDSRGVGRATKIEDAGGR YIVYTKNCFPAHLTLSGLRIVVDCANGASYKVAPLALEELGAEVFRIGTGPDGTNINEHCGSLHPDVVAAKVREVRADIG LALDGDADRLIVVDERGVVLDGDQIMALCAQAMMARGELPGNLLVATAMSNMALELFMRDHGGQLLRTKVGDRYVMEAMR REGAMLGGEQSGHLIFHRYSTTGDGLLAALQILRIMREKERPLSELAGLLTPFPQKLINVRVEKRLPFEERPAIGEAVAQ VEKELGGRGRVLLRYSGTEALCRVMVEGEHEDRVRTYAEDLAQVVERELR >Mature_449_residues ADRLFGTDGLRGTVNTYPMTVDVALRLGLAAGIRFRRGQHQHKVVIGKDTRLSGYMFESALTAGLCAAGMHVIMTGPLPT PAISFLTRSMRADLGVVISASHNPFQDNGIKFFDADGYKLPDMAEDEIAAMVLDAGFSWPYPDSRGVGRATKIEDAGGRY IVYTKNCFPAHLTLSGLRIVVDCANGASYKVAPLALEELGAEVFRIGTGPDGTNINEHCGSLHPDVVAAKVREVRADIGL ALDGDADRLIVVDERGVVLDGDQIMALCAQAMMARGELPGNLLVATAMSNMALELFMRDHGGQLLRTKVGDRYVMEAMRR EGAMLGGEQSGHLIFHRYSTTGDGLLAALQILRIMREKERPLSELAGLLTPFPQKLINVRVEKRLPFEERPAIGEAVAQV EKELGGRGRVLLRYSGTEALCRVMVEGEHEDRVRTYAEDLAQVVERELR
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family
Homologues:
Organism=Escherichia coli, GI1789566, Length=445, Percent_Identity=50.1123595505618, Blast_Score=388, Evalue=1e-109, Organism=Escherichia coli, GI1788361, Length=438, Percent_Identity=26.7123287671233, Blast_Score=118, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLMM_DESDA (B8J1K3)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002480289.1 - ProteinModelPortal: B8J1K3 - GeneID: 7285424 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_1713 - HOGENOM: HBG644964 - ProtClustDB: PRK14314 - HAMAP: MF_01554_B - InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 - InterPro: IPR006352 - Gene3D: G3DSA:3.40.120.10 - PRINTS: PR00509 - TIGRFAMs: TIGR01455
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV; SSF53738 A-D-PHexomutase_a/b/a-I/II/III
EC number: =5.4.2.10
Molecular weight: Translated: 49047; Mature: 48916
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00710 PGM_PMM
Important sites: ACT_SITE 102-102
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRLFGTDGLRGTVNTYPMTVDVALRLGLAAGIRFRRGQHQHKVVIGKDTRLSGYMFES CCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCHHHCCCCCCCEEEEECCCCCCHHHHHH ALTAGLCAAGMHVIMTGPLPTPAISFLTRSMRADLGVVISASHNPFQDNGIKFFDADGYK HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCC LPDMAEDEIAAMVLDAGFSWPYPDSRGVGRATKIEDAGGRYIVYTKNCFPAHLTLSGLRI CCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEECCEEE VVDCANGASYKVAPLALEELGAEVFRIGTGPDGTNINEHCGSLHPDVVAAKVREVRADIG EEECCCCCCEEEHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCC LALDGDADRLIVVDERGVVLDGDQIMALCAQAMMARGELPGNLLVATAMSNMALELFMRD EEEECCCCEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHEEEEEHH HGGQLLRTKVGDRYVMEAMRREGAMLGGEQSGHLIFHRYSTTGDGLLAALQILRIMREKE CCCCEEEHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC RPLSELAGLLTPFPQKLINVRVEKRLPFEERPAIGEAVAQVEKELGGRGRVLLRYSGTEA CCHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH LCRVMVEGEHEDRVRTYAEDLAQVVERELR HHHHHHCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ADRLFGTDGLRGTVNTYPMTVDVALRLGLAAGIRFRRGQHQHKVVIGKDTRLSGYMFES CCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCHHHCCCCCCCEEEEECCCCCCHHHHHH ALTAGLCAAGMHVIMTGPLPTPAISFLTRSMRADLGVVISASHNPFQDNGIKFFDADGYK HHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEECCCCC LPDMAEDEIAAMVLDAGFSWPYPDSRGVGRATKIEDAGGRYIVYTKNCFPAHLTLSGLRI CCCCCHHHHHHHHEECCCCCCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEEECCEEE VVDCANGASYKVAPLALEELGAEVFRIGTGPDGTNINEHCGSLHPDVVAAKVREVRADIG EEECCCCCCEEEHHHHHHHCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCC LALDGDADRLIVVDERGVVLDGDQIMALCAQAMMARGELPGNLLVATAMSNMALELFMRD EEEECCCCEEEEEECCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHEEEEEHH HGGQLLRTKVGDRYVMEAMRREGAMLGGEQSGHLIFHRYSTTGDGLLAALQILRIMREKE CCCCEEEHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHC RPLSELAGLLTPFPQKLINVRVEKRLPFEERPAIGEAVAQVEKELGGRGRVLLRYSGTEA CCHHHHHHHHCCCHHHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCHHH LCRVMVEGEHEDRVRTYAEDLAQVVERELR HHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA