| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904968
Identifier: 220904968
GI number: 220904968
Start: 2056583
End: 2056930
Strand: Reverse
Name: 220904968
Synonym: Ddes_1704
Alternate gene names: NA
Gene position: 2056930-2056583 (Counterclockwise)
Preceding gene: 220904971
Following gene: 220904963
Centisome position: 71.58
GC content: 54.89
Gene sequence:
>348_bases ATGTCGCAACTAAAGGACTTCGCACTTTACGATATAGACTGGAACCTGACCCCCGAGCACGCCGTCACGATGTATCTTGA ATGGGGTAATAACGACTGGCATTCGGAGTATCCTCCGGTTCGTTCCAAGGATGACGTGGCTCACTATTTTGTGGTGGACA GCTGGCAAAGCCCCCCCATGGTCCGTCTGGTACGCCGCAATTCAGAAAGGGCCGACGATCTCATAAGTCTGCCGCTGCCC AAGAACCTGATGGATGATTTTCGCAAGGAACACGGCGAGTGGCGCGGCATCAGCGCTCCTACTCCGGCGGTCAGGTCTTG GCTCAAGCATGAGCTTGAGCAGGAGTAA
Upstream 100 bases:
>100_bases CTTTTTACATTGTGACGGCAGGGTAAGTTTTTTTGCGAGTACCTCTTGCCAGTCCTGTCAAGAATGATTATTGTTAAATA AAGCCAATGAGGAGGACACC
Downstream 100 bases:
>100_bases CTACGGCAACGGCGCAAAGCCGGCCTGAACAGGTCAGATACTTTTCCGCCATACAAGGTGAAAACGCGTAAGGACTCCGT GTGGGGTCCTTACGCGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSQLKDFALYDIDWNLTPEHAVTMYLEWGNNDWHSEYPPVRSKDDVAHYFVVDSWQSPPMVRLVRRNSERADDLISLPLP KNLMDDFRKEHGEWRGISAPTPAVRSWLKHELEQE
Sequences:
>Translated_115_residues MSQLKDFALYDIDWNLTPEHAVTMYLEWGNNDWHSEYPPVRSKDDVAHYFVVDSWQSPPMVRLVRRNSERADDLISLPLP KNLMDDFRKEHGEWRGISAPTPAVRSWLKHELEQE >Mature_114_residues SQLKDFALYDIDWNLTPEHAVTMYLEWGNNDWHSEYPPVRSKDDVAHYFVVDSWQSPPMVRLVRRNSERADDLISLPLPK NLMDDFRKEHGEWRGISAPTPAVRSWLKHELEQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13649; Mature: 13518
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLKDFALYDIDWNLTPEHAVTMYLEWGNNDWHSEYPPVRSKDDVAHYFVVDSWQSPPM CCCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH VRLVRRNSERADDLISLPLPKNLMDDFRKEHGEWRGISAPTPAVRSWLKHELEQE HHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure SQLKDFALYDIDWNLTPEHAVTMYLEWGNNDWHSEYPPVRSKDDVAHYFVVDSWQSPPM CCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHH VRLVRRNSERADDLISLPLPKNLMDDFRKEHGEWRGISAPTPAVRSWLKHELEQE HHHHHCCCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA