| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
Click here to switch to the map view.
The map label for this gene is yebN [C]
Identifier: 220904963
GI number: 220904963
Start: 2050301
End: 2050882
Strand: Reverse
Name: yebN [C]
Synonym: Ddes_1699
Alternate gene names: 220904963
Gene position: 2050882-2050301 (Counterclockwise)
Preceding gene: 220904968
Following gene: 220904962
Centisome position: 71.37
GC content: 58.76
Gene sequence:
>582_bases ATGACGATTTTCGCCGTCTTTCTGCTGGCCATAGCCCTGTCGATGGACGCTTTTGCCGTGGCCGTGGTCTCTGGTTGCGC CCTGCAAAAGCCCAAGGTTTGCCATTATGTGCGCCTTTCTGCCGCCTTTGGTTTTTTTCAGTTTGCCATGCCGGTTATCG GATGGTGGCTGGGCGTGTCTGTGCGGGAGTATATGGAAGCGTGGGATCATTGGATTGCTTTTGTGCTGCTGGGCTGGATT GGCGGCAAGATGGCTCTTTCGGGCCTGCGGGCGCTCAGGAACCGTGAATCCTGCGCCTGCCCTTCGGTCGATCCCACCGC CGGGCGCAACCTTGTGGTGCTTGGGGTGGCTACCAGCATCGATGCTCTGGCCGTGGGCCTTTCCCTGGCTATTCTTGGTA CGCCCATCTGGGCGGATGCGGCCATCATCGGCATTGTTTGCGCGGTGATCACGGCTTGTGGCGTGTATCTCGGCAAGACA CTGGCCAATCTTTGTGCTCTCAACGGATGGGCGGAACTGGCGGGAGGCTTGACGCTGCTTGCCATTGCCTGCAACATTCT GCGGGAGCATCAGGTTTTCTGA
Upstream 100 bases:
>100_bases CCGGGCTGGTTGCTTGTACAGTGCAAAGGCATGATCTATAGTGGCCCGACCCGCAAACCATAACCAGCCGGGCGCCTGCC CGCGCACGAGATGTATCTTT
Downstream 100 bases:
>100_bases AATCACGCCCGCCTGCGCGCTACCCGTCTGCCGGACCGGCAGGCAGGACCGCACGGCGGAAGAACAAGGAGGCCACATGT CTACTGTCAGCGCCAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTIFAVFLLAIALSMDAFAVAVVSGCALQKPKVCHYVRLSAAFGFFQFAMPVIGWWLGVSVREYMEAWDHWIAFVLLGWI GGKMALSGLRALRNRESCACPSVDPTAGRNLVVLGVATSIDALAVGLSLAILGTPIWADAAIIGIVCAVITACGVYLGKT LANLCALNGWAELAGGLTLLAIACNILREHQVF
Sequences:
>Translated_193_residues MTIFAVFLLAIALSMDAFAVAVVSGCALQKPKVCHYVRLSAAFGFFQFAMPVIGWWLGVSVREYMEAWDHWIAFVLLGWI GGKMALSGLRALRNRESCACPSVDPTAGRNLVVLGVATSIDALAVGLSLAILGTPIWADAAIIGIVCAVITACGVYLGKT LANLCALNGWAELAGGLTLLAIACNILREHQVF >Mature_192_residues TIFAVFLLAIALSMDAFAVAVVSGCALQKPKVCHYVRLSAAFGFFQFAMPVIGWWLGVSVREYMEAWDHWIAFVLLGWIG GKMALSGLRALRNRESCACPSVDPTAGRNLVVLGVATSIDALAVGLSLAILGTPIWADAAIIGIVCAVITACGVYLGKTL ANLCALNGWAELAGGLTLLAIACNILREHQVF
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family
Homologues:
Organism=Escherichia coli, GI87081981, Length=193, Percent_Identity=36.2694300518135, Blast_Score=115, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1699_DESDA (B8J1I9)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002480275.1 - GeneID: 7285410 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_1699 - HOGENOM: HBG709685 - HAMAP: MF_01521 - InterPro: IPR003810 - InterPro: IPR022929
Pfam domain/function: PF02659 DUF204
EC number: NA
Molecular weight: Translated: 20428; Mature: 20296
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x275371b0)-; HASH(0x4056082c)-; HASH(0x286d9e90)-; HASH(0x405258e8)-; HASH(0x280e5a44)-; HASH(0x283d2b68)-;
Cys/Met content:
4.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIFAVFLLAIALSMDAFAVAVVSGCALQKPKVCHYVRLSAAFGFFQFAMPVIGWWLGVS CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREYMEAWDHWIAFVLLGWIGGKMALSGLRALRNRESCACPSVDPTAGRNLVVLGVATSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHH DALAVGLSLAILGTPIWADAAIIGIVCAVITACGVYLGKTLANLCALNGWAELAGGLTLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AIACNILREHQVF HHHHHHHHHHCCH >Mature Secondary Structure TIFAVFLLAIALSMDAFAVAVVSGCALQKPKVCHYVRLSAAFGFFQFAMPVIGWWLGVS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VREYMEAWDHWIAFVLLGWIGGKMALSGLRALRNRESCACPSVDPTAGRNLVVLGVATSI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHH DALAVGLSLAILGTPIWADAAIIGIVCAVITACGVYLGKTLANLCALNGWAELAGGLTLL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH AIACNILREHQVF HHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA