| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904910
Identifier: 220904910
GI number: 220904910
Start: 1979324
End: 1980586
Strand: Direct
Name: 220904910
Synonym: Ddes_1645
Alternate gene names: NA
Gene position: 1979324-1980586 (Clockwise)
Preceding gene: 220904909
Following gene: 220904911
Centisome position: 68.88
GC content: 59.46
Gene sequence:
>1263_bases ATGTCGCCCCTTGCCGCTTCTCCCGTTGAAACCGTGCGACAACCCGTATCACCGGAACCGCCGCAAACCCTGTTAAGCCG TGATTTTATTCTGCTGTTTTGCATGACTATGTTCTGCAACAGCTTTATCGCCGTTTTTTACTGTTTTGAACAATGGCTGG AAGGCATGACCATCAGCCCCAACTGGCGCGGAGTGCTGCTGGCCTCCATGTTTGCCATGGTGCTGCTGTTTCGCCCGCTG GCCAGCGTGCTGCTGCTTCGCCGCGGTAAACTGGCCGCCATGGCCGTTTCCATAGTCATATCAAGCTGTGTCATGCTGGG CTATTCACATGTTGGCGGCCCACACGTTATCGGCATGATATGGGCGTTGCGCATCGTGCAGGGCATCGCCCTGGCCGTAT TTTCAAGCTGTACCGTAGCCGTGCTTGTCAGCTGCATTCCCAAGGGGCAGAGCGCGCGCGGCTTTGCCATTTTTTCGCTT ACCATGCTGCTGCCCTATTCCATCATTCCCGCAGCCGCAGAACCCATACTGCCTCTGCTGGGTGGAGAAGCCGGACTTTT TGCGGCATCTGCCCTGCTCGGCCTACCCTCGCTGCTCATGCTGATTCCTCTGGCCCCGCGCCTGAGAACTCCCGAAATGG CCCCCGAAGACGGGGGCGGCATGTCGGGCCGCGCCCTATGGCAGGCTGTGAGCCGTTCGGGCCTGCTCTTTGTTTACCTG GCCTGTCTGGCCTTCAGCATCATGACCGTGCAGGCCATATTCTTCATCAAGGGGCTGTGTTCGGTCACCGGGGCGAATCC GGCATGGTTCTTCAGTATTTATACACTGACCATCATACTTGTGCGCCTTGCGGGCAGCAACCGGCTGGATACCATGCCGC GCTACCGGGTCACACTTTTATGCAGTGTAGTGCTGGCATGTTGCATGCTGGGCCTGGCCTGGGGGCCGCTGTGGGCCTTT GTGCCGCTGACCTGCCTGTACGGGCTGGGCCTGGGCCTGCTCTATCCGCTGCTGGCGGCTGCGGTATATGACCGCTCAAG CCCCGCCACACGCTCCATCAACTCCAACGTCATGATGGCCACCTTTGACGCCAGCGGCATGCTGGCCCCGCTGATCGGAG GCATGGTTATCAACGCGGGCTTCGGTTACAGGGGCGTATTCACGGCCACGGCAATTTCCGTAAGCCTGTGTGGCTGCTTC ATGCTGGCCGACAGGCTGCGCCTGGCCCTGCGCGAACGTAGGCAGATACCCGAAATGCAATAA
Upstream 100 bases:
>100_bases ACAAAATTTCTTGAAGGCGAGTATCATTAGCCGCAGCTTCCACCGGAGCAGCCGTTGCGCGTCTGCCGCAACGAGCGCGG CATAACGTAATTGAGGCCAC
Downstream 100 bases:
>100_bases ATTCACTGGCCGGCAAGACCGGCAGCACGGCTGTTTCGTACAGGATTACTCCTGAACAGCCTGCGTGCCGTTTTATCGGC ACGTCCTTATGAGAACAACA
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: Transporter Facilitator Family; Facilitator Transporter
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MSPLAASPVETVRQPVSPEPPQTLLSRDFILLFCMTMFCNSFIAVFYCFEQWLEGMTISPNWRGVLLASMFAMVLLFRPL ASVLLLRRGKLAAMAVSIVISSCVMLGYSHVGGPHVIGMIWALRIVQGIALAVFSSCTVAVLVSCIPKGQSARGFAIFSL TMLLPYSIIPAAAEPILPLLGGEAGLFAASALLGLPSLLMLIPLAPRLRTPEMAPEDGGGMSGRALWQAVSRSGLLFVYL ACLAFSIMTVQAIFFIKGLCSVTGANPAWFFSIYTLTIILVRLAGSNRLDTMPRYRVTLLCSVVLACCMLGLAWGPLWAF VPLTCLYGLGLGLLYPLLAAAVYDRSSPATRSINSNVMMATFDASGMLAPLIGGMVINAGFGYRGVFTATAISVSLCGCF MLADRLRLALRERRQIPEMQ
Sequences:
>Translated_420_residues MSPLAASPVETVRQPVSPEPPQTLLSRDFILLFCMTMFCNSFIAVFYCFEQWLEGMTISPNWRGVLLASMFAMVLLFRPL ASVLLLRRGKLAAMAVSIVISSCVMLGYSHVGGPHVIGMIWALRIVQGIALAVFSSCTVAVLVSCIPKGQSARGFAIFSL TMLLPYSIIPAAAEPILPLLGGEAGLFAASALLGLPSLLMLIPLAPRLRTPEMAPEDGGGMSGRALWQAVSRSGLLFVYL ACLAFSIMTVQAIFFIKGLCSVTGANPAWFFSIYTLTIILVRLAGSNRLDTMPRYRVTLLCSVVLACCMLGLAWGPLWAF VPLTCLYGLGLGLLYPLLAAAVYDRSSPATRSINSNVMMATFDASGMLAPLIGGMVINAGFGYRGVFTATAISVSLCGCF MLADRLRLALRERRQIPEMQ >Mature_419_residues SPLAASPVETVRQPVSPEPPQTLLSRDFILLFCMTMFCNSFIAVFYCFEQWLEGMTISPNWRGVLLASMFAMVLLFRPLA SVLLLRRGKLAAMAVSIVISSCVMLGYSHVGGPHVIGMIWALRIVQGIALAVFSSCTVAVLVSCIPKGQSARGFAIFSLT MLLPYSIIPAAAEPILPLLGGEAGLFAASALLGLPSLLMLIPLAPRLRTPEMAPEDGGGMSGRALWQAVSRSGLLFVYLA CLAFSIMTVQAIFFIKGLCSVTGANPAWFFSIYTLTIILVRLAGSNRLDTMPRYRVTLLCSVVLACCMLGLAWGPLWAFV PLTCLYGLGLGLLYPLLAAAVYDRSSPATRSINSNVMMATFDASGMLAPLIGGMVINAGFGYRGVFTATAISVSLCGCFM LADRLRLALRERRQIPEMQ
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45151; Mature: 45020
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 8.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLAASPVETVRQPVSPEPPQTLLSRDFILLFCMTMFCNSFIAVFYCFEQWLEGMTISP CCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC NWRGVLLASMFAMVLLFRPLASVLLLRRGKLAAMAVSIVISSCVMLGYSHVGGPHVIGMI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH WALRIVQGIALAVFSSCTVAVLVSCIPKGQSARGFAIFSLTMLLPYSIIPAAAEPILPLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GGEAGLFAASALLGLPSLLMLIPLAPRLRTPEMAPEDGGGMSGRALWQAVSRSGLLFVYL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHH ACLAFSIMTVQAIFFIKGLCSVTGANPAWFFSIYTLTIILVRLAGSNRLDTMPRYRVTLL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH CSVVLACCMLGLAWGPLWAFVPLTCLYGLGLGLLYPLLAAAVYDRSSPATRSINSNVMMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE TFDASGMLAPLIGGMVINAGFGYRGVFTATAISVSLCGCFMLADRLRLALRERRQIPEMQ EECCCCHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SPLAASPVETVRQPVSPEPPQTLLSRDFILLFCMTMFCNSFIAVFYCFEQWLEGMTISP CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC NWRGVLLASMFAMVLLFRPLASVLLLRRGKLAAMAVSIVISSCVMLGYSHVGGPHVIGMI CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH WALRIVQGIALAVFSSCTVAVLVSCIPKGQSARGFAIFSLTMLLPYSIIPAAAEPILPLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GGEAGLFAASALLGLPSLLMLIPLAPRLRTPEMAPEDGGGMSGRALWQAVSRSGLLFVYL CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHH ACLAFSIMTVQAIFFIKGLCSVTGANPAWFFSIYTLTIILVRLAGSNRLDTMPRYRVTLL HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH CSVVLACCMLGLAWGPLWAFVPLTCLYGLGLGLLYPLLAAAVYDRSSPATRSINSNVMMA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE TFDASGMLAPLIGGMVINAGFGYRGVFTATAISVSLCGCFMLADRLRLALRERRQIPEMQ EECCCCHHHHHHCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA