| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ppsA [H]
Identifier: 220904909
GI number: 220904909
Start: 1976692
End: 1979253
Strand: Direct
Name: ppsA [H]
Synonym: Ddes_1644
Alternate gene names: 220904909
Gene position: 1976692-1979253 (Clockwise)
Preceding gene: 220904908
Following gene: 220904910
Centisome position: 68.79
GC content: 60.07
Gene sequence:
>2562_bases ATGGTCGGCAAACTGAAAAAATTCTTTGGCCGCAAGCCGCGTATTTCCCGCGAGCAGGCCATGACCGCCTTTCACAGACG ATATGCCTCATTCAAGGAACTGCTTCAGGCCAACGCAGACCTGGCGGGCATCCTGGCCGGTCTTAACGCCGCACAGCAGG GCGAGCGTCATATGGAAACAAGCCAGGTACGCAAAGAAGCCCGGCGGGCTATCTTCCGCTGTGACCGCATGGCCGCCGCA CTCAACGACATTTCCGGACAGCGCCATCAGGGGCTGAATACGTCCGTGCACAGCATTGCCGGACGGATAGAAAAAGAGCT GGATCAGCGAACCCGTGGCGATGTCCCCAGCCTGACCCTGGACCTTACAGAAGTGGACGCCAGCATGGCCTACAGCGTGG GCGGCAAAAACGCCAACCTCGGCGAGTTACGGAACATGCTGGACATGCCCGTGCCGCGCGGCTTCGCCATTACCATAAAA GCCGGAACCATTTTTCTGCTGCGAACACCGGGGCTTTTCAAAAGCGTTTACTCCCTGCTGCGCTCCGTGGACCCGGACAA ACCGGACAGCATCAATGCTGTATCCCGTCAGGTGGAAAAACTCATCCGCGAGGCTGCCGTTCCCAAGGAAGTGGAAGATG CCCTGCTCAAAGCCTGGGACATGGCTTATGACGATGATCCCCAGGTGGTGGCGGCCCTGCGCTCCAGCGCCATCGCCGAA GACGGGGTGCAGTCTTTTGCCGGGCAGTACCGCAGCCTGCTGGGCGTAACACGCAACGACCTGATTCCGGCATTCAAGGT CGTTGTTGCCAGCCTGTTTTCACCCCGCGCCCTGACCTATCGCGCCAGCCACGGCTATGCCCTTGATGCCACGGGCATGG GTCTGTGCTGTGTAGAGATGGTGCGCGCCCGCGCCGCAGGCGTCGTTTTTTCCCGCCACCCCGTAGACCTGCGTTCCAAC AGCATTGTCATCAACGGCCTGTGGGGTCTGGGTGAAATGGTGGTGGACGGTTCAGGCACACCGGACCAGTGGCTGGTATC GCGCGCCACCGGAAAAATTACCAAGACCACCATTGCCCACAAGGCTGTGCGCCTGCGTCTGGTGCGCAAGGTGTCGGGGG TGGAAAGCGAACTGGCCCCCGTGCCAGATGCCTTGCGGGATGTTCCCTGCCTCAGCGATGATCAGGTACGCCGCCTGGCG GACATGGCCATGGAGCTGGAACGGCACTACCAGTATCCGCAGGATATGGAATGGGCTGTGGACGAGGAGGATCAGATCAT CCTGCTGCAGACCCGCCCCATGGGGCTGGACAGTACGGCGGAAGAAAAAGCCGCCCCCATCCTTGGGCATCTGCGCCCCC TGCTTTCCGGCGCAGACGTGGCCGCCAGAGGCGTGGGCTGCGGTCCTGTGGTTTTTGTGGGCGATGGAGAAGATATTACC CACTTTCCCGAAGGCGCGGTCATGCTTATGGACCACTCCTCGCCCAGCGCCATGTCGGCCATGCGGCGGGCCTCGGCCAT TATCGCCCAGACGGGCAGCCTTACCGGGCATATGGCTTCCATCTGCCGTGAGTTCGGCGTGCCCACGCTTATGAATCTGC CCGGCGTCACGGGCGTGCTCAGCGAAGGCCAGGTCATCACCGTGGATGCCCTCACCGGCAGGGTTTTTGACGGCGAAATA CCGGAGCTTCTGGCCCTACGGCTTACCCGGCCGCAGGCCAGGGCCGACAGCCCCGCCCTCATGCTTCTGCGCCGAGTGGC CCCGTACATTCTGCCACTGCATCTGGTAGACCCCAGAGCGGACACCTTTACTCCGGAGCACTGCACCTCTCTGCACGACG TCATGCGCTATGCCCACGAAATGAGCTATGCCGAGATGTTCCAGTTATCAGACAGTGTTACGGAAAACAGCGCCGGTGTT GCCAGCCAGCTTGTAAGCTCTATTCCTCTTGATCTTTATGTAATCGACCTTGGCGGGGGTCTGCGTAATCCCGAAGCGCG GCGCGTGCTGCCCGAAGACGTAACCAGCGTTCCCTTCAGGCATGTGCTCGACGGCATGCTCAATCCCGCAGTGCAGGCCC GCGGTCCCCGGCCGGTCAACATGCGCGGTTTTCTTTCGGTCATGGGGCAAAGCGTCATCGGCTGTAATGAAGAAGGATGC TCGCGCTTCGGCCAGCGCAGTTATGCCATTGTTTCAGACCGTTACCTCAATTTCTCTTCACGTGTCGGCTACCATTATGC CATTCTTGATACCTGGTGCGGCGACACCCTGAGCAAGAACTACATCCGCTTTGAATTCGCGGGCGGGGCCGCAAACAATG TGCAGCGCGTACGCCGGGTGCGCTGCATAGGGCTTATCCTCAAAGAGCTTGGCTTTACCGTTGAGCTTACTGGTGATAGG ATACGGGCACGCTACCAGAAGTATCCACGGCCCGAGCTGTGCTCACGTCTTGACCAGCTGGGGCGCCTGCTTATCATGAC TCGCCAGATGGATATGCTCATGGTAGACGAGGCCGCAGTGACGGCCTATGCCACAAAATTTCTTGAAGGCGAGTATCATT AG
Upstream 100 bases:
>100_bases GTAAAGAAGGACGCGGCCCGGCGCAGCGCTATGTAGTTGTGCAGGGCAGGCCATTTTCCGGCTGATACACGCTTTTTAAC GTCTTATCCGGAGCATATCC
Downstream 100 bases:
>100_bases CCGCAGCTTCCACCGGAGCAGCCGTTGCGCGTCTGCCGCAACGAGCGCGGCATAACGTAATTGAGGCCACATGTCGCCCC TTGCCGCTTCTCCCGTTGAA
Product: pyruvate phosphate dikinase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 853; Mature: 853
Protein sequence:
>853_residues MVGKLKKFFGRKPRISREQAMTAFHRRYASFKELLQANADLAGILAGLNAAQQGERHMETSQVRKEARRAIFRCDRMAAA LNDISGQRHQGLNTSVHSIAGRIEKELDQRTRGDVPSLTLDLTEVDASMAYSVGGKNANLGELRNMLDMPVPRGFAITIK AGTIFLLRTPGLFKSVYSLLRSVDPDKPDSINAVSRQVEKLIREAAVPKEVEDALLKAWDMAYDDDPQVVAALRSSAIAE DGVQSFAGQYRSLLGVTRNDLIPAFKVVVASLFSPRALTYRASHGYALDATGMGLCCVEMVRARAAGVVFSRHPVDLRSN SIVINGLWGLGEMVVDGSGTPDQWLVSRATGKITKTTIAHKAVRLRLVRKVSGVESELAPVPDALRDVPCLSDDQVRRLA DMAMELERHYQYPQDMEWAVDEEDQIILLQTRPMGLDSTAEEKAAPILGHLRPLLSGADVAARGVGCGPVVFVGDGEDIT HFPEGAVMLMDHSSPSAMSAMRRASAIIAQTGSLTGHMASICREFGVPTLMNLPGVTGVLSEGQVITVDALTGRVFDGEI PELLALRLTRPQARADSPALMLLRRVAPYILPLHLVDPRADTFTPEHCTSLHDVMRYAHEMSYAEMFQLSDSVTENSAGV ASQLVSSIPLDLYVIDLGGGLRNPEARRVLPEDVTSVPFRHVLDGMLNPAVQARGPRPVNMRGFLSVMGQSVIGCNEEGC SRFGQRSYAIVSDRYLNFSSRVGYHYAILDTWCGDTLSKNYIRFEFAGGAANNVQRVRRVRCIGLILKELGFTVELTGDR IRARYQKYPRPELCSRLDQLGRLLIMTRQMDMLMVDEAAVTAYATKFLEGEYH
Sequences:
>Translated_853_residues MVGKLKKFFGRKPRISREQAMTAFHRRYASFKELLQANADLAGILAGLNAAQQGERHMETSQVRKEARRAIFRCDRMAAA LNDISGQRHQGLNTSVHSIAGRIEKELDQRTRGDVPSLTLDLTEVDASMAYSVGGKNANLGELRNMLDMPVPRGFAITIK AGTIFLLRTPGLFKSVYSLLRSVDPDKPDSINAVSRQVEKLIREAAVPKEVEDALLKAWDMAYDDDPQVVAALRSSAIAE DGVQSFAGQYRSLLGVTRNDLIPAFKVVVASLFSPRALTYRASHGYALDATGMGLCCVEMVRARAAGVVFSRHPVDLRSN SIVINGLWGLGEMVVDGSGTPDQWLVSRATGKITKTTIAHKAVRLRLVRKVSGVESELAPVPDALRDVPCLSDDQVRRLA DMAMELERHYQYPQDMEWAVDEEDQIILLQTRPMGLDSTAEEKAAPILGHLRPLLSGADVAARGVGCGPVVFVGDGEDIT HFPEGAVMLMDHSSPSAMSAMRRASAIIAQTGSLTGHMASICREFGVPTLMNLPGVTGVLSEGQVITVDALTGRVFDGEI PELLALRLTRPQARADSPALMLLRRVAPYILPLHLVDPRADTFTPEHCTSLHDVMRYAHEMSYAEMFQLSDSVTENSAGV ASQLVSSIPLDLYVIDLGGGLRNPEARRVLPEDVTSVPFRHVLDGMLNPAVQARGPRPVNMRGFLSVMGQSVIGCNEEGC SRFGQRSYAIVSDRYLNFSSRVGYHYAILDTWCGDTLSKNYIRFEFAGGAANNVQRVRRVRCIGLILKELGFTVELTGDR IRARYQKYPRPELCSRLDQLGRLLIMTRQMDMLMVDEAAVTAYATKFLEGEYH >Mature_853_residues MVGKLKKFFGRKPRISREQAMTAFHRRYASFKELLQANADLAGILAGLNAAQQGERHMETSQVRKEARRAIFRCDRMAAA LNDISGQRHQGLNTSVHSIAGRIEKELDQRTRGDVPSLTLDLTEVDASMAYSVGGKNANLGELRNMLDMPVPRGFAITIK AGTIFLLRTPGLFKSVYSLLRSVDPDKPDSINAVSRQVEKLIREAAVPKEVEDALLKAWDMAYDDDPQVVAALRSSAIAE DGVQSFAGQYRSLLGVTRNDLIPAFKVVVASLFSPRALTYRASHGYALDATGMGLCCVEMVRARAAGVVFSRHPVDLRSN SIVINGLWGLGEMVVDGSGTPDQWLVSRATGKITKTTIAHKAVRLRLVRKVSGVESELAPVPDALRDVPCLSDDQVRRLA DMAMELERHYQYPQDMEWAVDEEDQIILLQTRPMGLDSTAEEKAAPILGHLRPLLSGADVAARGVGCGPVVFVGDGEDIT HFPEGAVMLMDHSSPSAMSAMRRASAIIAQTGSLTGHMASICREFGVPTLMNLPGVTGVLSEGQVITVDALTGRVFDGEI PELLALRLTRPQARADSPALMLLRRVAPYILPLHLVDPRADTFTPEHCTSLHDVMRYAHEMSYAEMFQLSDSVTENSAGV ASQLVSSIPLDLYVIDLGGGLRNPEARRVLPEDVTSVPFRHVLDGMLNPAVQARGPRPVNMRGFLSVMGQSVIGCNEEGC SRFGQRSYAIVSDRYLNFSSRVGYHYAILDTWCGDTLSKNYIRFEFAGGAANNVQRVRRVRCIGLILKELGFTVELTGDR IRARYQKYPRPELCSRLDQLGRLLIMTRQMDMLMVDEAAVTAYATKFLEGEYH
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=435, Percent_Identity=31.9540229885057, Blast_Score=204, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17564524, Length=336, Percent_Identity=30.6547619047619, Blast_Score=124, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006318 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 93769; Mature: 93769
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGKLKKFFGRKPRISREQAMTAFHRRYASFKELLQANADLAGILAGLNAAQQGERHMET CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH SQVRKEARRAIFRCDRMAAALNDISGQRHQGLNTSVHSIAGRIEKELDQRTRGDVPSLTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE DLTEVDASMAYSVGGKNANLGELRNMLDMPVPRGFAITIKAGTIFLLRTPGLFKSVYSLL EHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHH RSVDPDKPDSINAVSRQVEKLIREAAVPKEVEDALLKAWDMAYDDDPQVVAALRSSAIAE HHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DGVQSFAGQYRSLLGVTRNDLIPAFKVVVASLFSPRALTYRASHGYALDATGMGLCCVEM HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHH VRARAAGVVFSRHPVDLRSNSIVINGLWGLGEMVVDGSGTPDQWLVSRATGKITKTTIAH HHHHHHCEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHH KAVRLRLVRKVSGVESELAPVPDALRDVPCLSDDQVRRLADMAMELERHYQYPQDMEWAV HHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC DEEDQIILLQTRPMGLDSTAEEKAAPILGHLRPLLSGADVAARGVGCGPVVFVGDGEDIT CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCC HFPEGAVMLMDHSSPSAMSAMRRASAIIAQTGSLTGHMASICREFGVPTLMNLPGVTGVL CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC SEGQVITVDALTGRVFDGEIPELLALRLTRPQARADSPALMLLRRVAPYILPLHLVDPRA CCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCC DTFTPEHCTSLHDVMRYAHEMSYAEMFQLSDSVTENSAGVASQLVSSIPLDLYVIDLGGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCC LRNPEARRVLPEDVTSVPFRHVLDGMLNPAVQARGPRPVNMRGFLSVMGQSVIGCNEEGC CCCCHHHCCCCHHHHCCCHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH SRFGQRSYAIVSDRYLNFSSRVGYHYAILDTWCGDTLSKNYIRFEFAGGAANNVQRVRRV HHHCCCCEEEEHHHHCCHHHCCCEEEEEHHHHCCCHHCCCCEEEEECCCCHHHHHHHHHH RCIGLILKELGFTVELTGDRIRARYQKYPRPELCSRLDQLGRLLIMTRQMDMLMVDEAAV HHHHHHHHHHCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TAYATKFLEGEYH HHHHHHHHCCCCC >Mature Secondary Structure MVGKLKKFFGRKPRISREQAMTAFHRRYASFKELLQANADLAGILAGLNAAQQGERHMET CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHH SQVRKEARRAIFRCDRMAAALNDISGQRHQGLNTSVHSIAGRIEKELDQRTRGDVPSLTL HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE DLTEVDASMAYSVGGKNANLGELRNMLDMPVPRGFAITIKAGTIFLLRTPGLFKSVYSLL EHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCEEEEEECCHHHHHHHHHH RSVDPDKPDSINAVSRQVEKLIREAAVPKEVEDALLKAWDMAYDDDPQVVAALRSSAIAE HHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH DGVQSFAGQYRSLLGVTRNDLIPAFKVVVASLFSPRALTYRASHGYALDATGMGLCCVEM HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEECCCCCHHHHHHH VRARAAGVVFSRHPVDLRSNSIVINGLWGLGEMVVDGSGTPDQWLVSRATGKITKTTIAH HHHHHHCEEEECCCCCCCCCCEEEEECCCCCCEEECCCCCCHHHHHHHHCCCHHHHHHHH KAVRLRLVRKVSGVESELAPVPDALRDVPCLSDDQVRRLADMAMELERHYQYPQDMEWAV HHHHHHHHHHHHCCHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC DEEDQIILLQTRPMGLDSTAEEKAAPILGHLRPLLSGADVAARGVGCGPVVFVGDGEDIT CCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCEEEEECCCCCC HFPEGAVMLMDHSSPSAMSAMRRASAIIAQTGSLTGHMASICREFGVPTLMNLPGVTGVL CCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC SEGQVITVDALTGRVFDGEIPELLALRLTRPQARADSPALMLLRRVAPYILPLHLVDPRA CCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCC DTFTPEHCTSLHDVMRYAHEMSYAEMFQLSDSVTENSAGVASQLVSSIPLDLYVIDLGGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCC LRNPEARRVLPEDVTSVPFRHVLDGMLNPAVQARGPRPVNMRGFLSVMGQSVIGCNEEGC CCCCHHHCCCCHHHHCCCHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHH SRFGQRSYAIVSDRYLNFSSRVGYHYAILDTWCGDTLSKNYIRFEFAGGAANNVQRVRRV HHHCCCCEEEEHHHHCCHHHCCCEEEEEHHHHCCCHHCCCCEEEEECCCCHHHHHHHHHH RCIGLILKELGFTVELTGDRIRARYQKYPRPELCSRLDQLGRLLIMTRQMDMLMVDEAAV HHHHHHHHHHCCEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH TAYATKFLEGEYH HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]