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The map label for this gene is nusG [H]

Identifier: 220904896

GI number: 220904896

Start: 1957590

End: 1958162

Strand: Direct

Name: nusG [H]

Synonym: Ddes_1631

Alternate gene names: 220904896

Gene position: 1957590-1958162 (Clockwise)

Preceding gene: 220904895

Following gene: 220904897

Centisome position: 68.13

GC content: 54.62

Gene sequence:

>573_bases
ATGAAAGATCCTGTTATCGACGAAACTTCCGAGCTGTCGAAAAAAGCTCGCTGGTACATTGTGCACACGTACTCGGGCTT
CGAGCAGCGTGTGCAGAAAACCATTAACGAGTTGCGCCGCACCGGGCAGGAACAAGGCCTGATTGAAGAAGTGGTGGTTC
CTACCGAAAAGGTCATCGAACCTACCAAGGGCGGACAGCAGCGCACTTCTACGCGCAAGTTCTACCCCGGTTATGTGATG
GTGCGCATGGTCATGACCGACCTGTCCTGGCATCTGGTGCAGTCCATACCCAAGGTTACAGGTTTTGTGGGCGGTAAAAA
CCGTCCCACCCCCATGCGTGATGGAGAGGCGGAACGCATTCTGTCACTGATGGAAACACGCCAGGAAACCCCGAGACCCA
AGTTCAACTTTGACAGGGGTGACGAGGTGCGCGTTATTGAAGGGCCTTTTGGAGGCTTTAACGGCGTGGTGGAAGACGTT
AACTACGACAAGGGGAAGCTGCGCGTCTCCGTTTCCATTTTCGGGCGTCAAACGCCGGTGGAACTGGACTTTGCGCAGGT
TTCCAAAGGCTAG

Upstream 100 bases:

>100_bases
TGGCTGTGTTGGGCTTTGTAGCCGTGATGGCCGTCATTTTGGGGTTGGTTGACCTTGGTCTGTCATCCCTGATCAAGACC
ATACTGTCCTGAAGGCCGAT

Downstream 100 bases:

>100_bases
AACCCTTCGTTTCCGAAGGGTTTTTGCGGAAGGGACATATTCCCAGCCCGCACGGCGCGTTGCAGCACCCTTGAGCAGCA
CGCCGGACAAAGTGCCACCT

Product: NusG antitermination factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKDPVIDETSELSKKARWYIVHTYSGFEQRVQKTINELRRTGQEQGLIEEVVVPTEKVIEPTKGGQQRTSTRKFYPGYVM
VRMVMTDLSWHLVQSIPKVTGFVGGKNRPTPMRDGEAERILSLMETRQETPRPKFNFDRGDEVRVIEGPFGGFNGVVEDV
NYDKGKLRVSVSIFGRQTPVELDFAQVSKG

Sequences:

>Translated_190_residues
MKDPVIDETSELSKKARWYIVHTYSGFEQRVQKTINELRRTGQEQGLIEEVVVPTEKVIEPTKGGQQRTSTRKFYPGYVM
VRMVMTDLSWHLVQSIPKVTGFVGGKNRPTPMRDGEAERILSLMETRQETPRPKFNFDRGDEVRVIEGPFGGFNGVVEDV
NYDKGKLRVSVSIFGRQTPVELDFAQVSKG
>Mature_190_residues
MKDPVIDETSELSKKARWYIVHTYSGFEQRVQKTINELRRTGQEQGLIEEVVVPTEKVIEPTKGGQQRTSTRKFYPGYVM
VRMVMTDLSWHLVQSIPKVTGFVGGKNRPTPMRDGEAERILSLMETRQETPRPKFNFDRGDEVRVIEGPFGGFNGVVEDV
NYDKGKLRVSVSIFGRQTPVELDFAQVSKG

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=179, Percent_Identity=53.6312849162011, Blast_Score=198, Evalue=2e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 21653; Mature: 21653

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDPVIDETSELSKKARWYIVHTYSGFEQRVQKTINELRRTGQEQGLIEEVVVPTEKVIE
CCCCCCCCHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCHHCCCHHHHHCCHHHHHC
PTKGGQQRTSTRKFYPGYVMVRMVMTDLSWHLVQSIPKVTGFVGGKNRPTPMRDGEAERI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LSLMETRQETPRPKFNFDRGDEVRVIEGPFGGFNGVVEDVNYDKGKLRVSVSIFGRQTPV
HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEEEEEEEEECCCCCC
ELDFAQVSKG
EECHHHCCCC
>Mature Secondary Structure
MKDPVIDETSELSKKARWYIVHTYSGFEQRVQKTINELRRTGQEQGLIEEVVVPTEKVIE
CCCCCCCCHHHHHHCCEEEEEEECCCHHHHHHHHHHHHHHCCHHCCCHHHHHCCHHHHHC
PTKGGQQRTSTRKFYPGYVMVRMVMTDLSWHLVQSIPKVTGFVGGKNRPTPMRDGEAERI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LSLMETRQETPRPKFNFDRGDEVRVIEGPFGGFNGVVEDVNYDKGKLRVSVSIFGRQTPV
HHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHCCCCCCCEEEEEEEEECCCCCC
ELDFAQVSKG
EECHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]