Click here to switch to the map view.

The map label for this gene is secE

Identifier: 220904895

GI number: 220904895

Start: 1957342

End: 1957581

Strand: Direct

Name: secE

Synonym: Ddes_1630

Alternate gene names: NA

Gene position: 1957342-1957581 (Clockwise)

Preceding gene: 220904894

Following gene: 220904896

Centisome position: 68.12

GC content: 53.33

Gene sequence:

>240_bases
ATGGCAAAAAAACAAGCTCAAGCTGCCGACCTCAAGGCCGATAAAGCCCCCAACGTCTTCGTGCGCTTCGCGCGCTACGT
CGAAGACGCAAAGGCCGAATTGCGCAAAGTGACGTGGCCCACGGTAAAAGAAACACGTAAAGCCACTTTGGCTGTGTTGG
GCTTTGTAGCCGTGATGGCCGTCATTTTGGGGTTGGTTGACCTTGGTCTGTCATCCCTGATCAAGACCATACTGTCCTGA

Upstream 100 bases:

>100_bases
CAGGGCAGTAGCTCTAACGGCTAGAGCGGCGGTCTCCAAAACCGCAAGTTGGGGGTTCGAATCCCTCCTGCCCTGCCATT
TTTTATCTCCGGACAACATC

Downstream 100 bases:

>100_bases
AGGCCGATATGAAAGATCCTGTTATCGACGAAACTTCCGAGCTGTCGAAAAAAGCTCGCTGGTACATTGTGCACACGTAC
TCGGGCTTCGAGCAGCGTGT

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MAKKQAQAADLKADKAPNVFVRFARYVEDAKAELRKVTWPTVKETRKATLAVLGFVAVMAVILGLVDLGLSSLIKTILS

Sequences:

>Translated_79_residues
MAKKQAQAADLKADKAPNVFVRFARYVEDAKAELRKVTWPTVKETRKATLAVLGFVAVMAVILGLVDLGLSSLIKTILS
>Mature_78_residues
AKKQAQAADLKADKAPNVFVRFARYVEDAKAELRKVTWPTVKETRKATLAVLGFVAVMAVILGLVDLGLSSLIKTILS

Specific function: Unknown

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8586; Mature: 8455

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKQAQAADLKADKAPNVFVRFARYVEDAKAELRKVTWPTVKETRKATLAVLGFVAVMA
CCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VILGLVDLGLSSLIKTILS
HHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
AKKQAQAADLKADKAPNVFVRFARYVEDAKAELRKVTWPTVKETRKATLAVLGFVAVMA
CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
VILGLVDLGLSSLIKTILS
HHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA