| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904872
Identifier: 220904872
GI number: 220904872
Start: 1933532
End: 1934110
Strand: Direct
Name: 220904872
Synonym: Ddes_1607
Alternate gene names: NA
Gene position: 1933532-1934110 (Clockwise)
Preceding gene: 220904870
Following gene: 220904873
Centisome position: 67.29
GC content: 59.93
Gene sequence:
>579_bases ATGAGTCACCCCCCGCACAAGCCCCCCCACGAATCTTCAGGCGGGCATGCCCGACACCATGACAACCTGCCTGCCATTCC GCATGACGGTCCACAAGATGGAGACGACAATACCGGCAATGACCGACGCCGTGTGCTTGAGGCAGAGGTCATCCTTGATG ACGGGCAGGAACAGCAGGGCAGGCAGGACCAGACTTACGGCCCCGGCCAGGGGCATGGCGGGGGCAATACCGGCGGCAGG GGCTTTTTTTACAGCCGTAACTTCGGCGGACGCGGTGCAGGAGGCTTTGCGGCAGGTGGGTCGCCTCTGGGACATATATG GGTGTCACAGCGCAATGATGCCAACGCCTGCCTGGCTCCGTGCGTGACCTTTGCCATTTTTCTTGTCTGTCTGGCACAGT TCGGCTTTCTGGCCGGGCTTGGCTTTATTTTTTTTCATACGCTCGGTTCCATTATGGGTACGCTGCGCCAGATGCGCAGC ATGGCTGCGGGCAAGATTCCCAACCCCTGGGCCTGGCGGCTCGGTAACTGGCTGCTTTCTTTTCTTGTAACGGCATGGCT TGCCGGAGGCTTCAACTAG
Upstream 100 bases:
>100_bases GTGAAACAATCCCCCTTGCGCCGCCGGAGAAACAGGCAGCGCAACAGGCGCGCACCTGAATGCAGGTTCAAATGCCTGGA TACAGACCAGGAGGTCGAGC
Downstream 100 bases:
>100_bases CCGGTTTTCCGGCAGCACGAAAAAACATGACATCCGACCTGTGGCTGGTTTACCTGCTGGAATGCGCGGACGGCACCCTG TACTGCGGCATTACCCGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSHPPHKPPHESSGGHARHHDNLPAIPHDGPQDGDDNTGNDRRRVLEAEVILDDGQEQQGRQDQTYGPGQGHGGGNTGGR GFFYSRNFGGRGAGGFAAGGSPLGHIWVSQRNDANACLAPCVTFAIFLVCLAQFGFLAGLGFIFFHTLGSIMGTLRQMRS MAAGKIPNPWAWRLGNWLLSFLVTAWLAGGFN
Sequences:
>Translated_192_residues MSHPPHKPPHESSGGHARHHDNLPAIPHDGPQDGDDNTGNDRRRVLEAEVILDDGQEQQGRQDQTYGPGQGHGGGNTGGR GFFYSRNFGGRGAGGFAAGGSPLGHIWVSQRNDANACLAPCVTFAIFLVCLAQFGFLAGLGFIFFHTLGSIMGTLRQMRS MAAGKIPNPWAWRLGNWLLSFLVTAWLAGGFN >Mature_191_residues SHPPHKPPHESSGGHARHHDNLPAIPHDGPQDGDDNTGNDRRRVLEAEVILDDGQEQQGRQDQTYGPGQGHGGGNTGGRG FFYSRNFGGRGAGGFAAGGSPLGHIWVSQRNDANACLAPCVTFAIFLVCLAQFGFLAGLGFIFFHTLGSIMGTLRQMRSM AAGKIPNPWAWRLGNWLLSFLVTAWLAGGFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20560; Mature: 20429
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHPPHKPPHESSGGHARHHDNLPAIPHDGPQDGDDNTGNDRRRVLEAEVILDDGQEQQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCC RQDQTYGPGQGHGGGNTGGRGFFYSRNFGGRGAGGFAAGGSPLGHIWVSQRNDANACLAP CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH CVTFAIFLVCLAQFGFLAGLGFIFFHTLGSIMGTLRQMRSMAAGKIPNPWAWRLGNWLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FLVTAWLAGGFN HHHHHHHHCCCC >Mature Secondary Structure SHPPHKPPHESSGGHARHHDNLPAIPHDGPQDGDDNTGNDRRRVLEAEVILDDGQEQQG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCC RQDQTYGPGQGHGGGNTGGRGFFYSRNFGGRGAGGFAAGGSPLGHIWVSQRNDANACLAP CCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHH CVTFAIFLVCLAQFGFLAGLGFIFFHTLGSIMGTLRQMRSMAAGKIPNPWAWRLGNWLLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH FLVTAWLAGGFN HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA