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The map label for this gene is yhbQ [C]

Identifier: 220904873

GI number: 220904873

Start: 1934137

End: 1934412

Strand: Direct

Name: yhbQ [C]

Synonym: Ddes_1608

Alternate gene names: 220904873

Gene position: 1934137-1934412 (Clockwise)

Preceding gene: 220904872

Following gene: 220904874

Centisome position: 67.31

GC content: 62.68

Gene sequence:

>276_bases
ATGACATCCGACCTGTGGCTGGTTTACCTGCTGGAATGCGCGGACGGCACCCTGTACTGCGGCATTACCCGTCATATGGA
ACGCCGCCTTGCGCAGCATAACGGCACCATATCCGGCGGCGCACGCTATACGCGCGGGCGGCGTCCGGTGTGCCTGCTGG
CCAGCAGGTCCTGCGCATGCATGGCCGATGCCCTGCGCCTTGAACGTGCGGTCAAAGCCCGCCCGCGCCACAAAAAAAAA
TCCTACCTGCTGCACGGAGATGCCGAACAATGCTGA

Upstream 100 bases:

>100_bases
CCTGGGCCTGGCGGCTCGGTAACTGGCTGCTTTCTTTTCTTGTAACGGCATGGCTTGCCGGAGGCTTCAACTAGCCGGTT
TTCCGGCAGCACGAAAAAAC

Downstream 100 bases:

>100_bases
CCGTGGATGTTGCTCTGGCGTTTTTCGCCGCCTCCCTTCTTCTTGGCATCGCCCCCGGGCCGGACAATATTTTTGTGCTC
ACGCAGTCCGCAGTTTACGG

Product: Excinuclease ABC C subunit domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 91; Mature: 90

Protein sequence:

>91_residues
MTSDLWLVYLLECADGTLYCGITRHMERRLAQHNGTISGGARYTRGRRPVCLLASRSCACMADALRLERAVKARPRHKKK
SYLLHGDAEQC

Sequences:

>Translated_91_residues
MTSDLWLVYLLECADGTLYCGITRHMERRLAQHNGTISGGARYTRGRRPVCLLASRSCACMADALRLERAVKARPRHKKK
SYLLHGDAEQC
>Mature_90_residues
TSDLWLVYLLECADGTLYCGITRHMERRLAQHNGTISGGARYTRGRRPVCLLASRSCACMADALRLERAVKARPRHKKKS
YLLHGDAEQC

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10279; Mature: 10148

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
9.9 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSDLWLVYLLECADGTLYCGITRHMERRLAQHNGTISGGARYTRGRRPVCLLASRSCAC
CCCCHHEEHEEECCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHH
MADALRLERAVKARPRHKKKSYLLHGDAEQC
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure 
TSDLWLVYLLECADGTLYCGITRHMERRLAQHNGTISGGARYTRGRRPVCLLASRSCAC
CCCHHEEHEEECCCCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCHH
MADALRLERAVKARPRHKKKSYLLHGDAEQC
HHHHHHHHHHHHCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA