| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is engA [H]
Identifier: 220904745
GI number: 220904745
Start: 1767304
End: 1768668
Strand: Direct
Name: engA [H]
Synonym: Ddes_1477
Alternate gene names: 220904745
Gene position: 1767304-1768668 (Clockwise)
Preceding gene: 220904744
Following gene: 220904746
Centisome position: 61.5
GC content: 60.07
Gene sequence:
>1365_bases ATGGCTGAAACTCTACCCCGCATCATTCTCGTGGGTCGCCCCAATGTGGGCAAGTCCACCCTGTTCAACCGCCTCATCCG CAGCAACCGCGCCATCACCCACGACCGCCCCGGCGTCACCCGCGACCGCATGGAAGGGGTGGTGCGCCGCAAGGGACTGC CGGCCTTCGGTATTGTAGACACAGGCGGCATCACCCTTGACGCCCATGCCATGGTCGTTGAAGGTCCCGAAGGCATCCGC GGCTTTGAGCAGGATATCCTCGACCAGACCGAGGCCGCCATGAAAGACGCTGCGGCTGTGGCCTTTGTGGTAGACGGCCG CGACGGCCTGCTGCCGCTGGACGAGCACCTTGCCGCCCACGTGCGCCGCAAGGGCCTGCCCACCATTTGCGTTGTCAACA AGGTGGACGGAGCCGAACGCGAAGACGAACAGCTGGCAGAATTTCACATACTGGGCTTTCCCCTGTTGGCTGTCTCTGCC GAGCACGGGCACAATATCCGCGCCCTTGTGGAGGATCTGGCCGACCTGCTGCCCGAAGAGTCTTCCGAAGAGCCTCCGGC CCCCCCGGCGCTGCGCCTGGCCATGCTCGGCCGCCCCAATGCGGGCAAGTCTTCGCTCATCAACGCCCTTTCCGGCGAAG AGCGCATGATCGTTTCCGATGTGGCCGGCACCACCCGCGACAGCGTTGACGTACGCTTCTGCCGTAATGGCAAGGACTAT GTCTTTGTTGACACGGCCGGTGTCCGGCGGCGCACCAAAATCACAGACAGCGTAGAGAAATACTCTGTAAATTCGGCCAT CAAATCCAGCACAAAGGCAGATGTGACCCTGCTGACCCTGGATGCGGCCGAAGGCGTGAGCCAGCAGGACAAACGCCTGA TGGACATGCTTAATACCCGTAAAACGCCGTTTATGGTCCTTATCAACAAGTGTGACCTCGCCCCCCGGAACGCTCTGGAC CAACTGAAAAAAAATATCAGCCAGATGCTGGCATTCTGCCCCCATGTGCCGGTCATGCCCGTTTCCGCTCTTACCGGCAA AGATCTGGAAAAAATACTGCCTCTGGCGCAACGCATTCACGAAGAATGCAGCATCCGCATCCCCACAGGACGACTCAACA GGGCTATGGAAGAAGTGCTTACCCGCCACCAGCCTCCTGTGGTCAAAAGGGCGCGGGCCAAATTTTTCTATCTCACCCAG GCCGAATCCGAGCCGCCGACGTTTGTCTTCTTTGTGAGCGACGCCACGCGCGTACCCGAGAGCTATAGCCGCTACCTTGA GCGCGCGCTGCGAAAGATTTTCGGCATCGTCCATGCGCCCATGCGCCTGCACCTGCGGTCCAGCCACAAGAAAAAAGAGA AATAG
Upstream 100 bases:
>100_bases CAATTTCTCTTTTACATTAGGGTCCGCACAGGCGGGCCTTTCAAAAAGCGCCCCGCGAGAGCCCGCCGCCTTGCGTCAGG GACGCAACAAGGTTACCGCC
Downstream 100 bases:
>100_bases ACCGGCCATTACGCGTAAAAAACTGCCCGAAAGCGAAAAAACATCCTGTTTTTCACGAGGCGGCCCAGATGCATTTGCAG CATCCGGGCCGCCTCTGCCG
Product: GTP-binding protein EngA
Products: NA
Alternate protein names: GTP-binding protein EngA [H]
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MAETLPRIILVGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGVVRRKGLPAFGIVDTGGITLDAHAMVVEGPEGIR GFEQDILDQTEAAMKDAAAVAFVVDGRDGLLPLDEHLAAHVRRKGLPTICVVNKVDGAEREDEQLAEFHILGFPLLAVSA EHGHNIRALVEDLADLLPEESSEEPPAPPALRLAMLGRPNAGKSSLINALSGEERMIVSDVAGTTRDSVDVRFCRNGKDY VFVDTAGVRRRTKITDSVEKYSVNSAIKSSTKADVTLLTLDAAEGVSQQDKRLMDMLNTRKTPFMVLINKCDLAPRNALD QLKKNISQMLAFCPHVPVMPVSALTGKDLEKILPLAQRIHEECSIRIPTGRLNRAMEEVLTRHQPPVVKRARAKFFYLTQ AESEPPTFVFFVSDATRVPESYSRYLERALRKIFGIVHAPMRLHLRSSHKKKEK
Sequences:
>Translated_454_residues MAETLPRIILVGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGVVRRKGLPAFGIVDTGGITLDAHAMVVEGPEGIR GFEQDILDQTEAAMKDAAAVAFVVDGRDGLLPLDEHLAAHVRRKGLPTICVVNKVDGAEREDEQLAEFHILGFPLLAVSA EHGHNIRALVEDLADLLPEESSEEPPAPPALRLAMLGRPNAGKSSLINALSGEERMIVSDVAGTTRDSVDVRFCRNGKDY VFVDTAGVRRRTKITDSVEKYSVNSAIKSSTKADVTLLTLDAAEGVSQQDKRLMDMLNTRKTPFMVLINKCDLAPRNALD QLKKNISQMLAFCPHVPVMPVSALTGKDLEKILPLAQRIHEECSIRIPTGRLNRAMEEVLTRHQPPVVKRARAKFFYLTQ AESEPPTFVFFVSDATRVPESYSRYLERALRKIFGIVHAPMRLHLRSSHKKKEK >Mature_453_residues AETLPRIILVGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGVVRRKGLPAFGIVDTGGITLDAHAMVVEGPEGIRG FEQDILDQTEAAMKDAAAVAFVVDGRDGLLPLDEHLAAHVRRKGLPTICVVNKVDGAEREDEQLAEFHILGFPLLAVSAE HGHNIRALVEDLADLLPEESSEEPPAPPALRLAMLGRPNAGKSSLINALSGEERMIVSDVAGTTRDSVDVRFCRNGKDYV FVDTAGVRRRTKITDSVEKYSVNSAIKSSTKADVTLLTLDAAEGVSQQDKRLMDMLNTRKTPFMVLINKCDLAPRNALDQ LKKNISQMLAFCPHVPVMPVSALTGKDLEKILPLAQRIHEECSIRIPTGRLNRAMEEVLTRHQPPVVKRARAKFFYLTQA ESEPPTFVFFVSDATRVPESYSRYLERALRKIFGIVHAPMRLHLRSSHKKKEK
Specific function: GTPase that plays an essential role in the late steps of ribosome biogenesis [H]
COG id: COG1160
COG function: function code R; Predicted GTPases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH-like domain [H]
Homologues:
Organism=Escherichia coli, GI87082120, Length=470, Percent_Identity=35.7446808510638, Blast_Score=286, Evalue=2e-78, Organism=Escherichia coli, GI2367268, Length=127, Percent_Identity=35.4330708661417, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788919, Length=183, Percent_Identity=29.5081967213115, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17507259, Length=131, Percent_Identity=32.0610687022901, Blast_Score=66, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6323665, Length=167, Percent_Identity=29.3413173652695, Blast_Score=87, Evalue=4e-18, Organism=Drosophila melanogaster, GI45550813, Length=169, Percent_Identity=34.9112426035503, Blast_Score=71, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016484 - InterPro: IPR015946 - InterPro: IPR002917 - InterPro: IPR005225 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 50331; Mature: 50200
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETLPRIILVGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGVVRRKGLPAFGIVD CCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE TGGITLDAHAMVVEGPEGIRGFEQDILDQTEAAMKDAAAVAFVVDGRDGLLPLDEHLAAH CCCEEEECEEEEEECCHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHH VRRKGLPTICVVNKVDGAEREDEQLAEFHILGFPLLAVSAEHGHNIRALVEDLADLLPEE HHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHCCCC SSEEPPAPPALRLAMLGRPNAGKSSLINALSGEERMIVSDVAGTTRDSVDVRFCRNGKDY CCCCCCCCHHHEEEECCCCCCCHHHHHHHHCCCCEEEEEHHCCCCCCCCEEEEECCCCCE VFVDTAGVRRRTKITDSVEKYSVNSAIKSSTKADVTLLTLDAAEGVSQQDKRLMDMLNTR EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC KTPFMVLINKCDLAPRNALDQLKKNISQMLAFCPHVPVMPVSALTGKDLEKILPLAQRIH CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHH EECSIRIPTGRLNRAMEEVLTRHQPPVVKRARAKFFYLTQAESEPPTFVFFVSDATRVPE HHCEEECCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEECCCCCCEEEEEECCCCCCCH SYSRYLERALRKIFGIVHAPMRLHLRSSHKKKEK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure AETLPRIILVGRPNVGKSTLFNRLIRSNRAITHDRPGVTRDRMEGVVRRKGLPAFGIVD CCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEE TGGITLDAHAMVVEGPEGIRGFEQDILDQTEAAMKDAAAVAFVVDGRDGLLPLDEHLAAH CCCEEEECEEEEEECCHHCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHH VRRKGLPTICVVNKVDGAEREDEQLAEFHILGFPLLAVSAEHGHNIRALVEDLADLLPEE HHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCCHHEEEECCCCCCHHHHHHHHHHHCCCC SSEEPPAPPALRLAMLGRPNAGKSSLINALSGEERMIVSDVAGTTRDSVDVRFCRNGKDY CCCCCCCCHHHEEEECCCCCCCHHHHHHHHCCCCEEEEEHHCCCCCCCCEEEEECCCCCE VFVDTAGVRRRTKITDSVEKYSVNSAIKSSTKADVTLLTLDAAEGVSQQDKRLMDMLNTR EEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCC KTPFMVLINKCDLAPRNALDQLKKNISQMLAFCPHVPVMPVSALTGKDLEKILPLAQRIH CCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHHHH EECSIRIPTGRLNRAMEEVLTRHQPPVVKRARAKFFYLTQAESEPPTFVFFVSDATRVPE HHCEEECCCHHHHHHHHHHHHCCCCCHHHHHCCEEEEEEECCCCCCEEEEEECCCCCCCH SYSRYLERALRKIFGIVHAPMRLHLRSSHKKKEK HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA