| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is braC [H]
Identifier: 220904746
GI number: 220904746
Start: 1768920
End: 1770050
Strand: Direct
Name: braC [H]
Synonym: Ddes_1478
Alternate gene names: 220904746
Gene position: 1768920-1770050 (Clockwise)
Preceding gene: 220904745
Following gene: 220904747
Centisome position: 61.56
GC content: 58.8
Gene sequence:
>1131_bases ATGAAAAAAGGTATAACCTTGCTTGCGGCAATGGCACTCTGCGCGGTTCTGGCCGCCCCCGCTCAGGCGGAAGACACCAT CAAAATCGGTGTCGCCGGTGCTCACTCCGGCGATCTGGCCTCCTACGGCGTACCCAGCCTAAACGCTGCCAAGGTGGTCA TTGCCGATGTCAACGCCAAGGGCGGCATACTCGGCAAGCAGGTCGAACTGGTAGCCCAGGATGACCAGTGCAAACCCGAA CTGGCTACCAACGCGGCCACCAAGCTCATCTCCGACAAGGTGGCTGTGGTGATGGGGCATATCTGCTCCGGCGCCACCAA GGCCACACTGCCCCTGTATACCGATGCCAAAATCGTGAGCATGTCGCCCTCTGCCACCACTCCCGGTCTCACCGAAGACG GCAACAACCCGTACTTCTTCCGCACCATCGCCAATGACAAGGCCCAGGCCAGGTTGACCAGCGACTTCATGCTCAACAAC CTCAAGGTCAAAAAGGTTGCCTATCTGCATGATAACGGCGACTACGGCAAAGGCTTTGTGGACAATAACCGCGAGCACCT CGAAAAGGCTGGCGTCAAAACAGTTCTGTTTGAAGCCATTACCCCCGATGCCGTGGACTTTTCCGCTGTTGTGCGCAAAC TGAGACGCGAACAGCCCGACATCGTGGTTTTCGGCGGGTATCAGCCCACGGCCTCCAAGCTGTTGCAGCAGATGCGTCGC GACCGCGTGACCACCGCCCTGCTCGGCCCTGACGGGCTTATGGACGAGGCCTTCATCAAGATGGCCGGCAAGGCCAGCGA AGGCGTGTACTCTTCCTACCCCAAAGACACCAGCAATCTGCCCGCTTACAGGGCCGCCCGTGAAGGCCACGTAAAGATGT TCGGCAAGGATCCCGGCTCGTTCTACTACAACGGCTATGCCGCCACCCAGGCTCTGGTCAATGCCATTGAAAAGGCCGGC AGCACCGACACAGCCAAGGTTGTGGATGCCCTGCGCTCCGCACCTGTGGATACCCCGCTGGGCACCCTGACTTTCAGCAA AACCGGCGATGCCGCCGGCATGGCTCTTTCCATCTATCAGGTCAAAGACGGAAAATTTGTGGAACTCGACCACAGCATCG TCCTTGAGTAG
Upstream 100 bases:
>100_bases CAACCCGCATTGACAGGCCGCCCGCAATAAGGCAATAGAGAAGCCTTCATCCATTTTGAAGCGCAAAATACGCGCGACAA TTTTCTCGTAGGAGGGGCTG
Downstream 100 bases:
>100_bases TTGATCAAGGGGGCGCGACCATGGTCGCGCCCCCGTTTTCGCACACACTTTCGGCTTCGGCCGACGGCAATAACGGAACT GACGCCGGGAGCATGGCATT
Product: Extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: LIVAT-BP; Leu/Ile/Val/Thr/Ala-binding protein [H]
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAKGGILGKQVELVAQDDQCKPE LATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVSMSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNN LKVKKVAYLHDNGDYGKGFVDNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDPGSFYYNGYAATQALVNAIEKAG STDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIYQVKDGKFVELDHSIVLE
Sequences:
>Translated_376_residues MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAKGGILGKQVELVAQDDQCKPE LATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVSMSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNN LKVKKVAYLHDNGDYGKGFVDNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDPGSFYYNGYAATQALVNAIEKAG STDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIYQVKDGKFVELDHSIVLE >Mature_376_residues MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAKGGILGKQVELVAQDDQCKPE LATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVSMSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNN LKVKKVAYLHDNGDYGKGFVDNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDPGSFYYNGYAATQALVNAIEKAG STDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIYQVKDGKFVELDHSIVLE
Specific function: Component of the high-affinity leucine, isoleucine, valine transport system I (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1789867, Length=361, Percent_Identity=33.5180055401662, Blast_Score=217, Evalue=9e-58, Organism=Escherichia coli, GI48994941, Length=360, Percent_Identity=34.7222222222222, Blast_Score=216, Evalue=2e-57,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39899; Mature: 39899
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAK CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEECCCC GGILGKQVELVAQDDQCKPELATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVS CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEE MSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNNLKVKKVAYLHDNGDYGKGFV ECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCC DNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR CCCHHHHHHCCHHHEEHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDPGS HHHEEEEECCCCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHCCCCCEEEEECCCCC FYYNGYAATQALVNAIEKAGSTDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIYQ EEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEE VKDGKFVELDHSIVLE ECCCCEEEECCEEECC >Mature Secondary Structure MKKGITLLAAMALCAVLAAPAQAEDTIKIGVAGAHSGDLASYGVPSLNAAKVVIADVNAK CCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHCCCCCCCCCEEEEEECCCC GGILGKQVELVAQDDQCKPELATNAATKLISDKVAVVMGHICSGATKATLPLYTDAKIVS CCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEE MSPSATTPGLTEDGNNPYFFRTIANDKAQARLTSDFMLNNLKVKKVAYLHDNGDYGKGFV ECCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCC DNNREHLEKAGVKTVLFEAITPDAVDFSAVVRKLRREQPDIVVFGGYQPTASKLLQQMRR CCCHHHHHHCCHHHEEHHHCCCCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHH DRVTTALLGPDGLMDEAFIKMAGKASEGVYSSYPKDTSNLPAYRAAREGHVKMFGKDPGS HHHEEEEECCCCCHHHHHHHHCCCCCCCCHHCCCCCCCCCCHHHHCCCCCEEEEECCCCC FYYNGYAATQALVNAIEKAGSTDTAKVVDALRSAPVDTPLGTLTFSKTGDAAGMALSIYQ EEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCCCCEEEEEEE VKDGKFVELDHSIVLE ECCCCEEEECCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2509433; 2120183; 10984043 [H]