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The map label for this gene is ddh [H]

Identifier: 220904390

GI number: 220904390

Start: 1314624

End: 1315547

Strand: Direct

Name: ddh [H]

Synonym: Ddes_1119

Alternate gene names: 220904390

Gene position: 1314624-1315547 (Clockwise)

Preceding gene: 220904389

Following gene: 220904395

Centisome position: 45.75

GC content: 55.84

Gene sequence:

>924_bases
ATGAGCACAGTCAAGGTTGCAGTGCACGGACTGGGCAATATCGGCAAGGCTGTCATTGATTGTCTGCTTTGCACCCGGGA
TATTGATTGCCTTGGTGTGGTGAGGCGTGCTTCTTCCTTGGGTACCCAGCCGTTATCTTTGCGGGGAGTGCCGGATTATG
CCTCCATTGATGCACTGATGGCGGAGCGTGGCAGGCCGGATGTTGTAATAATTTGCGGCCCATCCAGAAATGTGCCTGTG
GACGCGCGCTACTATATGGAAAAAAACATCAGCACCGTTGACAGTTTCGACATCCATTCTGAAATCCCGCAAGTTGTCGC
AGCATTGGACAGTGCAGCCAAGGCTGCGGGCAAGGCGTGCATAACGGCGGCAGGGTGGGACCCGGGAACAGATTCTGTCC
TGCGTGCGCTTTTTGAAGCCATGACGCCTGTAGGAACAACTTTCACCAACTTTGGCCGGGGACGTTCCATGGGCCATTCC
GTAGCCGCAAGGGCTGTTTCCGGTGTGGAAAACGCCTGCTCCATCACCATTCCCATTGGTGGTGGCAAGCATTCGCGTCT
GGTCTACGTTCTTCCCGCTGCCGGAGCTTCTTTTGCCGATATCAAGCAACGGATTGCCGCAGATCCGTATTTCAGCAATG
ATCCGCTGGACGTGCGTGAAGTCGGCAGCCAGGAAGAACTGGATGCTGTGGCCGACAACTCTCATGGCGTACTTATGGAG
CGCATCGGCGCTTCCGGAAGCGTTTCCAACCAGCGGCTGAGTTTTGATATGCGAATTGATAATCCGGCCCTGACGGCGCA
GGTTCTGGTATCGTGCGCACGGGCTGTCACGCGGCTGAATCCCGGTTGCCATACGCTGATTGACGTACCCCCGGTGGCTT
TGTTGCCCGGCGACCGCATGAAAAATATTGCCCGGTTGGTTTGA

Upstream 100 bases:

>100_bases
CTAGAGCGCGTGGCGGGATTTTTTCAAACAGGCAGACCGAGAGCATATGATTTTTATAATCTGCGTTTGCACATGAAAAC
AAAGAAAACAGGAGGAACAT

Downstream 100 bases:

>100_bases
CGGCACTTCCAAACCGCATGTTTTGATGACAGGATGTATCTTTTCTCACTGTGTTGCGCATCACGTGCATGAATGCGCAA
CACAGTGAGAATATTTTTTC

Product: diaminopimelate dehydrogenase

Products: NA

Alternate protein names: Meso-DAP dehydrogenase [H]

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MSTVKVAVHGLGNIGKAVIDCLLCTRDIDCLGVVRRASSLGTQPLSLRGVPDYASIDALMAERGRPDVVIICGPSRNVPV
DARYYMEKNISTVDSFDIHSEIPQVVAALDSAAKAAGKACITAAGWDPGTDSVLRALFEAMTPVGTTFTNFGRGRSMGHS
VAARAVSGVENACSITIPIGGGKHSRLVYVLPAAGASFADIKQRIAADPYFSNDPLDVREVGSQEELDAVADNSHGVLME
RIGASGSVSNQRLSFDMRIDNPALTAQVLVSCARAVTRLNPGCHTLIDVPPVALLPGDRMKNIARLV

Sequences:

>Translated_307_residues
MSTVKVAVHGLGNIGKAVIDCLLCTRDIDCLGVVRRASSLGTQPLSLRGVPDYASIDALMAERGRPDVVIICGPSRNVPV
DARYYMEKNISTVDSFDIHSEIPQVVAALDSAAKAAGKACITAAGWDPGTDSVLRALFEAMTPVGTTFTNFGRGRSMGHS
VAARAVSGVENACSITIPIGGGKHSRLVYVLPAAGASFADIKQRIAADPYFSNDPLDVREVGSQEELDAVADNSHGVLME
RIGASGSVSNQRLSFDMRIDNPALTAQVLVSCARAVTRLNPGCHTLIDVPPVALLPGDRMKNIARLV
>Mature_306_residues
STVKVAVHGLGNIGKAVIDCLLCTRDIDCLGVVRRASSLGTQPLSLRGVPDYASIDALMAERGRPDVVIICGPSRNVPVD
ARYYMEKNISTVDSFDIHSEIPQVVAALDSAAKAAGKACITAAGWDPGTDSVLRALFEAMTPVGTTFTNFGRGRSMGHSV
AARAVSGVENACSITIPIGGGKHSRLVYVLPAAGASFADIKQRIAADPYFSNDPLDVREVGSQEELDAVADNSHGVLMER
IGASGSVSNQRLSFDMRIDNPALTAQVLVSCARAVTRLNPGCHTLIDVPPVALLPGDRMKNIARLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000846
- InterPro:   IPR010190
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01113 DapB_N [H]

EC number: =1.4.1.16 [H]

Molecular weight: Translated: 32322; Mature: 32191

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTVKVAVHGLGNIGKAVIDCLLCTRDIDCLGVVRRASSLGTQPLSLRGVPDYASIDALM
CCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH
AERGRPDVVIICGPSRNVPVDARYYMEKNISTVDSFDIHSEIPQVVAALDSAAKAAGKAC
HHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
ITAAGWDPGTDSVLRALFEAMTPVGTTFTNFGRGRSMGHSVAARAVSGVENACSITIPIG
EEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEC
GGKHSRLVYVLPAAGASFADIKQRIAADPYFSNDPLDVREVGSQEELDAVADNSHGVLME
CCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCHHHH
RIGASGSVSNQRLSFDMRIDNPALTAQVLVSCARAVTRLNPGCHTLIDVPPVALLPGDRM
HCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHH
KNIARLV
HHHHHCC
>Mature Secondary Structure 
STVKVAVHGLGNIGKAVIDCLLCTRDIDCLGVVRRASSLGTQPLSLRGVPDYASIDALM
CCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHH
AERGRPDVVIICGPSRNVPVDARYYMEKNISTVDSFDIHSEIPQVVAALDSAAKAAGKAC
HHCCCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
ITAAGWDPGTDSVLRALFEAMTPVGTTFTNFGRGRSMGHSVAARAVSGVENACSITIPIG
EEECCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEC
GGKHSRLVYVLPAAGASFADIKQRIAADPYFSNDPLDVREVGSQEELDAVADNSHGVLME
CCCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHCCCCCHHHH
RIGASGSVSNQRLSFDMRIDNPALTAQVLVSCARAVTRLNPGCHTLIDVPPVALLPGDRM
HCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEECCCHHH
KNIARLV
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3588313; 12948626; 8885833; 9521647 [H]