| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is crcB
Identifier: 220904395
GI number: 220904395
Start: 1325985
End: 1326374
Strand: Direct
Name: crcB
Synonym: Ddes_1125
Alternate gene names: 220904395
Gene position: 1325985-1326374 (Clockwise)
Preceding gene: 220904390
Following gene: 220904396
Centisome position: 46.15
GC content: 51.79
Gene sequence:
>390_bases ATGCTTAAAACGCTTGCCCTCATAAGTATTGGGGCATCTTGCGGAGCCATCTTGCGGTGGTTTCTGGGGTTGATGCTGAA CGCCATATTTCTTCCCATACCGCTTGGAACCCTGGCGGCCAACCTGCTTGGCGGGTATCTCATCGGTGTGGCTGTCAGTA TGTTCAATGCGCTGTCTGCGGTAGGGCCGGAATTTAGGTTGCTCATCATTACCGGGTTTCTTGGCGGCTTGACGACTTTT TCAACATTTACAGCGGAAATCGGCGTTCTTTTGCAAGGCCAGCGCATCATGACTGCCGTGGCAGCCATAGTACTGCATGT TTGCGGCTCACTTATTATGATGCTGCTCGGCATGGGGACGTTTGCGTTATTACGGACCTGTTTTCGATAG
Upstream 100 bases:
>100_bases GGCTGCTTTTGTTTTTTCGGGAGTATGCTCTGCTCTGGCGGCTGCCCTTTTAAAAGGACTTGTAGTGCCTGTGCGCACGT GATGACAGACGGAGAATTGT
Downstream 100 bases:
>100_bases GGGAACATATGCACGGCTATCAGCTTACGTTTTTTACGCAGCAGGGACGCGTTCACGGCATGGTAAACCTTGCAGAGTGG CTGCTCCAGCAGGCAAAGGC
Product: CrcB protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MLKTLALISIGASCGAILRWFLGLMLNAIFLPIPLGTLAANLLGGYLIGVAVSMFNALSAVGPEFRLLIITGFLGGLTTF STFTAEIGVLLQGQRIMTAVAAIVLHVCGSLIMMLLGMGTFALLRTCFR
Sequences:
>Translated_129_residues MLKTLALISIGASCGAILRWFLGLMLNAIFLPIPLGTLAANLLGGYLIGVAVSMFNALSAVGPEFRLLIITGFLGGLTTF STFTAEIGVLLQGQRIMTAVAAIVLHVCGSLIMMLLGMGTFALLRTCFR >Mature_129_residues MLKTLALISIGASCGAILRWFLGLMLNAIFLPIPLGTLAANLLGGYLIGVAVSMFNALSAVGPEFRLLIITGFLGGLTTF STFTAEIGVLLQGQRIMTAVAAIVLHVCGSLIMMLLGMGTFALLRTCFR
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=122, Percent_Identity=40.9836065573771, Blast_Score=94, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_DESDA (B8IZV2)
Other databases:
- EMBL: CP001358 - RefSeq: YP_002479707.1 - GeneID: 7284807 - GenomeReviews: CP001358_GR - KEGG: dds:Ddes_1125 - HOGENOM: HBG753179 - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 13550; Mature: 13550
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x261c3264)-; HASH(0x26f10d78)-; HASH(0x404d178c)-; HASH(0x273ea014)-;
Cys/Met content:
2.3 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 5.4 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLALISIGASCGAILRWFLGLMLNAIFLPIPLGTLAANLLGGYLIGVAVSMFNALSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGPEFRLLIITGFLGGLTTFSTFTAEIGVLLQGQRIMTAVAAIVLHVCGSLIMMLLGMGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH FALLRTCFR HHHHHHHCH >Mature Secondary Structure MLKTLALISIGASCGAILRWFLGLMLNAIFLPIPLGTLAANLLGGYLIGVAVSMFNALSA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH VGPEFRLLIITGFLGGLTTFSTFTAEIGVLLQGQRIMTAVAAIVLHVCGSLIMMLLGMGT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCH FALLRTCFR HHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA