Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904370

Identifier: 220904370

GI number: 220904370

Start: 1290224

End: 1290655

Strand: Direct

Name: 220904370

Synonym: Ddes_1098

Alternate gene names: NA

Gene position: 1290224-1290655 (Clockwise)

Preceding gene: 220904369

Following gene: 220904371

Centisome position: 44.9

GC content: 50.46

Gene sequence:

>432_bases
GTGAAAAAGTCAGTTTTGAGCCTTGGGCTGGTTCTTGCTCTGGTTCTGGTCTGCGCTCCCGTTCGCGCTGCGGAAGTCGC
TGCTGGCGATGTAGCACAAAATAATCCCGTGGAACAGCTTACGGGACATGTATGGCAAAAAACCAGCGAGACTGATAAGG
CCGCATTCCTGCTTGGTGTGGAATCCGCTATTACCGTAGAATATTTTGTTAATGCCAAACTGGCGGAAAAAGCTGCCAAA
TCCGGCAAAAAACCTGCTTATACCCTTTCGCCTTTTGAAAAGGGCTGGATGAATGCCTTCAAGGGAGTCAACCGTGCTGA
GATTATCACCATGGTAGACCAGTGGTACGCTGCCAATCCCGACAGGCTTGACCGTCCGGTAATGAGCGTTATCTGGTATG
AACTGATCGCCCCCCGCATTGCCAAGAAGTAA

Upstream 100 bases:

>100_bases
TACTTGATATACAGGTATGCTTGTGGCTAAAGTACATTCACTGTACGAGGTTTTTACTGGCGGCGCATGCCGCCTCGCCT
TAAACTGCAAGGAGCTTCGC

Downstream 100 bases:

>100_bases
GGTACCTGCCCTTGGGGCGATAACAGGACTCAGGAGAATAGCCATGAAGAAAGCTTTGATTATAGGCCTGTTGGCCGTCA
TGTTTACCAGTGGCGTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGVESAITVEYFVNAKLAEKAAK
SGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANPDRLDRPVMSVIWYELIAPRIAKK

Sequences:

>Translated_143_residues
MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGVESAITVEYFVNAKLAEKAAK
SGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANPDRLDRPVMSVIWYELIAPRIAKK
>Mature_143_residues
MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGVESAITVEYFVNAKLAEKAAK
SGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANPDRLDRPVMSVIWYELIAPRIAKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15675; Mature: 15675

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGV
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEC
ESAITVEYFVNAKLAEKAAKSGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANP
CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
DRLDRPVMSVIWYELIAPRIAKK
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKSVLSLGLVLALVLVCAPVRAAEVAAGDVAQNNPVEQLTGHVWQKTSETDKAAFLLGV
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEC
ESAITVEYFVNAKLAEKAAKSGKKPAYTLSPFEKGWMNAFKGVNRAEIITMVDQWYAANP
CHHHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
DRLDRPVMSVIWYELIAPRIAKK
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA