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The map label for this gene is 220904289

Identifier: 220904289

GI number: 220904289

Start: 1189611

End: 1190558

Strand: Direct

Name: 220904289

Synonym: Ddes_1016

Alternate gene names: NA

Gene position: 1189611-1190558 (Clockwise)

Preceding gene: 220904288

Following gene: 220904290

Centisome position: 41.4

GC content: 39.03

Gene sequence:

>948_bases
ATGCCGGCTTCTCCAACTGACATGATTCTGAAAAAACTCCAGCGTAAAATGTATGAAGCGGAGCACTATAAACGTCTCTG
GCAGGGCACCCGGGCGCAGCTTGATTATTTGAAAGAACATGCCGATATCACCAGGCTCAAGCCTGCAACGGGAAAATTGA
GGCAGGAGCAGCTGGAACTGGTTGATGTTTGTAATAATTTTTTTGAAGAGATCAAGGAACTCGATATCAAACCGTTTTTA
ATCGCGGGGAATTTGCTGGGGGCCGTGCGGCATAAAGGTTTTATTCCCTGGGATGATGATCTGGATTTTGGCCTGATGCG
GGAAGACTACACGAAGCTGGTCAATTTTTGCAAAAAAAAGTATGTTGTTACTGATTATACAAAAAATTATAAAAAGAGTG
AGTGGAACTACGTTACCGGGTACAGCCAGTTACGCCCATACCTGAAAGAGTACCCAAATCAGTATATTCTGGATGTTTGG
CTCGATCAGATCCAGATTTTTTACGGAACATCCCTGGCTGACAGAAAGGCGATTGATTTTTGGGTGTATGATTTTTACGA
CGAAAACTACACTTTTGCAGAACATAAACAGTATCTGGAATATATTACGCAAAAGAAAACAGAAATCGACAATATCGCTG
GCATCATTGATTTTTTAGATGAAGAAGTAAGACGTAACAAAAATATAGTAAAGGAAAGTAAAAATATTTATTTTGGTATT
GACTGTGTAATGTCTTACAGTAAGCCATTCAATACATCTTTTATACCTTATGATGTGATCTTTCCGTTAAAAAAGATGAA
ATATGAGCACACTGAATTTTATGCTCCAAACAAGGAAATGGAATACCTGTTCTTTGAATTTACAGACCCTATGAAGTTTT
CAAATGATTTGGGGATTAGCCATCATCATGTGTTGCGGGACAGGTTCATACAGGAATATGGCCTGTAA

Upstream 100 bases:

>100_bases
AGGCGGCAAAACGTATCGCCGACCACCTGAAAATGCAATAATATATTTTGTTAATACATTGCTGTGTGTATTGCGTTGTG
CATAAGAGCGGAGGTTTTAT

Downstream 100 bases:

>100_bases
ACGCTACATGACAGGTGTGTAAAATAGTTTCGTGAAGCCTGCTGATATTGCTGTTAGCAGAACGGCATTCGCAGGGCAGA
ACTATGTGTGCAAGGCAAAA

Product: LicD family protein

Products: NA

Alternate protein names: LPS Biosynthesis Protein; Lipooligosaccharide Cholinephosphotransferase; LicD Family Phosphotransferase

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MPASPTDMILKKLQRKMYEAEHYKRLWQGTRAQLDYLKEHADITRLKPATGKLRQEQLELVDVCNNFFEEIKELDIKPFL
IAGNLLGAVRHKGFIPWDDDLDFGLMREDYTKLVNFCKKKYVVTDYTKNYKKSEWNYVTGYSQLRPYLKEYPNQYILDVW
LDQIQIFYGTSLADRKAIDFWVYDFYDENYTFAEHKQYLEYITQKKTEIDNIAGIIDFLDEEVRRNKNIVKESKNIYFGI
DCVMSYSKPFNTSFIPYDVIFPLKKMKYEHTEFYAPNKEMEYLFFEFTDPMKFSNDLGISHHHVLRDRFIQEYGL

Sequences:

>Translated_315_residues
MPASPTDMILKKLQRKMYEAEHYKRLWQGTRAQLDYLKEHADITRLKPATGKLRQEQLELVDVCNNFFEEIKELDIKPFL
IAGNLLGAVRHKGFIPWDDDLDFGLMREDYTKLVNFCKKKYVVTDYTKNYKKSEWNYVTGYSQLRPYLKEYPNQYILDVW
LDQIQIFYGTSLADRKAIDFWVYDFYDENYTFAEHKQYLEYITQKKTEIDNIAGIIDFLDEEVRRNKNIVKESKNIYFGI
DCVMSYSKPFNTSFIPYDVIFPLKKMKYEHTEFYAPNKEMEYLFFEFTDPMKFSNDLGISHHHVLRDRFIQEYGL
>Mature_314_residues
PASPTDMILKKLQRKMYEAEHYKRLWQGTRAQLDYLKEHADITRLKPATGKLRQEQLELVDVCNNFFEEIKELDIKPFLI
AGNLLGAVRHKGFIPWDDDLDFGLMREDYTKLVNFCKKKYVVTDYTKNYKKSEWNYVTGYSQLRPYLKEYPNQYILDVWL
DQIQIFYGTSLADRKAIDFWVYDFYDENYTFAEHKQYLEYITQKKTEIDNIAGIIDFLDEEVRRNKNIVKESKNIYFGID
CVMSYSKPFNTSFIPYDVIFPLKKMKYEHTEFYAPNKEMEYLFFEFTDPMKFSNDLGISHHHVLRDRFIQEYGL

Specific function: Unknown

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37941; Mature: 37810

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASPTDMILKKLQRKMYEAEHYKRLWQGTRAQLDYLKEHADITRLKPATGKLRQEQLEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH
VDVCNNFFEEIKELDIKPFLIAGNLLGAVRHKGFIPWDDDLDFGLMREDYTKLVNFCKKK
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
YVVTDYTKNYKKSEWNYVTGYSQLRPYLKEYPNQYILDVWLDQIQIFYGTSLADRKAIDF
CEEECHHHCCCCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHEE
WVYDFYDENYTFAEHKQYLEYITQKKTEIDNIAGIIDFLDEEVRRNKNIVKESKNIYFGI
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH
DCVMSYSKPFNTSFIPYDVIFPLKKMKYEHTEFYAPNKEMEYLFFEFTDPMKFSNDLGIS
HHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHEECCCCCCEEEEEEECCCHHCCCCCCCC
HHHVLRDRFIQEYGL
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
PASPTDMILKKLQRKMYEAEHYKRLWQGTRAQLDYLKEHADITRLKPATGKLRQEQLEL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHH
VDVCNNFFEEIKELDIKPFLIAGNLLGAVRHKGFIPWDDDLDFGLMREDYTKLVNFCKKK
HHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
YVVTDYTKNYKKSEWNYVTGYSQLRPYLKEYPNQYILDVWLDQIQIFYGTSLADRKAIDF
CEEECHHHCCCCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHEE
WVYDFYDENYTFAEHKQYLEYITQKKTEIDNIAGIIDFLDEEVRRNKNIVKESKNIYFGI
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEH
DCVMSYSKPFNTSFIPYDVIFPLKKMKYEHTEFYAPNKEMEYLFFEFTDPMKFSNDLGIS
HHHHCCCCCCCCCCCCHHHHHHHHHHCCHHHHEECCCCCCEEEEEEECCCHHCCCCCCCC
HHHVLRDRFIQEYGL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA