| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904222
Identifier: 220904222
GI number: 220904222
Start: 1105373
End: 1106077
Strand: Reverse
Name: 220904222
Synonym: Ddes_0949
Alternate gene names: NA
Gene position: 1106077-1105373 (Counterclockwise)
Preceding gene: 220904230
Following gene: 220904221
Centisome position: 38.49
GC content: 59.43
Gene sequence:
>705_bases ATGCACGGTTTATTGCGTTTTATACTCATCTGCGCCCTTGCGCTGCCCCTGATGCCCGGCTGCTCCAAAGCGCCGCCTTC AGCCAATGATCCCGGCTATGTAGATGCCGTGGAGCTGAAGCTCAAATTTCGCGAACTGGCAGACCAGATGCTCGCTACAG TGCCCAATGACGCCCTGCAGGGCTTTGTGGCCATGCCCACGTCCTTTGTGGATGAAAACAGCACATCGCGCAGCTCTCCG CTGGGAAGGCTCATGGGCGAAGCCATGTTTTACGAATTCAACCAGCGGGGCTTTCCCGCACGCGAATACCGCCTGACGGG CAATATTGCCGTTGTCGGCGGACGCGACGACCTGGCCCTGATTGAAAATGCGGTCATCCCCGTCGGGCAGAAATGGGCGG CGCTGGTTGTGGGAACCTATTATGTGGACAAGGACGCCACCTTCGTCAACGCCCGTCTTGTGCGGGCCACCGACGGCCTT GTCATGCGCACGGGGCAGCTTGTACTGGTCAATACGCCCATTGTGGCGCGTATGGGCAAAACAGATCCCCCTGCGCCGAA ACCCGCGCCACCGGCACAGAGTGCAAGCGTGTCCACAGCTTCGGCCTCCAAGCCTTCCGGACAGCGCGGAAGCCTGTATC CCTCACTCTACACACCGGCCAGTTCTATCAGCAGCGGCAACGTAGCCATCAAACAGGGCAAATAA
Upstream 100 bases:
>100_bases TTTTTGCACCGGGACGGGCAGGCGCCCGATTTTTCACCCCCGCACTGAAGTTTACCGAACGGGGGCCGATAAGTATGACA GAACACTACCTGAGGTTGCC
Downstream 100 bases:
>100_bases TGCCGGAAAGCAGCCATGCGTTTTACTTGTAGCTTGCGTATTTTTGGAATTACACTTGCCGCCCTGGCGGCAGGGCCGTT TTTTGCGGTGCACCCGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MHGLLRFILICALALPLMPGCSKAPPSANDPGYVDAVELKLKFRELADQMLATVPNDALQGFVAMPTSFVDENSTSRSSP LGRLMGEAMFYEFNQRGFPAREYRLTGNIAVVGGRDDLALIENAVIPVGQKWAALVVGTYYVDKDATFVNARLVRATDGL VMRTGQLVLVNTPIVARMGKTDPPAPKPAPPAQSASVSTASASKPSGQRGSLYPSLYTPASSISSGNVAIKQGK
Sequences:
>Translated_234_residues MHGLLRFILICALALPLMPGCSKAPPSANDPGYVDAVELKLKFRELADQMLATVPNDALQGFVAMPTSFVDENSTSRSSP LGRLMGEAMFYEFNQRGFPAREYRLTGNIAVVGGRDDLALIENAVIPVGQKWAALVVGTYYVDKDATFVNARLVRATDGL VMRTGQLVLVNTPIVARMGKTDPPAPKPAPPAQSASVSTASASKPSGQRGSLYPSLYTPASSISSGNVAIKQGK >Mature_234_residues MHGLLRFILICALALPLMPGCSKAPPSANDPGYVDAVELKLKFRELADQMLATVPNDALQGFVAMPTSFVDENSTSRSSP LGRLMGEAMFYEFNQRGFPAREYRLTGNIAVVGGRDDLALIENAVIPVGQKWAALVVGTYYVDKDATFVNARLVRATDGL VMRTGQLVLVNTPIVARMGKTDPPAPKPAPPAQSASVSTASASKPSGQRGSLYPSLYTPASSISSGNVAIKQGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24826; Mature: 24826
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGLLRFILICALALPLMPGCSKAPPSANDPGYVDAVELKLKFRELADQMLATVPNDALQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHC GFVAMPTSFVDENSTSRSSPLGRLMGEAMFYEFNQRGFPAREYRLTGNIAVVGGRDDLAL CHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCEEEEECCCCHHH IENAVIPVGQKWAALVVGTYYVDKDATFVNARLVRATDGLVMRTGQLVLVNTPIVARMGK HHHCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCEEEECCCEEEEECCHHEECCC TDPPAPKPAPPAQSASVSTASASKPSGQRGSLYPSLYTPASSISSGNVAIKQGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCC >Mature Secondary Structure MHGLLRFILICALALPLMPGCSKAPPSANDPGYVDAVELKLKFRELADQMLATVPNDALQ CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCHHHC GFVAMPTSFVDENSTSRSSPLGRLMGEAMFYEFNQRGFPAREYRLTGNIAVVGGRDDLAL CHHHCCHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCEEEEECCCCHHH IENAVIPVGQKWAALVVGTYYVDKDATFVNARLVRATDGLVMRTGQLVLVNTPIVARMGK HHHCCCCCCCCEEEEEEEEEEECCCCEEEEEEEEEECCCEEEECCCEEEEECCHHEECCC TDPPAPKPAPPAQSASVSTASASKPSGQRGSLYPSLYTPASSISSGNVAIKQGK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA