Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904128

Identifier: 220904128

GI number: 220904128

Start: 1002509

End: 1003351

Strand: Reverse

Name: 220904128

Synonym: Ddes_0855

Alternate gene names: NA

Gene position: 1003351-1002509 (Counterclockwise)

Preceding gene: 220904129

Following gene: 220904121

Centisome position: 34.92

GC content: 58.6

Gene sequence:

>843_bases
ATGCATATTGACATCCACACCCACGCCTTTCATCCCAAGATTGCGCACAAGGCGGTGGAACATCTGAACGGGCACTACGC
CGTTGCCTGTGCGGGCAACGGCACCATAACCAACCTGCTGGAAAATGAGCGCAGGGCCGGTATCGACATGTGCGTGGTAT
TGTGCGCGGCCACTGCTCCCGCGCAAGTCATTCCGGCCAACAATTACGCCATCAGCCTGCAACGGGCGCATCCAGACAGT
GTGATTGCCTTCGGCACCATACACCCCGGCTACGCCCAGTGGGAGGCCGAGCTTGACCGCATGGAGGCCGCAGGCATACG
CGGCATCAAGCTACATCCGGACTTCCAGGGCTTCTGGCTCAGCGACCCGCGCCTTTTGCCTATCTTTGAGGCTGCGCAAG
GACGCTTTATTTTTGAAATGCACATTGGGGACAAAATTTCTCCAGAAAAAAACCCCTCCTGCCCTTACAAGCTGGCTGCC
ATTCTGGACGCCTTTCCACGCCTTCAGGTCATAGCCGCGCACTTTGGCGGCTACCGCATGTGGGCGCATGCGCTCAAGGC
TTTCGCCGGCAAGAAGCGCCCCAACCTGTGGTTTGACAGCTCAAGCACCACGCCGTTTGCCACACCCATGCTTGTAAAAA
CCTTGCTGGCCGCCTACCCCGCTGACAGGATACTTTTCGGCACGGACTGGCCGCTGTATGATCCCCTGGATGAAAAACAC
AGGCTTCAGGAAAAAGGCGGCCTGAGCGACAGCATGCTGGAACGGCTCATGAGCAACGCCGCAACCATACCGGGCCTGCT
GCCCCCGCAAACCGGACAGGCGGAACAAGCCATCAGGCATTGA

Upstream 100 bases:

>100_bases
GGGCAAGGCAGAACATCATTGATCTCACGGCGGAAAATATCCGTCGCTGGCAGGCCGGCACACCCGTCAACGTAGTCAAC
GGGGTGAGCAGCGTCTAATC

Downstream 100 bases:

>100_bases
CAGCCGCCCTCTTTCCAAGTAAAGCATTTGCCAAGCCGGACGGCGGCAGCACTGCCAACTCCGTCAGGTCCGAAAGGAAG
CAGCGGCAACAGAAGTTGCC

Product: amidohydrolase 2

Products: NA

Alternate protein names: Amidohydrolase; Metal-Dependent Hydrolase; Metal-Dependent Hydrolase Of TIM-Barrel Fold; TIM-Barrel Fold Metal-Dependent Hydrolase; Amidohydrolase 2 Family Protein; Amidohydrolase Family

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MHIDIHTHAFHPKIAHKAVEHLNGHYAVACAGNGTITNLLENERRAGIDMCVVLCAATAPAQVIPANNYAISLQRAHPDS
VIAFGTIHPGYAQWEAELDRMEAAGIRGIKLHPDFQGFWLSDPRLLPIFEAAQGRFIFEMHIGDKISPEKNPSCPYKLAA
ILDAFPRLQVIAAHFGGYRMWAHALKAFAGKKRPNLWFDSSSTTPFATPMLVKTLLAAYPADRILFGTDWPLYDPLDEKH
RLQEKGGLSDSMLERLMSNAATIPGLLPPQTGQAEQAIRH

Sequences:

>Translated_280_residues
MHIDIHTHAFHPKIAHKAVEHLNGHYAVACAGNGTITNLLENERRAGIDMCVVLCAATAPAQVIPANNYAISLQRAHPDS
VIAFGTIHPGYAQWEAELDRMEAAGIRGIKLHPDFQGFWLSDPRLLPIFEAAQGRFIFEMHIGDKISPEKNPSCPYKLAA
ILDAFPRLQVIAAHFGGYRMWAHALKAFAGKKRPNLWFDSSSTTPFATPMLVKTLLAAYPADRILFGTDWPLYDPLDEKH
RLQEKGGLSDSMLERLMSNAATIPGLLPPQTGQAEQAIRH
>Mature_280_residues
MHIDIHTHAFHPKIAHKAVEHLNGHYAVACAGNGTITNLLENERRAGIDMCVVLCAATAPAQVIPANNYAISLQRAHPDS
VIAFGTIHPGYAQWEAELDRMEAAGIRGIKLHPDFQGFWLSDPRLLPIFEAAQGRFIFEMHIGDKISPEKNPSCPYKLAA
ILDAFPRLQVIAAHFGGYRMWAHALKAFAGKKRPNLWFDSSSTTPFATPMLVKTLLAAYPADRILFGTDWPLYDPLDEKH
RLQEKGGLSDSMLERLMSNAATIPGLLPPQTGQAEQAIRH

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30954; Mature: 30954

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIDIHTHAFHPKIAHKAVEHLNGHYAVACAGNGTITNLLENERRAGIDMCVVLCAATAP
CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCC
AQVIPANNYAISLQRAHPDSVIAFGTIHPGYAQWEAELDRMEAAGIRGIKLHPDFQGFWL
CEEEECCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEC
SDPRLLPIFEAAQGRFIFEMHIGDKISPEKNPSCPYKLAAILDAFPRLQVIAAHFGGYRM
CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
WAHALKAFAGKKRPNLWFDSSSTTPFATPMLVKTLLAAYPADRILFGTDWPLYDPLDEKH
HHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHH
RLQEKGGLSDSMLERLMSNAATIPGLLPPQTGQAEQAIRH
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC
>Mature Secondary Structure
MHIDIHTHAFHPKIAHKAVEHLNGHYAVACAGNGTITNLLENERRAGIDMCVVLCAATAP
CEEEEECCCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHCCCC
AQVIPANNYAISLQRAHPDSVIAFGTIHPGYAQWEAELDRMEAAGIRGIKLHPDFQGFWL
CEEEECCCEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEC
SDPRLLPIFEAAQGRFIFEMHIGDKISPEKNPSCPYKLAAILDAFPRLQVIAAHFGGYRM
CCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHH
WAHALKAFAGKKRPNLWFDSSSTTPFATPMLVKTLLAAYPADRILFGTDWPLYDPLDEKH
HHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHH
RLQEKGGLSDSMLERLMSNAATIPGLLPPQTGQAEQAIRH
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA