| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is zraS [H]
Identifier: 220904125
GI number: 220904125
Start: 996825
End: 998411
Strand: Direct
Name: zraS [H]
Synonym: Ddes_0852
Alternate gene names: 220904125
Gene position: 996825-998411 (Clockwise)
Preceding gene: 220904124
Following gene: 220904126
Centisome position: 34.69
GC content: 58.98
Gene sequence:
>1587_bases ATGTGGACGTTCTTTAGAAAAAAACAGGCTCCGCCTCCTGATGCCATTGCTACGGCAAGCGGGCAGGACGGCGCGGCGCA GGCCGGAAGCGGCCGCGGCATGCCGTCGGGCAGCAGCCAGGATTGCGGCCAGACAGGCTCTACGGCCGGCTCCCGGGGTG ATGCCGGCGAGGGGTTGCCCCTGAGTTACGCCCGGCCCCTGTCCTGGCTTTCGCTGGTGATTATTCTGCTCACCAGTCTG GTGCTTTCGTTCTTCATTTCCAATTCAGCCCGCGAAACCCTGCTGACCCGGCAGGAGGGTTTCGCCCGCCTGCTGGTGGA AAACCTCAACAGCCAGATTTTCCGGCGCTTTGCCTTGCCCACGCTTTTCGGCTACGGGCGCATTTCCTTGCGGCAGCCCG CCCAGTACGACCGGCTGGATCAGGTGGTGCAGTCCGTGATTCACGGTCTGCCTGTGGAACGTCTGCGCATCTATGATTTT TCACGCATTGTGGCATATTCCACCCGCAAGGAAGAAATCGGCCGTGCCGGGCTTTCTCCGGCCAATCTGGACGAGGTGTT GCACGGCGCGGCCCCCAAGTCTGAAATAATTTCGACCATACCGGCATGGCAGGCCCCTTTCAGGCTCCCGCTTGAAGAAG GAACCTTTGTTCTCCGTGTGCTGTACCCCTTGCGGGGTGAATCGCTCAAGCCCGGTGAGGATGCCCCCATCATGGGCGCG CTGGAGCTTACACAGGACATTACGGGCGACTATGAGCAGGTGGTGACGTTTCAGGGCATTATTGTAATCATGTGCCTCAT GTCTTCGGTGGTGCTTTTCGGCCTTTTGATCATGCTTATCCACAGGTCGGAGCGTGTACTGGCCGAGCGGATGAATAAAA ACCGCCAGCTCGAGAAGCAGCTTCACAGCAACGAACGTTTTGTGAGCATGGGCCGCGTGATCGCCAGTATTGCCCACGAG ATCAGAAATCCTCTCGGCATCATCCGCTCCAGCGCCGAGCTGCTGCAACGCCGCAGCGATGCCGATGCAGGAACCCGGCG TATACTGGGAGCCATTTTTGACGAATCTGTGCGCCTTTCACAAACCGTAAACGACTTTCTTGACTATGCCCGCCCCCGGC AACCCAAGCAGGACCTGGTTGATATAAGCCTTGTGCTGGACCAGGTGCTGGGCTTTCTGGAGGGTGATATGGGCCGCCGC AACGTGGCGCTGGAACGCAATACTGAAGAGGGCCTTTTCGTTCATGGCGACAAGGATTTGCTGTACCGCGCTTTTTACAA TATTCTGGTGAACGGACAACAGGCAATGGACGGCCCGGGCGTACTGCACATCAGTGGAGTTCATGACGGCGAGGGGCATG TGCGGCTGGAGTTTCTCGACTCCGGTCCCGGTTTTGACGCCTCCGTTCTGGCCAACCTGCTGGACCCCTTCTTTACGACC AAAGACGGGGGAACTGGCCTTGGCCTGCCCATTGTGCAGTCCATTATCACAAGCCACGGCGGCGTGATCCAACTGGAAAA CGGCCCGGAAGGCGGCGCTCTTGTACGTGTGCTGCTGCCCGAAGCCCATGCCGGGGTACAGGAATAG
Upstream 100 bases:
>100_bases TCTTGCCAACGCCCGCCTGGGTGCGCCGGGCTATGAGCGTGAACAGACGGATCTGGACAGTTTTATGGCCGTACCGTTGC AGGAGCAGGTGTTTTAGGGC
Downstream 100 bases:
>100_bases TCTCATGAGTGAAAAAGCGCATATTCTGATTATTGACGACGAAAAAAACTACCTTCTTGTTCTGCAGACCCTGCTGGAAG ATGAAGGGTACACCGTTACC
Product: histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 528; Mature: 528
Protein sequence:
>528_residues MWTFFRKKQAPPPDAIATASGQDGAAQAGSGRGMPSGSSQDCGQTGSTAGSRGDAGEGLPLSYARPLSWLSLVIILLTSL VLSFFISNSARETLLTRQEGFARLLVENLNSQIFRRFALPTLFGYGRISLRQPAQYDRLDQVVQSVIHGLPVERLRIYDF SRIVAYSTRKEEIGRAGLSPANLDEVLHGAAPKSEIISTIPAWQAPFRLPLEEGTFVLRVLYPLRGESLKPGEDAPIMGA LELTQDITGDYEQVVTFQGIIVIMCLMSSVVLFGLLIMLIHRSERVLAERMNKNRQLEKQLHSNERFVSMGRVIASIAHE IRNPLGIIRSSAELLQRRSDADAGTRRILGAIFDESVRLSQTVNDFLDYARPRQPKQDLVDISLVLDQVLGFLEGDMGRR NVALERNTEEGLFVHGDKDLLYRAFYNILVNGQQAMDGPGVLHISGVHDGEGHVRLEFLDSGPGFDASVLANLLDPFFTT KDGGTGLGLPIVQSIITSHGGVIQLENGPEGGALVRVLLPEAHAGVQE
Sequences:
>Translated_528_residues MWTFFRKKQAPPPDAIATASGQDGAAQAGSGRGMPSGSSQDCGQTGSTAGSRGDAGEGLPLSYARPLSWLSLVIILLTSL VLSFFISNSARETLLTRQEGFARLLVENLNSQIFRRFALPTLFGYGRISLRQPAQYDRLDQVVQSVIHGLPVERLRIYDF SRIVAYSTRKEEIGRAGLSPANLDEVLHGAAPKSEIISTIPAWQAPFRLPLEEGTFVLRVLYPLRGESLKPGEDAPIMGA LELTQDITGDYEQVVTFQGIIVIMCLMSSVVLFGLLIMLIHRSERVLAERMNKNRQLEKQLHSNERFVSMGRVIASIAHE IRNPLGIIRSSAELLQRRSDADAGTRRILGAIFDESVRLSQTVNDFLDYARPRQPKQDLVDISLVLDQVLGFLEGDMGRR NVALERNTEEGLFVHGDKDLLYRAFYNILVNGQQAMDGPGVLHISGVHDGEGHVRLEFLDSGPGFDASVLANLLDPFFTT KDGGTGLGLPIVQSIITSHGGVIQLENGPEGGALVRVLLPEAHAGVQE >Mature_528_residues MWTFFRKKQAPPPDAIATASGQDGAAQAGSGRGMPSGSSQDCGQTGSTAGSRGDAGEGLPLSYARPLSWLSLVIILLTSL VLSFFISNSARETLLTRQEGFARLLVENLNSQIFRRFALPTLFGYGRISLRQPAQYDRLDQVVQSVIHGLPVERLRIYDF SRIVAYSTRKEEIGRAGLSPANLDEVLHGAAPKSEIISTIPAWQAPFRLPLEEGTFVLRVLYPLRGESLKPGEDAPIMGA LELTQDITGDYEQVVTFQGIIVIMCLMSSVVLFGLLIMLIHRSERVLAERMNKNRQLEKQLHSNERFVSMGRVIASIAHE IRNPLGIIRSSAELLQRRSDADAGTRRILGAIFDESVRLSQTVNDFLDYARPRQPKQDLVDISLVLDQVLGFLEGDMGRR NVALERNTEEGLFVHGDKDLLYRAFYNILVNGQQAMDGPGVLHISGVHDGEGHVRLEFLDSGPGFDASVLANLLDPFFTT KDGGTGLGLPIVQSIITSHGGVIQLENGPEGGALVRVLLPEAHAGVQE
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=262, Percent_Identity=29.3893129770992, Blast_Score=128, Evalue=7e-31, Organism=Escherichia coli, GI1788549, Length=237, Percent_Identity=29.1139240506329, Blast_Score=122, Evalue=7e-29, Organism=Escherichia coli, GI1788393, Length=251, Percent_Identity=29.4820717131474, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1786912, Length=246, Percent_Identity=28.8617886178862, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1790346, Length=228, Percent_Identity=29.3859649122807, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1790300, Length=243, Percent_Identity=27.5720164609054, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789808, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI87081816, Length=224, Percent_Identity=29.4642857142857, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57757; Mature: 57757
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWTFFRKKQAPPPDAIATASGQDGAAQAGSGRGMPSGSSQDCGQTGSTAGSRGDAGEGLP CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LSYARPLSWLSLVIILLTSLVLSFFISNSARETLLTRQEGFARLLVENLNSQIFRRFALP CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLFGYGRISLRQPAQYDRLDQVVQSVIHGLPVERLRIYDFSRIVAYSTRKEEIGRAGLSP HHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC ANLDEVLHGAAPKSEIISTIPAWQAPFRLPLEEGTFVLRVLYPLRGESLKPGEDAPIMGA CCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCHH LELTQDITGDYEQVVTFQGIIVIMCLMSSVVLFGLLIMLIHRSERVLAERMNKNRQLEKQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LHSNERFVSMGRVIASIAHEIRNPLGIIRSSAELLQRRSDADAGTRRILGAIFDESVRLS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHH QTVNDFLDYARPRQPKQDLVDISLVLDQVLGFLEGDMGRRNVALERNTEEGLFVHGDKDL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHH LYRAFYNILVNGQQAMDGPGVLHISGVHDGEGHVRLEFLDSGPGFDASVLANLLDPFFTT HHHHHHHHHHCCCHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC KDGGTGLGLPIVQSIITSHGGVIQLENGPEGGALVRVLLPEAHAGVQE CCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCHHCCCCCC >Mature Secondary Structure MWTFFRKKQAPPPDAIATASGQDGAAQAGSGRGMPSGSSQDCGQTGSTAGSRGDAGEGLP CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LSYARPLSWLSLVIILLTSLVLSFFISNSARETLLTRQEGFARLLVENLNSQIFRRFALP CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLFGYGRISLRQPAQYDRLDQVVQSVIHGLPVERLRIYDFSRIVAYSTRKEEIGRAGLSP HHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCC ANLDEVLHGAAPKSEIISTIPAWQAPFRLPLEEGTFVLRVLYPLRGESLKPGEDAPIMGA CCHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCHH LELTQDITGDYEQVVTFQGIIVIMCLMSSVVLFGLLIMLIHRSERVLAERMNKNRQLEKQ HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH LHSNERFVSMGRVIASIAHEIRNPLGIIRSSAELLQRRSDADAGTRRILGAIFDESVRLS HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHH QTVNDFLDYARPRQPKQDLVDISLVLDQVLGFLEGDMGRRNVALERNTEEGLFVHGDKDL HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEECCHHH LYRAFYNILVNGQQAMDGPGVLHISGVHDGEGHVRLEFLDSGPGFDASVLANLLDPFFTT HHHHHHHHHHCCCHHCCCCCEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCC KDGGTGLGLPIVQSIITSHGGVIQLENGPEGGALVRVLLPEAHAGVQE CCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11243806 [H]