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The map label for this gene is hyaC [H]

Identifier: 220904109

GI number: 220904109

Start: 980990

End: 981694

Strand: Reverse

Name: hyaC [H]

Synonym: Ddes_0835

Alternate gene names: 220904109

Gene position: 981694-980990 (Counterclockwise)

Preceding gene: 220904110

Following gene: 220904108

Centisome position: 34.16

GC content: 53.48

Gene sequence:

>705_bases
ATGAGCGATACAAGACAAAGCACGCCCGAAGTACCCATGGGCAAAAGCATCTATGTGTACCAGTTGCCCATACGCATCTG
GCACTGGGTCATGGTAGCCTGTGTAAGCGTGCTCATCATTACCGGTTACATCATAGGCAAACCCTGGCTGTCCGTAGCCG
GTACGTCAGCCTATGACACCTTTTATATGGGCTACACCCGCATGGCACATTTCATCGCGGGCTTTATTCTTATCATCTCC
ACAGTATTGCGCTACCTTTACGGCATTATCGGCAACCGCTACTCGCGTGAGCTGATCATTCTGCCCGTCTGGAGCAAAGC
CTGGTGGAACGACCTGTGGCACGACATCCGCTGGTATCTCTTTCTCGATAAAGAGCCACGCGCCCATGTGGGGCACAACC
CTCTGGCCCAGGCAGGCATGGCTGTGGGCATGGTTTTCATGCTCGTGATCATGCTTACCGGCCTCGGCATGTATGCCGAG
AGCAGCAGCTTGGCTTTCTTCAAGCCGTTCCGCTTTGTGCTGGACTTCGCCTACTGGATAGGCGGCAACGGCCAGGAACT
GCGCAGCCTGCACAGACTGGGCATGCTTCTTCTGGTCACCTTTGTAACCGTACATATATACATGGTTATTCGTGAAGAAA
TCATGGGCAAGACCACTCTGGTTTCCACCATGTTCAGCGGTTACAGAGAGCGGCGTAAAACCTAG

Upstream 100 bases:

>100_bases
CCGACGGCAAGGACCTGCTCACTGTGCGCATGGACCGAGGCATGTAGCTCCGGCCCCGCTGACGCCCGGCGCGTAAGCGC
CCCAAGCGTAGGAGAACGAT

Downstream 100 bases:

>100_bases
AGCATTTTAACCTTGAAAAAATGTAAATGCTCCAACTCTGCATAAAAATGCAGCGCGGCGCAACGCGACGTGGATTCTGC
CAAAAATCCCACTTTTCGGC

Product: Ni/Fe-hydrogenase, b-type cytochrome subunit

Products: oxidized ferredoxin; H2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSDTRQSTPEVPMGKSIYVYQLPIRIWHWVMVACVSVLIITGYIIGKPWLSVAGTSAYDTFYMGYTRMAHFIAGFILIIS
TVLRYLYGIIGNRYSRELIILPVWSKAWWNDLWHDIRWYLFLDKEPRAHVGHNPLAQAGMAVGMVFMLVIMLTGLGMYAE
SSSLAFFKPFRFVLDFAYWIGGNGQELRSLHRLGMLLLVTFVTVHIYMVIREEIMGKTTLVSTMFSGYRERRKT

Sequences:

>Translated_234_residues
MSDTRQSTPEVPMGKSIYVYQLPIRIWHWVMVACVSVLIITGYIIGKPWLSVAGTSAYDTFYMGYTRMAHFIAGFILIIS
TVLRYLYGIIGNRYSRELIILPVWSKAWWNDLWHDIRWYLFLDKEPRAHVGHNPLAQAGMAVGMVFMLVIMLTGLGMYAE
SSSLAFFKPFRFVLDFAYWIGGNGQELRSLHRLGMLLLVTFVTVHIYMVIREEIMGKTTLVSTMFSGYRERRKT
>Mature_233_residues
SDTRQSTPEVPMGKSIYVYQLPIRIWHWVMVACVSVLIITGYIIGKPWLSVAGTSAYDTFYMGYTRMAHFIAGFILIIST
VLRYLYGIIGNRYSRELIILPVWSKAWWNDLWHDIRWYLFLDKEPRAHVGHNPLAQAGMAVGMVFMLVIMLTGLGMYAES
SSLAFFKPFRFVLDFAYWIGGNGQELRSLHRLGMLLLVTFVTVHIYMVIREEIMGKTTLVSTMFSGYRERRKT

Specific function: Probable b-type cytochrome [H]

COG id: COG1969

COG function: function code C; Ni,Fe-hydrogenase I cytochrome b subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupC/hyaC/hydC family [H]

Homologues:

Organism=Escherichia coli, GI1787208, Length=217, Percent_Identity=50.2304147465438, Blast_Score=242, Evalue=2e-65,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR011577
- InterPro:   IPR016174
- InterPro:   IPR000516 [H]

Pfam domain/function: PF00033 Cytochrom_B_N; PF01292 Ni_hydr_CYTB [H]

EC number: NA

Molecular weight: Translated: 27059; Mature: 26928

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTRQSTPEVPMGKSIYVYQLPIRIWHWVMVACVSVLIITGYIIGKPWLSVAGTSAYDT
CCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
FYMGYTRMAHFIAGFILIISTVLRYLYGIIGNRYSRELIILPVWSKAWWNDLWHDIRWYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHEEEE
FLDKEPRAHVGHNPLAQAGMAVGMVFMLVIMLTGLGMYAESSSLAFFKPFRFVLDFAYWI
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
GGNGQELRSLHRLGMLLLVTFVTVHIYMVIREEIMGKTTLVSTMFSGYRERRKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDTRQSTPEVPMGKSIYVYQLPIRIWHWVMVACVSVLIITGYIIGKPWLSVAGTSAYDT
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHH
FYMGYTRMAHFIAGFILIISTVLRYLYGIIGNRYSRELIILPVWSKAWWNDLWHDIRWYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHEEEE
FLDKEPRAHVGHNPLAQAGMAVGMVFMLVIMLTGLGMYAESSSLAFFKPFRFVLDFAYWI
EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
GGNGQELRSLHRLGMLLLVTFVTVHIYMVIREEIMGKTTLVSTMFSGYRERRKT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Reduced ferredoxin; 2 H+ [C]

Specific reaction: Reduced ferredoxin + 2 H+ = 2 oxidized ferredoxin + H2 [C]

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]