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The map label for this gene is fdhD [H]

Identifier: 220904103

GI number: 220904103

Start: 973996

End: 974793

Strand: Reverse

Name: fdhD [H]

Synonym: Ddes_0829

Alternate gene names: 220904103

Gene position: 974793-973996 (Counterclockwise)

Preceding gene: 220904108

Following gene: 220904102

Centisome position: 33.92

GC content: 60.9

Gene sequence:

>798_bases
ATGTCCAAGCCCGATCATCCCCCGGTCTGTTTTCCCATTACCCTTACCCGCATCAACCGTCTGGGCAGATATGAAGTGGA
CGACCTGCTCCTGCGCGAAGAAGCCTATAATCTTACATGCAACGGAAAAACCGTAGCCTGCCTGCACTGCATGCCCGACA
AGCTTGAGGAACTGGCCGTGGGCAGGCTGTTTACCTTGGGGCTGCTGCAAGACGCCCGGCAGATACGTTCCCTGAGCATT
TTGCCCCCCGCGCCGTCCCGCACGCAGGCCGCCACAGACGCCAAAGGCACGGCGGTCAAGCTCCGTATGGCCGCTGCGCC
CGATCAGCCCCCTGCGGGCAGCATGGCCGTGACCCTTGATCCCCCTCCTCCCTCTGTCCCCGCGCCTGAAGACGCCATAT
GCCTTACTGCCGACAGGGTTCACGAATTGCAGGCGGAATTTGAGGAGCACTGCAATCTCTACCGGCTTACCGGGGCAGCC
CACAGTTGCGCACTGGCCGACCCCTCCGGAGTTCTGCTTTTTTATGAAGACATCGCCCGCCATAACGCCCTGGACAAACT
TATCGGGGCCATGCTGCTGCGTGGCATCGGGCCGCAGGGCAAACTCATGATTTTCAGCGGCAGACTGGCGCTGGACATGC
TGGAAAAGGCCGCAGCCTGTGGTGTGCGCCTGCTGGTGGCCCCCGGCGCGCCCTCGCTGGCGGCAGTGGAACTGGCAAGG
GCCGTCGACATCTCCATTCTGGGTTTTGTGCGTCAGGGCAATATCAATATATATACCTGTCCGCACAGGATTGTCTGA

Upstream 100 bases:

>100_bases
CTCTTGTTTTTCAGCCCGTTTTGGCCGAAACTGAAGATAAGCCGTCTGCCGCCACCCGCCGCAGGCGCAGCATCCTACCG
CAAGGAGAAATCCGCCCGCC

Downstream 100 bases:

>100_bases
CATGTCGCACTGCCCGCATTCGCCGGCGGCTTCAGCGCAGGGCATGCTGCCTCTGGAAAAAGCGCTGGCTGCCCTGCTGG
CCTGCGCCGCCCCGGTGGAG

Product: formate dehydrogenase family accessory protein FdhD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSKPDHPPVCFPITLTRINRLGRYEVDDLLLREEAYNLTCNGKTVACLHCMPDKLEELAVGRLFTLGLLQDARQIRSLSI
LPPAPSRTQAATDAKGTAVKLRMAAAPDQPPAGSMAVTLDPPPPSVPAPEDAICLTADRVHELQAEFEEHCNLYRLTGAA
HSCALADPSGVLLFYEDIARHNALDKLIGAMLLRGIGPQGKLMIFSGRLALDMLEKAAACGVRLLVAPGAPSLAAVELAR
AVDISILGFVRQGNINIYTCPHRIV

Sequences:

>Translated_265_residues
MSKPDHPPVCFPITLTRINRLGRYEVDDLLLREEAYNLTCNGKTVACLHCMPDKLEELAVGRLFTLGLLQDARQIRSLSI
LPPAPSRTQAATDAKGTAVKLRMAAAPDQPPAGSMAVTLDPPPPSVPAPEDAICLTADRVHELQAEFEEHCNLYRLTGAA
HSCALADPSGVLLFYEDIARHNALDKLIGAMLLRGIGPQGKLMIFSGRLALDMLEKAAACGVRLLVAPGAPSLAAVELAR
AVDISILGFVRQGNINIYTCPHRIV
>Mature_264_residues
SKPDHPPVCFPITLTRINRLGRYEVDDLLLREEAYNLTCNGKTVACLHCMPDKLEELAVGRLFTLGLLQDARQIRSLSIL
PPAPSRTQAATDAKGTAVKLRMAAAPDQPPAGSMAVTLDPPPPSVPAPEDAICLTADRVHELQAEFEEHCNLYRLTGAAH
SCALADPSGVLLFYEDIARHNALDKLIGAMLLRGIGPQGKLMIFSGRLALDMLEKAAACGVRLLVAPGAPSLAAVELARA
VDISILGFVRQGNINIYTCPHRIV

Specific function: Necessary for formate dehydrogenase activity [H]

COG id: COG1526

COG function: function code C; Uncharacterized protein required for formate dehydrogenase activity

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fdhD family [H]

Homologues:

Organism=Escherichia coli, GI1790329, Length=276, Percent_Identity=26.0869565217391, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003786 [H]

Pfam domain/function: PF02634 FdhD-NarQ [H]

EC number: NA

Molecular weight: Translated: 28485; Mature: 28353

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPDHPPVCFPITLTRINRLGRYEVDDLLLREEAYNLTCNGKTVACLHCMPDKLEELAV
CCCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHCEEEECCCEEEEEECCHHHHHHHHH
GRLFTLGLLQDARQIRSLSILPPAPSRTQAATDAKGTAVKLRMAAAPDQPPAGSMAVTLD
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEC
PPPPSVPAPEDAICLTADRVHELQAEFEEHCNLYRLTGAAHSCALADPSGVLLFYEDIAR
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCEEEEEHHHHH
HNALDKLIGAMLLRGIGPQGKLMIFSGRLALDMLEKAAACGVRLLVAPGAPSLAAVELAR
HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
AVDISILGFVRQGNINIYTCPHRIV
HHCEEEEEEEEECCEEEEECCCCCC
>Mature Secondary Structure 
SKPDHPPVCFPITLTRINRLGRYEVDDLLLREEAYNLTCNGKTVACLHCMPDKLEELAV
CCCCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHHCEEEECCCEEEEEECCHHHHHHHHH
GRLFTLGLLQDARQIRSLSILPPAPSRTQAATDAKGTAVKLRMAAAPDQPPAGSMAVTLD
HHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEC
PPPPSVPAPEDAICLTADRVHELQAEFEEHCNLYRLTGAAHSCALADPSGVLLFYEDIAR
CCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCEEEECCCCCEEEECCCCCEEEEEHHHHH
HNALDKLIGAMLLRGIGPQGKLMIFSGRLALDMLEKAAACGVRLLVAPGAPSLAAVELAR
HHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH
AVDISILGFVRQGNINIYTCPHRIV
HHCEEEEEEEEECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA