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The map label for this gene is opuAC [H]

Identifier: 220904096

GI number: 220904096

Start: 963171

End: 964034

Strand: Reverse

Name: opuAC [H]

Synonym: Ddes_0822

Alternate gene names: 220904096

Gene position: 964034-963171 (Counterclockwise)

Preceding gene: 220904097

Following gene: 220904094

Centisome position: 33.55

GC content: 55.67

Gene sequence:

>864_bases
ATGAAACTTCGCATACTGACTCTCGCCGTGGCCTTTGCCCTGCTGCTCTCTGCAGGAGTCATGGCCAAAGATAAAAAAGA
AGATAAAAATCTTCAGCTTGTCTACGTTGAATGGGACTGCGCCAATGCTTCGAGCCATCTGGCCAAGGCCGTGCTTGAAG
ACAAGCTGGGCTATAAAGTGGAATTGCTGCCCGTGACCCAGCCCATCCTCTGGACAAGCCTTGCCACCGGCGATGCCGAT
GCCATGGTGACCGCATGGCTGCCCGACACCCACAAGGACATGCACAACAAGGTCAAAAACAATGTGGAAGTGCTCGGCAA
GCTTACGGGGGGCGCACGCCTTGGCCTCGCCGTACCGGACTATGTGACGCTGAAATCCGTTGAAGAACTCAAAGCCAATG
CCGGCAAGTTCAAAAGCCGTATCGTGGGTATCGACCCCGGCGCGGGCGTCATGCAGCTGACGGAAAAACTGATGAAAGAC
TACGGTATTGACAATATGGAACTGATGGAAGGCAGCGATACCATCATGACCTCAAGCCTGTCCGACGCCATACGCAACAA
GGAATGGATCGTCGTCACGGCGTGGTCGCCTCACTGGATGTTCGGCCGCTGGGACATGCATTACCTTGAAGACCCCAAGG
GCAGCCTCGGCAGCGAAGAAGGCATCTATAATGTGGCGCGCAAGGGCCTCAAGGACGACCACCCCGCCGCCCATGCCTTT
CTGTCAAAATTCGCCTACGCCAACCCTGAGCAGTTACAGCAGCTCATGGCCTGGAATCAGGAAAAAGGCGCGGACCCCAT
GAAAAACGCCCGCCGTTTCATGAAGGAGCACCCTGAACTGGTGGAAGCCTGGCTGGCAAAGTAA

Upstream 100 bases:

>100_bases
TGCGCGGCCGCAGAGCGGGCAGCCATGCCCGTAACCGCGCCAGCCGCACAGCCGCCGTTGCTGCGACCGGCAAAAGGAAA
ACCTTGTAAAAGGAGAACCA

Downstream 100 bases:

>100_bases
CTGACGCAGATTACAGATTGCCGCAACCAGCAGTCGTTTTGCAAAAAGTCCCCCGGCATCGGATTGATGCCGGGGGACTT
GTACGGTCAGGGCAGCCGGA

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKLRILTLAVAFALLLSAGVMAKDKKEDKNLQLVYVEWDCANASSHLAKAVLEDKLGYKVELLPVTQPILWTSLATGDAD
AMVTAWLPDTHKDMHNKVKNNVEVLGKLTGGARLGLAVPDYVTLKSVEELKANAGKFKSRIVGIDPGAGVMQLTEKLMKD
YGIDNMELMEGSDTIMTSSLSDAIRNKEWIVVTAWSPHWMFGRWDMHYLEDPKGSLGSEEGIYNVARKGLKDDHPAAHAF
LSKFAYANPEQLQQLMAWNQEKGADPMKNARRFMKEHPELVEAWLAK

Sequences:

>Translated_287_residues
MKLRILTLAVAFALLLSAGVMAKDKKEDKNLQLVYVEWDCANASSHLAKAVLEDKLGYKVELLPVTQPILWTSLATGDAD
AMVTAWLPDTHKDMHNKVKNNVEVLGKLTGGARLGLAVPDYVTLKSVEELKANAGKFKSRIVGIDPGAGVMQLTEKLMKD
YGIDNMELMEGSDTIMTSSLSDAIRNKEWIVVTAWSPHWMFGRWDMHYLEDPKGSLGSEEGIYNVARKGLKDDHPAAHAF
LSKFAYANPEQLQQLMAWNQEKGADPMKNARRFMKEHPELVEAWLAK
>Mature_287_residues
MKLRILTLAVAFALLLSAGVMAKDKKEDKNLQLVYVEWDCANASSHLAKAVLEDKLGYKVELLPVTQPILWTSLATGDAD
AMVTAWLPDTHKDMHNKVKNNVEVLGKLTGGARLGLAVPDYVTLKSVEELKANAGKFKSRIVGIDPGAGVMQLTEKLMKD
YGIDNMELMEGSDTIMTSSLSDAIRNKEWIVVTAWSPHWMFGRWDMHYLEDPKGSLGSEEGIYNVARKGLKDDHPAAHAF
LSKFAYANPEQLQQLMAWNQEKGADPMKNARRFMKEHPELVEAWLAK

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32009; Mature: 32009

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRILTLAVAFALLLSAGVMAKDKKEDKNLQLVYVEWDCANASSHLAKAVLEDKLGYKV
CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEE
ELLPVTQPILWTSLATGDADAMVTAWLPDTHKDMHNKVKNNVEVLGKLTGGARLGLAVPD
EEEECCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCEECCCCCC
YVTLKSVEELKANAGKFKSRIVGIDPGAGVMQLTEKLMKDYGIDNMELMEGSDTIMTSSL
HHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
SDAIRNKEWIVVTAWSPHWMFGRWDMHYLEDPKGSLGSEEGIYNVARKGLKDDHPAAHAF
HHHHCCCCEEEEEECCCCEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
LSKFAYANPEQLQQLMAWNQEKGADPMKNARRFMKEHPELVEAWLAK
HHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MKLRILTLAVAFALLLSAGVMAKDKKEDKNLQLVYVEWDCANASSHLAKAVLEDKLGYKV
CCEEHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCEE
ELLPVTQPILWTSLATGDADAMVTAWLPDTHKDMHNKVKNNVEVLGKLTGGARLGLAVPD
EEEECCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHCCCCEECCCCCC
YVTLKSVEELKANAGKFKSRIVGIDPGAGVMQLTEKLMKDYGIDNMELMEGSDTIMTSSL
HHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
SDAIRNKEWIVVTAWSPHWMFGRWDMHYLEDPKGSLGSEEGIYNVARKGLKDDHPAAHAF
HHHHCCCCEEEEEECCCCEEECCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHH
LSKFAYANPEQLQQLMAWNQEKGADPMKNARRFMKEHPELVEAWLAK
HHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]