| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904094
Identifier: 220904094
GI number: 220904094
Start: 959406
End: 960422
Strand: Reverse
Name: 220904094
Synonym: Ddes_0820
Alternate gene names: NA
Gene position: 960422-959406 (Counterclockwise)
Preceding gene: 220904096
Following gene: 220904093
Centisome position: 33.42
GC content: 57.82
Gene sequence:
>1017_bases ATGCCCACTCCCACTCCTCGCCGCGACCTCGTGGTCCGGGGCATACTTTACATGCTGGCCATGGCTATTCCCACCAGTGT CAGCCTGATCTGCAACGAGCCGGAAGTGCTTGTGCTGGGTGCTCTGGGGGCCTTGTTCGCCCTCTTTATCGCTCCCCGCT ACAAACCGTTGCCGCGCACGCTCTGCATCGGCGCCGGGGGGCTGCTCGTTTGCATGGCCGGCGCGGTGGGTGTGTTTACC CAGGGCAACAACAATCTTGCCCTTATACCGCTGGTCATGTTCAGTTGGCTGGCCGCCCTGCCCCGGCCTGATCAGGCCTA CCTCAGCCTTGTTTTTAAAAATATGGGAACAGCAGCCCTGCTGACCCATTTCGGCATGACCAGTTCCATCAGTGCAGCCG CCATCTACATGACCGGTCTTGCCCTGGGGGCAACCCTGAGCGTGCTGGGCATACGGTTCGGCAGCGGACAGGGCAGCGGC GCAAGCCCTTTTGAAGAATTCAAGGCGTTCAAGCACGGGGCTGTCAACAATCCGCTGTTCGGCATGGCCGTTCCCGCTAC GGTACTTTTGTGTACCCTGGCCGCAGGCGGCCTGCACTTCAGCCATCCGGCCTGGGTGGGGCTGACTGTTCTCTTTGTCA TGCACAGTGACGGCGCCACCGAACTACGCCGCATACGCGACCGCGCCCTGGGAACAGTGGTCGGTGTCATTGCTGCCGCC CCCCTTGTATTCTACATATCATCCCCCCTTCCACTTGCTGCCTGCGTGTTCTGCGCCGCCCTTTTCATCCCTTACGCACA ACGCGGGCACTATATGCTCTTCAGTTTTATCATTACTCTTATCGTGCTGCTGCTGATCGATATGGCCACATTGCGCATGG GGGGTGATATTTCACTGCTGCGGTGGCGGCTGCTTGATACCATCCTGGCCTGTGGAGGAGTGCTTATTTCCAACCTCATA TTAAGACTTATAGCTTCCCGGCTTAACAGAAATAAAAAACTTGAAAACACCGTATAA
Upstream 100 bases:
>100_bases AAAAAAGACGGTTGACCTGATGCAAAGAGCACTGTACCTAATTTACAGTCATTCCTTTTAACAATAAAAACCACTGCCCG CCCATAAACACGGAGCCTGC
Downstream 100 bases:
>100_bases ATATAGCGCATCCACTTCTTGGCATTATTTAATATCCATTTAATATTGTTGAAAAACAATATATAAACTAAAAATTTATA AAATTATTGCACTCAACACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MPTPTPRRDLVVRGILYMLAMAIPTSVSLICNEPEVLVLGALGALFALFIAPRYKPLPRTLCIGAGGLLVCMAGAVGVFT QGNNNLALIPLVMFSWLAALPRPDQAYLSLVFKNMGTAALLTHFGMTSSISAAAIYMTGLALGATLSVLGIRFGSGQGSG ASPFEEFKAFKHGAVNNPLFGMAVPATVLLCTLAAGGLHFSHPAWVGLTVLFVMHSDGATELRRIRDRALGTVVGVIAAA PLVFYISSPLPLAACVFCAALFIPYAQRGHYMLFSFIITLIVLLLIDMATLRMGGDISLLRWRLLDTILACGGVLISNLI LRLIASRLNRNKKLENTV
Sequences:
>Translated_338_residues MPTPTPRRDLVVRGILYMLAMAIPTSVSLICNEPEVLVLGALGALFALFIAPRYKPLPRTLCIGAGGLLVCMAGAVGVFT QGNNNLALIPLVMFSWLAALPRPDQAYLSLVFKNMGTAALLTHFGMTSSISAAAIYMTGLALGATLSVLGIRFGSGQGSG ASPFEEFKAFKHGAVNNPLFGMAVPATVLLCTLAAGGLHFSHPAWVGLTVLFVMHSDGATELRRIRDRALGTVVGVIAAA PLVFYISSPLPLAACVFCAALFIPYAQRGHYMLFSFIITLIVLLLIDMATLRMGGDISLLRWRLLDTILACGGVLISNLI LRLIASRLNRNKKLENTV >Mature_337_residues PTPTPRRDLVVRGILYMLAMAIPTSVSLICNEPEVLVLGALGALFALFIAPRYKPLPRTLCIGAGGLLVCMAGAVGVFTQ GNNNLALIPLVMFSWLAALPRPDQAYLSLVFKNMGTAALLTHFGMTSSISAAAIYMTGLALGATLSVLGIRFGSGQGSGA SPFEEFKAFKHGAVNNPLFGMAVPATVLLCTLAAGGLHFSHPAWVGLTVLFVMHSDGATELRRIRDRALGTVVGVIAAAP LVFYISSPLPLAACVFCAALFIPYAQRGHYMLFSFIITLIVLLLIDMATLRMGGDISLLRWRLLDTILACGGVLISNLIL RLIASRLNRNKKLENTV
Specific function: Unknown
COG id: COG1289
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35956; Mature: 35824
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPTPRRDLVVRGILYMLAMAIPTSVSLICNEPEVLVLGALGALFALFIAPRYKPLPRT CCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCHH LCIGAGGLLVCMAGAVGVFTQGNNNLALIPLVMFSWLAALPRPDQAYLSLVFKNMGTAAL HHCCCCHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH LTHFGMTSSISAAAIYMTGLALGATLSVLGIRFGSGQGSGASPFEEFKAFKHGAVNNPLF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCCCCCCH GMAVPATVLLCTLAAGGLHFSHPAWVGLTVLFVMHSDGATELRRIRDRALGTVVGVIAAA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH PLVFYISSPLPLAACVFCAALFIPYAQRGHYMLFSFIITLIVLLLIDMATLRMGGDISLL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RWRLLDTILACGGVLISNLILRLIASRLNRNKKLENTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PTPTPRRDLVVRGILYMLAMAIPTSVSLICNEPEVLVLGALGALFALFIAPRYKPLPRT CCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHHHHCCCCCCCCHH LCIGAGGLLVCMAGAVGVFTQGNNNLALIPLVMFSWLAALPRPDQAYLSLVFKNMGTAAL HHCCCCHHHHHHHHHHHEEEECCCCEEEHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH LTHFGMTSSISAAAIYMTGLALGATLSVLGIRFGSGQGSGASPFEEFKAFKHGAVNNPLF HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHCCCCCCCCH GMAVPATVLLCTLAAGGLHFSHPAWVGLTVLFVMHSDGATELRRIRDRALGTVVGVIAAA HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH PLVFYISSPLPLAACVFCAALFIPYAQRGHYMLFSFIITLIVLLLIDMATLRMGGDISLL HHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH RWRLLDTILACGGVLISNLILRLIASRLNRNKKLENTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA