Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220904079

Identifier: 220904079

GI number: 220904079

Start: 942443

End: 943978

Strand: Reverse

Name: 220904079

Synonym: Ddes_0805

Alternate gene names: NA

Gene position: 943978-942443 (Counterclockwise)

Preceding gene: 220904080

Following gene: 220904078

Centisome position: 32.85

GC content: 60.35

Gene sequence:

>1536_bases
ATGAAAAAGCTGCTCACCATTCTGATCGTCCTGGCCGTTCTGGTCGCGGGCGGTCTGGCCGCGCTGGGCTTTGGACTGCG
TTCTGTTATTCAGGAGCAGACCCTCAATGCTCTCGGCAACATGACCATGAGCCCCCAGGGCAAGGCCTATACGGCCACGG
CGGAACAGGTGAATTTTTCGCCCCTGTCACGCGAGATGTCCATCCGGGGGCTGAGCCTGCAGGGCGAGCGTCCCCAGGGA
CCGGAAACATGGCAGGTTGCCGAAATTTCCTTCCGTCTTCCCGTACGCATGCTTCTGGTTTTCACACCGCTGCGCAACAT
GGTTCTTGACGGCAAAGACATGGTGGACGTGGCCGAAAACGTGGTGCTGCGCAACCTTGCCATGACGGCTCCCGACAACA
GGGTGGCTGTGCAGCGCGAAGAAATAGACGTCATCCGGGCCATGCCGTTTCTGGTGCGGCAGACGCTGGAAAGGCACGAG
CCTGTCGACATGGTGGCCGCTACTTACAGCATGGGGGCAGACAATACCCACGCCCATTTTATCACCGTGGACATTCCCGG
TCCCAGCGGTTCCACACGGCTGAGCCTGAAAGAAACGAGCATGCGCGGCTGGCAGGGACGTACCATTGACAGCATCGCCC
TGGACGGCCTGGAAGTGCGCGTGGACGGCACACCCGGCATAAGCATCGGCCATATCCGGCAGGAAGGACTCACCCTGCCC
GATGAAGACCTGCTGCGCCGGATTGTGGATGCCAGCGGGCAGGCCGATCCGGACGAAGCCCTGAACCAACTCATGCCGCT
TATGGAAACCGTGCTCGGCGCGGAGCCTCCCCTGCTGCGCAAGGCCTATGCCGCCGACATGACCTTTGCTGTGGAAACAA
GCTCGGTACAGGTCAAGGAAGCGGTTTTCGAGTGGCTTTCCAACGCGCCCGTCCATACCAGAAGCAGTGTCAAAGGGCTT
ACGGCCCCCTCAAGCCTGCTCCGGGCCCTGCTGGACCTGACGCTGCCCCCGCTGAATATGGATATGGCCTTTGAATCACG
CTCCAGCGGAGCCGCAAGCCATAAAACAGCCTTGGTCAGCGCTGCCGGGCTGGGAGTTCTTGACTGCGAGGTAAAACTCA
ACGAAAAACCCGGCACAAACGCGTTGGAAGACCTGCTTACACAGAGCTTCAGCGATTTCAGCCTGAAGTATAAAGACGAA
GGCCTTACTGCCTGGCTCGGACTCAACATCTCCACCAACGTGCCTCAGGCCGTGGGCGCGCTTGAAGCCCTCGCCGCGCT
GCCGGGCGTCAGGGCCGGACAACAGAATGACGCCATACGCCGCAGCCTGCAAACGTTTGCAGCCCGGCCGGGCAGCCTTG
AAATACAGACCACGCCCGGGCGCACGGCCCTTGTGCTTGATCTTATTGCCCTGCTGGACAATCCCGGCATGCTGCTTACC
GTTACTGCCAAACCGGGTGAACACGCCCTGAGGGAGCAGATGGAAGCTCTGCGCCTGACATTTGAAGCCATACAAGCTGT
AAGCTCCGGGCAATAG

Upstream 100 bases:

>100_bases
GTGGATTGACGCGGCGGTCCGCACAGGCAAGCCCGCTGGCGAAAAAACGAGGCCACCCGGCACGTGCGCCATGCCAAACA
CATAAAGGAAATACCTGCTT

Downstream 100 bases:

>100_bases
AAGAATCCGCAGGGGCAGAAGCCGCGCTTCTGCCCCTGCCATTGGCATGCCGGACACGCAGGGCAATACACGGGCGGCAC
AGTCCCCACCCGGCAACCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFSPLSREMSIRGLSLQGERPQG
PETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAENVVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHE
PVDMVAATYSMGADNTHAHFITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP
DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKEAVFEWLSNAPVHTRSSVKGL
TAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVSAAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDE
GLTAWLGLNISTNVPQAVGALEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT
VTAKPGEHALREQMEALRLTFEAIQAVSSGQ

Sequences:

>Translated_511_residues
MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFSPLSREMSIRGLSLQGERPQG
PETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAENVVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHE
PVDMVAATYSMGADNTHAHFITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP
DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKEAVFEWLSNAPVHTRSSVKGL
TAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVSAAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDE
GLTAWLGLNISTNVPQAVGALEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT
VTAKPGEHALREQMEALRLTFEAIQAVSSGQ
>Mature_511_residues
MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFSPLSREMSIRGLSLQGERPQG
PETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAENVVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHE
PVDMVAATYSMGADNTHAHFITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP
DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKEAVFEWLSNAPVHTRSSVKGL
TAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVSAAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDE
GLTAWLGLNISTNVPQAVGALEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT
VTAKPGEHALREQMEALRLTFEAIQAVSSGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55022; Mature: 55022

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFS
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCC
PLSREMSIRGLSLQGERPQGPETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAEN
CCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHH
VVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHEPVDMVAATYSMGADNTHAHF
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEE
ITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP
EEEEECCCCCCCEEEEECCCCCCCCCCCCHHEEECCEEEEECCCCCCEECCCHHCCCCCC
DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCHHHHH
AVFEWLSNAPVHTRSSVKGLTAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVS
HHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHH
AAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDEGLTAWLGLNISTNVPQAVGA
HCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHH
LEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE
VTAKPGEHALREQMEALRLTFEAIQAVSSGQ
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFS
CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCC
PLSREMSIRGLSLQGERPQGPETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAEN
CCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHH
VVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHEPVDMVAATYSMGADNTHAHF
HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEE
ITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP
EEEEECCCCCCCEEEEECCCCCCCCCCCCHHEEECCEEEEECCCCCCEECCCHHCCCCCC
DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKE
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCHHHHH
AVFEWLSNAPVHTRSSVKGLTAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVS
HHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHH
AAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDEGLTAWLGLNISTNVPQAVGA
HCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHH
LEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT
HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE
VTAKPGEHALREQMEALRLTFEAIQAVSSGQ
EECCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA