| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904079
Identifier: 220904079
GI number: 220904079
Start: 942443
End: 943978
Strand: Reverse
Name: 220904079
Synonym: Ddes_0805
Alternate gene names: NA
Gene position: 943978-942443 (Counterclockwise)
Preceding gene: 220904080
Following gene: 220904078
Centisome position: 32.85
GC content: 60.35
Gene sequence:
>1536_bases ATGAAAAAGCTGCTCACCATTCTGATCGTCCTGGCCGTTCTGGTCGCGGGCGGTCTGGCCGCGCTGGGCTTTGGACTGCG TTCTGTTATTCAGGAGCAGACCCTCAATGCTCTCGGCAACATGACCATGAGCCCCCAGGGCAAGGCCTATACGGCCACGG CGGAACAGGTGAATTTTTCGCCCCTGTCACGCGAGATGTCCATCCGGGGGCTGAGCCTGCAGGGCGAGCGTCCCCAGGGA CCGGAAACATGGCAGGTTGCCGAAATTTCCTTCCGTCTTCCCGTACGCATGCTTCTGGTTTTCACACCGCTGCGCAACAT GGTTCTTGACGGCAAAGACATGGTGGACGTGGCCGAAAACGTGGTGCTGCGCAACCTTGCCATGACGGCTCCCGACAACA GGGTGGCTGTGCAGCGCGAAGAAATAGACGTCATCCGGGCCATGCCGTTTCTGGTGCGGCAGACGCTGGAAAGGCACGAG CCTGTCGACATGGTGGCCGCTACTTACAGCATGGGGGCAGACAATACCCACGCCCATTTTATCACCGTGGACATTCCCGG TCCCAGCGGTTCCACACGGCTGAGCCTGAAAGAAACGAGCATGCGCGGCTGGCAGGGACGTACCATTGACAGCATCGCCC TGGACGGCCTGGAAGTGCGCGTGGACGGCACACCCGGCATAAGCATCGGCCATATCCGGCAGGAAGGACTCACCCTGCCC GATGAAGACCTGCTGCGCCGGATTGTGGATGCCAGCGGGCAGGCCGATCCGGACGAAGCCCTGAACCAACTCATGCCGCT TATGGAAACCGTGCTCGGCGCGGAGCCTCCCCTGCTGCGCAAGGCCTATGCCGCCGACATGACCTTTGCTGTGGAAACAA GCTCGGTACAGGTCAAGGAAGCGGTTTTCGAGTGGCTTTCCAACGCGCCCGTCCATACCAGAAGCAGTGTCAAAGGGCTT ACGGCCCCCTCAAGCCTGCTCCGGGCCCTGCTGGACCTGACGCTGCCCCCGCTGAATATGGATATGGCCTTTGAATCACG CTCCAGCGGAGCCGCAAGCCATAAAACAGCCTTGGTCAGCGCTGCCGGGCTGGGAGTTCTTGACTGCGAGGTAAAACTCA ACGAAAAACCCGGCACAAACGCGTTGGAAGACCTGCTTACACAGAGCTTCAGCGATTTCAGCCTGAAGTATAAAGACGAA GGCCTTACTGCCTGGCTCGGACTCAACATCTCCACCAACGTGCCTCAGGCCGTGGGCGCGCTTGAAGCCCTCGCCGCGCT GCCGGGCGTCAGGGCCGGACAACAGAATGACGCCATACGCCGCAGCCTGCAAACGTTTGCAGCCCGGCCGGGCAGCCTTG AAATACAGACCACGCCCGGGCGCACGGCCCTTGTGCTTGATCTTATTGCCCTGCTGGACAATCCCGGCATGCTGCTTACC GTTACTGCCAAACCGGGTGAACACGCCCTGAGGGAGCAGATGGAAGCTCTGCGCCTGACATTTGAAGCCATACAAGCTGT AAGCTCCGGGCAATAG
Upstream 100 bases:
>100_bases GTGGATTGACGCGGCGGTCCGCACAGGCAAGCCCGCTGGCGAAAAAACGAGGCCACCCGGCACGTGCGCCATGCCAAACA CATAAAGGAAATACCTGCTT
Downstream 100 bases:
>100_bases AAGAATCCGCAGGGGCAGAAGCCGCGCTTCTGCCCCTGCCATTGGCATGCCGGACACGCAGGGCAATACACGGGCGGCAC AGTCCCCACCCGGCAACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFSPLSREMSIRGLSLQGERPQG PETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAENVVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHE PVDMVAATYSMGADNTHAHFITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKEAVFEWLSNAPVHTRSSVKGL TAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVSAAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDE GLTAWLGLNISTNVPQAVGALEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT VTAKPGEHALREQMEALRLTFEAIQAVSSGQ
Sequences:
>Translated_511_residues MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFSPLSREMSIRGLSLQGERPQG PETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAENVVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHE PVDMVAATYSMGADNTHAHFITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKEAVFEWLSNAPVHTRSSVKGL TAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVSAAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDE GLTAWLGLNISTNVPQAVGALEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT VTAKPGEHALREQMEALRLTFEAIQAVSSGQ >Mature_511_residues MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFSPLSREMSIRGLSLQGERPQG PETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAENVVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHE PVDMVAATYSMGADNTHAHFITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKEAVFEWLSNAPVHTRSSVKGL TAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVSAAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDE GLTAWLGLNISTNVPQAVGALEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT VTAKPGEHALREQMEALRLTFEAIQAVSSGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55022; Mature: 55022
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFS CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCC PLSREMSIRGLSLQGERPQGPETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAEN CCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHH VVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHEPVDMVAATYSMGADNTHAHF HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEE ITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP EEEEECCCCCCCEEEEECCCCCCCCCCCCHHEEECCEEEEECCCCCCEECCCHHCCCCCC DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCHHHHH AVFEWLSNAPVHTRSSVKGLTAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVS HHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHH AAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDEGLTAWLGLNISTNVPQAVGA HCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHH LEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE VTAKPGEHALREQMEALRLTFEAIQAVSSGQ EECCCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKLLTILIVLAVLVAGGLAALGFGLRSVIQEQTLNALGNMTMSPQGKAYTATAEQVNFS CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCC PLSREMSIRGLSLQGERPQGPETWQVAEISFRLPVRMLLVFTPLRNMVLDGKDMVDVAEN CCCCCCEEEEEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHH VVLRNLAMTAPDNRVAVQREEIDVIRAMPFLVRQTLERHEPVDMVAATYSMGADNTHAHF HHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEE ITVDIPGPSGSTRLSLKETSMRGWQGRTIDSIALDGLEVRVDGTPGISIGHIRQEGLTLP EEEEECCCCCCCEEEEECCCCCCCCCCCCHHEEECCEEEEECCCCCCEECCCHHCCCCCC DEDLLRRIVDASGQADPDEALNQLMPLMETVLGAEPPLLRKAYAADMTFAVETSSVQVKE HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCHHHHH AVFEWLSNAPVHTRSSVKGLTAPSSLLRALLDLTLPPLNMDMAFESRSSGAASHKTALVS HHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHH AAGLGVLDCEVKLNEKPGTNALEDLLTQSFSDFSLKYKDEGLTAWLGLNISTNVPQAVGA HCCCCEEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEECCCEEEEEECCCCCCCHHHHHH LEALAALPGVRAGQQNDAIRRSLQTFAARPGSLEIQTTPGRTALVLDLIALLDNPGMLLT HHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEE VTAKPGEHALREQMEALRLTFEAIQAVSSGQ EECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA