| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is zraS [H]
Identifier: 220904042
GI number: 220904042
Start: 899903
End: 901924
Strand: Direct
Name: zraS [H]
Synonym: Ddes_0768
Alternate gene names: 220904042
Gene position: 899903-901924 (Clockwise)
Preceding gene: 220904038
Following gene: 220904043
Centisome position: 31.32
GC content: 62.36
Gene sequence:
>2022_bases ATGAAAAGCAGAGTCTCAAGACTGTTTTCCGCCAGGGGCCTGCGCGCCCTGCATCTAGGCCTTTCACCCTGGATGGTGGT CGGCATGGCCATCATTCTCGGCCTTGCCATCACCGCGCTTGCGGTGCGCAGCAATCAGCGCGGCAAGACATATATGATAC AGAATCTCATAGACAGGGCCGAAGCCCTCATCTGGGCCTTGGAAGCCGGCGCGCGCACAGGGCTGTGCACGCCTCTGGGC ACGTTGGGTACAACTGACGGCCTTCAATCCTTGCTGACGGAAACCGCCAAGCAGCCCGGCATTGTTTTTATGGCTGTAGC CAGTGATGAAGGTAAAATGCTTGCCTACAGCGTGCCTGTGCGCAACAGGGACAGAAGCCGGCCAGAGCGCGAAAACGCAT CTCCGCGAGAAATGACGGGCGTGCAGCCCGGTGAGCGGGCACTGGCCCTCATCATGCCCACCGGGGTGCAGGTAACAGAA AAGCCCGCCTGGCGCATACGGCAGTGGAACGGAAAAAAAGTTTTTGAGGTTTACCGGGCTTTTGTGCCGCTGGCTGATGT TCGGCCCATGCCCATGCCCATGCCCATGCGCGGGCATGGGCAACATATGGGCCGCGGGCGCAGTATGGGCGGCGCAGGCA TGCCGCATGGCCCCATGACCCTGAAAGATATGAGCCCGCCCGGTTCCATGCGGCCCATGCCGGAAGGCAGACACGGGGGC ATGTCTTCCTCCGGACCAGGCGTCATGCCTGGCGGCGCCGAAGGGCAATGGCAGCAGGAGCAGGTCCGGCAGCCCATGGG CGTGGTGGTGATCGGGCTTGACCTCAAGCCTTTTGAAGCCGCGCTGGCAGCAGATTTACGCCACAATCTCACCTCGGCGG CCCTTCTTGCGGCCCTGGGGCTTGCCGGTTTTGTTTCCCTGTTCTGGGCGCACAACTACCGCCGTTCACGACGTATGTTG CGCGATTCCCGGGCCATGGCTTCGGAGGTCGTTGCCAATCTGCCTCTGGGGCTTCTCACCAGCGACCCTTACGGCAGGGT CGCCATGGTCAACGACACGGCCCTGAGCATGTTTGAACTGGACAGAAGTACAGCTGTGTACGCGCCCCTGACCGGCCTGC CAGGTCTGGACTGGAGCGCCCTTGTGGCGGAGCTGGCCAGCGGGCGAAAGGTGCTTGAGCGTGAGTGCGCGCTCACCACA GGCCGGGCGGGAGCCGTCATCAGCCTAAGTGCGGCATCCATGCACAATCAGGATGGCGTGTTTCTCGGCAACGTGTTCAT CCTCAGGGACATAACCGAGGTCAAACGCCTGCAGGCCGACGCACAGCGCAACGACCGCCTGTCCGCCTTGGGGCATCTGG CGGCGGGTGTGGCGCACGAGGTGCGCAATCCCCTGAGCACCATCAAGGGGGTGGCCCTGTATATAGCCAAACGCATGTTG CCCGGCGGCCGGGAAGAAGAGGCCGCGCAACGCATGATTGACGAAGTGGACAGGCTCGACCGCGTGGTGTCTGAATTGCT GGAATTTGCCCGGCCCGGAGCCATCAATACGGCTGAAGCCGACCTTGCAGAAGTGATCGGCCGTGCGTTGAGGCTGGCAG AGGCTGATATGCGCTCACGGCATATTCATGTGGTTCTTGATGTGCCGCCGGGCCTGCCGCCAGTGCGCGTCAACACCGAG CGGCTTACCCAGGCCCTGCTGAATCTTTTTCTCAACGCTGCGCAGGCTATGGGGGAGGGCGGCGAACTGCGCGTGGGCGC GCGACTCTGTTCCGGCGGGCAGACCTTCTGCATCACGGTGGCCGATAACGGACCAGGCATTGCCAGAGACATTCAGGCGG CCATTTTTACGCCCTATTTTACGACCAAGCCTTCAGGCACGGGCCTTGGCCTTGCCATTGTACACCAGATTGTGGAAGGC CACGGCGGCAATGTCAGCGTGACCTCTGCGCCTGGCCGGGGTACGGAATTTACCCTTGAACTGCCGGTGCGGGGCAGGGA TGCTGCTCCGGCGGGCGGATAA
Upstream 100 bases:
>100_bases TTTACTCACATCTGGCGGCGACTGTCCAATTTTTACCCCCGGACTTGACCGGGTGGGTAAAAAATACATAATACAGTCAT CCTGCAACCAAGGAAGACCC
Downstream 100 bases:
>100_bases ATGTTCAGACAAAAACAACGGAATACTCAAGCTGCCGAGGAAGATGAAATGACTGCAAAAACGGCCGTAAAGCTGCTGGT GGTAGATGACGACCGCAATC
Product: PAS/PAC sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 673
Protein sequence:
>673_residues MKSRVSRLFSARGLRALHLGLSPWMVVGMAIILGLAITALAVRSNQRGKTYMIQNLIDRAEALIWALEAGARTGLCTPLG TLGTTDGLQSLLTETAKQPGIVFMAVASDEGKMLAYSVPVRNRDRSRPERENASPREMTGVQPGERALALIMPTGVQVTE KPAWRIRQWNGKKVFEVYRAFVPLADVRPMPMPMPMRGHGQHMGRGRSMGGAGMPHGPMTLKDMSPPGSMRPMPEGRHGG MSSSGPGVMPGGAEGQWQQEQVRQPMGVVVIGLDLKPFEAALAADLRHNLTSAALLAALGLAGFVSLFWAHNYRRSRRML RDSRAMASEVVANLPLGLLTSDPYGRVAMVNDTALSMFELDRSTAVYAPLTGLPGLDWSALVAELASGRKVLERECALTT GRAGAVISLSAASMHNQDGVFLGNVFILRDITEVKRLQADAQRNDRLSALGHLAAGVAHEVRNPLSTIKGVALYIAKRML PGGREEEAAQRMIDEVDRLDRVVSELLEFARPGAINTAEADLAEVIGRALRLAEADMRSRHIHVVLDVPPGLPPVRVNTE RLTQALLNLFLNAAQAMGEGGELRVGARLCSGGQTFCITVADNGPGIARDIQAAIFTPYFTTKPSGTGLGLAIVHQIVEG HGGNVSVTSAPGRGTEFTLELPVRGRDAAPAGG
Sequences:
>Translated_673_residues MKSRVSRLFSARGLRALHLGLSPWMVVGMAIILGLAITALAVRSNQRGKTYMIQNLIDRAEALIWALEAGARTGLCTPLG TLGTTDGLQSLLTETAKQPGIVFMAVASDEGKMLAYSVPVRNRDRSRPERENASPREMTGVQPGERALALIMPTGVQVTE KPAWRIRQWNGKKVFEVYRAFVPLADVRPMPMPMPMRGHGQHMGRGRSMGGAGMPHGPMTLKDMSPPGSMRPMPEGRHGG MSSSGPGVMPGGAEGQWQQEQVRQPMGVVVIGLDLKPFEAALAADLRHNLTSAALLAALGLAGFVSLFWAHNYRRSRRML RDSRAMASEVVANLPLGLLTSDPYGRVAMVNDTALSMFELDRSTAVYAPLTGLPGLDWSALVAELASGRKVLERECALTT GRAGAVISLSAASMHNQDGVFLGNVFILRDITEVKRLQADAQRNDRLSALGHLAAGVAHEVRNPLSTIKGVALYIAKRML PGGREEEAAQRMIDEVDRLDRVVSELLEFARPGAINTAEADLAEVIGRALRLAEADMRSRHIHVVLDVPPGLPPVRVNTE RLTQALLNLFLNAAQAMGEGGELRVGARLCSGGQTFCITVADNGPGIARDIQAAIFTPYFTTKPSGTGLGLAIVHQIVEG HGGNVSVTSAPGRGTEFTLELPVRGRDAAPAGG >Mature_673_residues MKSRVSRLFSARGLRALHLGLSPWMVVGMAIILGLAITALAVRSNQRGKTYMIQNLIDRAEALIWALEAGARTGLCTPLG TLGTTDGLQSLLTETAKQPGIVFMAVASDEGKMLAYSVPVRNRDRSRPERENASPREMTGVQPGERALALIMPTGVQVTE KPAWRIRQWNGKKVFEVYRAFVPLADVRPMPMPMPMRGHGQHMGRGRSMGGAGMPHGPMTLKDMSPPGSMRPMPEGRHGG MSSSGPGVMPGGAEGQWQQEQVRQPMGVVVIGLDLKPFEAALAADLRHNLTSAALLAALGLAGFVSLFWAHNYRRSRRML RDSRAMASEVVANLPLGLLTSDPYGRVAMVNDTALSMFELDRSTAVYAPLTGLPGLDWSALVAELASGRKVLERECALTT GRAGAVISLSAASMHNQDGVFLGNVFILRDITEVKRLQADAQRNDRLSALGHLAAGVAHEVRNPLSTIKGVALYIAKRML PGGREEEAAQRMIDEVDRLDRVVSELLEFARPGAINTAEADLAEVIGRALRLAEADMRSRHIHVVLDVPPGLPPVRVNTE RLTQALLNLFLNAAQAMGEGGELRVGARLCSGGQTFCITVADNGPGIARDIQAAIFTPYFTTKPSGTGLGLAIVHQIVEG HGGNVSVTSAPGRGTEFTLELPVRGRDAAPAGG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=50.8474576271186, Blast_Score=225, Evalue=9e-60, Organism=Escherichia coli, GI1788549, Length=348, Percent_Identity=32.183908045977, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1790300, Length=298, Percent_Identity=30.5369127516779, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1786600, Length=249, Percent_Identity=27.710843373494, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1790346, Length=250, Percent_Identity=30.4, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI48994928, Length=245, Percent_Identity=28.1632653061224, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=31.5315315315315, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788393, Length=227, Percent_Identity=29.9559471365639, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI145693157, Length=282, Percent_Identity=25.886524822695, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1790567, Length=419, Percent_Identity=26.9689737470167, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI87081816, Length=241, Percent_Identity=27.8008298755187, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI1789808, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1787894, Length=245, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788713, Length=255, Percent_Identity=24.7058823529412, Blast_Score=67, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 72040; Mature: 72040
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRVSRLFSARGLRALHLGLSPWMVVGMAIILGLAITALAVRSNQRGKTYMIQNLIDRA CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EALIWALEAGARTGLCTPLGTLGTTDGLQSLLTETAKQPGIVFMAVASDEGKMLAYSVPV HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCC RNRDRSRPERENASPREMTGVQPGERALALIMPTGVQVTEKPAWRIRQWNGKKVFEVYRA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHHEECCCCHHHHHHHHH FVPLADVRPMPMPMPMRGHGQHMGRGRSMGGAGMPHGPMTLKDMSPPGSMRPMPEGRHGG HHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC MSSSGPGVMPGGAEGQWQQEQVRQPMGVVVIGLDLKPFEAALAADLRHNLTSAALLAALG CCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LAGFVSLFWAHNYRRSRRMLRDSRAMASEVVANLPLGLLTSDPYGRVAMVNDTALSMFEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEECCHHHHHHHH DRSTAVYAPLTGLPGLDWSALVAELASGRKVLERECALTTGRAGAVISLSAASMHNQDGV CCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCE FLGNVFILRDITEVKRLQADAQRNDRLSALGHLAAGVAHEVRNPLSTIKGVALYIAKRML EEECEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGGREEEAAQRMIDEVDRLDRVVSELLEFARPGAINTAEADLAEVIGRALRLAEADMRSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC HIHVVLDVPPGLPPVRVNTERLTQALLNLFLNAAQAMGEGGELRVGARLCSGGQTFCITV EEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEHEECCCCCEEEEEE ADNGPGIARDIQAAIFTPYFTTKPSGTGLGLAIVHQIVEGHGGNVSVTSAPGRGTEFTLE ECCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEE LPVRGRDAAPAGG CCCCCCCCCCCCC >Mature Secondary Structure MKSRVSRLFSARGLRALHLGLSPWMVVGMAIILGLAITALAVRSNQRGKTYMIQNLIDRA CCHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EALIWALEAGARTGLCTPLGTLGTTDGLQSLLTETAKQPGIVFMAVASDEGKMLAYSVPV HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCC RNRDRSRPERENASPREMTGVQPGERALALIMPTGVQVTEKPAWRIRQWNGKKVFEVYRA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHHEECCCCHHHHHHHHH FVPLADVRPMPMPMPMRGHGQHMGRGRSMGGAGMPHGPMTLKDMSPPGSMRPMPEGRHGG HHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC MSSSGPGVMPGGAEGQWQQEQVRQPMGVVVIGLDLKPFEAALAADLRHNLTSAALLAALG CCCCCCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH LAGFVSLFWAHNYRRSRRMLRDSRAMASEVVANLPLGLLTSDPYGRVAMVNDTALSMFEL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEECCHHHHHHHH DRSTAVYAPLTGLPGLDWSALVAELASGRKVLERECALTTGRAGAVISLSAASMHNQDGV CCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCE FLGNVFILRDITEVKRLQADAQRNDRLSALGHLAAGVAHEVRNPLSTIKGVALYIAKRML EEECEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PGGREEEAAQRMIDEVDRLDRVVSELLEFARPGAINTAEADLAEVIGRALRLAEADMRSR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC HIHVVLDVPPGLPPVRVNTERLTQALLNLFLNAAQAMGEGGELRVGARLCSGGQTFCITV EEEEEEECCCCCCCCEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEHEECCCCCEEEEEE ADNGPGIARDIQAAIFTPYFTTKPSGTGLGLAIVHQIVEGHGGNVSVTSAPGRGTEFTLE ECCCCCHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEE LPVRGRDAAPAGG CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]