| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220904005
Identifier: 220904005
GI number: 220904005
Start: 856208
End: 857899
Strand: Direct
Name: 220904005
Synonym: Ddes_0731
Alternate gene names: NA
Gene position: 856208-857899 (Clockwise)
Preceding gene: 220904004
Following gene: 220904006
Centisome position: 29.8
GC content: 61.35
Gene sequence:
>1692_bases ATGCCTGCCGTTCCGCGTCCGGGGGCCTGCCGTCCGGTTTTTGCGCGCCGTATGCTTATGGCTTTTGTGTTTCTGGCCCT CGGCATGGGGGCTGCCCTTGGCCTTGCTGCGCATCTGTCTTTTGAATATCTGGGCAGCTATCTTGTGGGCTGGCATGCAA GGCCGGTGATGGAAACCCTTATCGAGGCCGAAAAGCGCGCCTGGGAAGCGGAAGACAGTGGCCGGGACCGGCTGTATTAC GGTGAAGATCTGGCAACGGCCATGCACTGGACGTTTCTTGTGGGCAAGCAGGTTTCGCCGCAATGGCGGGAACTGCCCGA TGGCCTGCACTTTATGGATGACGGCAAGGAATTTGTTCTGATCGAGCGTCGTGATGGGGTGGAGTACGCGCTCAAGGGCG GCACGGGAGCTTTTCAGGCGCTGAAAAGCCGGTTTAACGGCATCCTGCTGTTCTGCGCTCTGACCGGGCTTGCTGTGGCT GTCGCTCTGGCCGTTATTTTGAGCCGCCGCCTCACCGGACCGCTGCGCCGTCTCACCCTCGCGGTGGAAAGCCGCCTGCC GGGCGGCCTGTCTTTTTCCGCAACAGGCGCGGCCGAAAATATGGCGACCGCCATGCCCGGGGGACCTGACGCCGCCCGGC AGAGTCTGACGCAAACTCCGTGTCCGCCGGATTCCGTCCTGCTCGCAGACCCGGGCCAGATCATGCGTCCGCACATGTCG CCCGGGCCTGTACCCATGACGGATATGGACGACGAGGTGGGTGTTCTCGCCCGCGCCATTGCCGCCCGTGAGGAGGCGCT CTACCGTTTCGTGCAGCGCGAAAGCCATTTTACCGGCGACGTAAGCCACGAACTGCGCACACCGCTGACGGTCATGCAGG GCGGGCTTGAAGTTCTTGAGGCACGTCTGCAGAATCTGGTCAGAGCGACCCCTCAGGCCGGAGAGCTTGTTCCTGTTGTG GGGCGTCTTTTGCGTACCACATCCGACATGACCCGCACCGTACGCACGCTTCTTTTGCTGGCCCGGAAACCCGGAGAAAT ACAGGCTGCTGCGCTGGACTGTTCGCTGATTTTGCGGGATATCATAAACGAAATGGAGCGCGAAGGTGTTGTATGTCCGG TGGAGTTTCCGCAGACGCCTTCACACGCTCAGGCAGACAGTCTGGCCGCCATGCTGGCACTGCTCGAGGGCGGCGATCGC CTGCCCGAATTGACTCCGGTGGCGGCTTCGTCAGTGGTCTGGTCCAGGCTACAGGAAGCAGCCCCGGCTGATCCGCGTTC CTCTGGCGCTGCCGGGGTGTTTCTGGCCGTGGGCCTGTCCTCGCCTGTTCCGGTATGCGGACAAAAAGAGCTGATAACCG TCATATTCAAGAATTTGCTGGACAATGCCCGCCAGTACACCGAAAATAGGCGCGCTTTTGTATTGCTTGAGTCCGGCAGG ATGCTGGTCGGCAATAAGGGCCACATTGTTCGTGATGTGGATATTTTTTCGCGCGGCGTCAGCCGCTCCTGTAACAACGG TCAGCAATCCGCCCGGGAAGGGGCGGGCAACGGGCTGGGGCTTTCCCTTGCCCAGCGGGCCTGCGAGCGTATGGGCTGGC GGCTCGAGCTTGCGTCACTTCCCGCAGGCGTGGATGGAGTGACCGTTTTCAGCCTTATTTTCCCCCCGGCAGCCCAAGGA GAAGACGTATAA
Upstream 100 bases:
>100_bases GTCCGGACGCATCTGAAGAAGACGAAGCACCCGAACCGGGCATGCCGGGTGCGGGGAGTGGCTCTTCCGGCATGAAGATA GCCGGCGCGGAGAACACCTG
Downstream 100 bases:
>100_bases TGCCCGTTATTCAACATAGGCCTGTTTCCGGCCTGCTTTCAGGACGCCGCAAGGCAGTGGTCCTGATACTGGCCCTTCTG GCTCTTGCCGCGGGCTGGAA
Product: histidine kinase
Products: NA
Alternate protein names: Sensor Histidine Kinase ColS
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MPAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETLIEAEKRAWEAEDSGRDRLYY GEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVLIERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVA VALAVILSRRLTGPLRRLTLAVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLEARLQNLVRATPQAGELVPVV GRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRDIINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDR LPELTPVAASSVVWSRLQEAAPADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASLPAGVDGVTVFSLIFPPAAQG EDV
Sequences:
>Translated_563_residues MPAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETLIEAEKRAWEAEDSGRDRLYY GEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVLIERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVA VALAVILSRRLTGPLRRLTLAVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLEARLQNLVRATPQAGELVPVV GRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRDIINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDR LPELTPVAASSVVWSRLQEAAPADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASLPAGVDGVTVFSLIFPPAAQG EDV >Mature_562_residues PAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETLIEAEKRAWEAEDSGRDRLYYG EDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVLIERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVAV ALAVILSRRLTGPLRRLTLAVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMSP GPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLEARLQNLVRATPQAGELVPVVG RLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRDIINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDRL PELTPVAASSVVWSRLQEAAPADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGRM LVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASLPAGVDGVTVFSLIFPPAAQGE DV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60647; Mature: 60516
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEAEKRAWEAEDSGRDRLYYGEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVL HHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEE IERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVAVALAVILSRRLTGPLRRLTL EECCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS HHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHCCCCC PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH ARLQNLVRATPQAGELVPVVGRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRD HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH IINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDRLPELTPVAASSVVWSRLQEA HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH APADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASL EEECCCCCEEEEHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCC PAGVDGVTVFSLIFPPAAQGEDV CCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PAVPRPGACRPVFARRMLMAFVFLALGMGAALGLAAHLSFEYLGSYLVGWHARPVMETL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH IEAEKRAWEAEDSGRDRLYYGEDLATAMHWTFLVGKQVSPQWRELPDGLHFMDDGKEFVL HHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEE IERRDGVEYALKGGTGAFQALKSRFNGILLFCALTGLAVAVALAVILSRRLTGPLRRLTL EECCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH AVESRLPGGLSFSATGAAENMATAMPGGPDAARQSLTQTPCPPDSVLLADPGQIMRPHMS HHHHCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCEEEECCHHHHCCCCC PGPVPMTDMDDEVGVLARAIAAREEALYRFVQRESHFTGDVSHELRTPLTVMQGGLEVLE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHH ARLQNLVRATPQAGELVPVVGRLLRTTSDMTRTVRTLLLLARKPGEIQAAALDCSLILRD HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH IINEMEREGVVCPVEFPQTPSHAQADSLAAMLALLEGGDRLPELTPVAASSVVWSRLQEA HHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH APADPRSSGAAGVFLAVGLSSPVPVCGQKELITVIFKNLLDNARQYTENRRAFVLLESGR CCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC MLVGNKGHIVRDVDIFSRGVSRSCNNGQQSAREGAGNGLGLSLAQRACERMGWRLELASL EEECCCCCEEEEHHHHHHHHCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCEEEECCC PAGVDGVTVFSLIFPPAAQGEDV CCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA