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The map label for this gene is ygiW [H]

Identifier: 220904002

GI number: 220904002

Start: 854584

End: 854967

Strand: Direct

Name: ygiW [H]

Synonym: Ddes_0728

Alternate gene names: 220904002

Gene position: 854584-854967 (Clockwise)

Preceding gene: 220904001

Following gene: 220904003

Centisome position: 29.74

GC content: 54.17

Gene sequence:

>384_bases
ATGCGCGTAGTGCTTTCATTACTGTTGTTGGGCCTTCTGGCCCTGCCGGCTTACGCCGCTTTTCAGGGACCCGGTTCGGA
CGCTTCCGGCGGCTTCAAAGGGCCGACGGTGGGAGTTGAGGTTACGACCGTCAAGCAGGCGCTGGACAGCAAGGACAATA
CCCCTGTCATGTTTACCGGTCATATCACGGGTCGCAAGGCCGGCAGTGACAACAAATATATTTTCAGGGATGCCACTGGT
GAAATGACGGTGGATATAGACAAAAAAATCTTTTCCGGCCATACCGTCACACCCGAAAACACCGTGCGCCTTTCCGGCAA
GGTGGATAAGGATATGCTGAAGCCGGTCAAGGTTGATGTCAAGGTGCTGGAAGTCCTGAACTGA

Upstream 100 bases:

>100_bases
GCCCTGCGGTCCGTTTTTTACCCCGCAGGGCATGTCGGCCGCTTCCGGCCCGTTGTCGGCAGCGGCTGTAAAATAAACAC
TGATCCATAAGGAGGCTGCC

Downstream 100 bases:

>100_bases
TTGCAGTGGGCGGCCGGGCTTGTGCCCGGCCGCCCGGCAGTGGAGAACGGTTATGCGTGTACTGGCAGTGCTGCTGGCTC
TGACTCTTGGGCTTTCCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MRVVLSLLLLGLLALPAYAAFQGPGSDASGGFKGPTVGVEVTTVKQALDSKDNTPVMFTGHITGRKAGSDNKYIFRDATG
EMTVDIDKKIFSGHTVTPENTVRLSGKVDKDMLKPVKVDVKVLEVLN

Sequences:

>Translated_127_residues
MRVVLSLLLLGLLALPAYAAFQGPGSDASGGFKGPTVGVEVTTVKQALDSKDNTPVMFTGHITGRKAGSDNKYIFRDATG
EMTVDIDKKIFSGHTVTPENTVRLSGKVDKDMLKPVKVDVKVLEVLN
>Mature_127_residues
MRVVLSLLLLGLLALPAYAAFQGPGSDASGGFKGPTVGVEVTTVKQALDSKDNTPVMFTGHITGRKAGSDNKYIFRDATG
EMTVDIDKKIFSGHTVTPENTVRLSGKVDKDMLKPVKVDVKVLEVLN

Specific function: Unknown

COG id: COG3111

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1709 [H]

Homologues:

Organism=Escherichia coli, GI1789401, Length=127, Percent_Identity=41.7322834645669, Blast_Score=86, Evalue=8e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016052
- InterPro:   IPR005220 [H]

Pfam domain/function: PF04076 BOF [H]

EC number: NA

Molecular weight: Translated: 13547; Mature: 13547

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVLSLLLLGLLALPAYAAFQGPGSDASGGFKGPTVGVEVTTVKQALDSKDNTPVMFTG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCEEEEE
HITGRKAGSDNKYIFRDATGEMTVDIDKKIFSGHTVTPENTVRLSGKVDKDMLKPVKVDV
CCCCCCCCCCCCEEEECCCCCEEEEECCHHHCCCCCCCCCEEEECCCCCCHHHCCHHHHH
KVLEVLN
HEEEECC
>Mature Secondary Structure
MRVVLSLLLLGLLALPAYAAFQGPGSDASGGFKGPTVGVEVTTVKQALDSKDNTPVMFTG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCCEEEEE
HITGRKAGSDNKYIFRDATGEMTVDIDKKIFSGHTVTPENTVRLSGKVDKDMLKPVKVDV
CCCCCCCCCCCCEEEECCCCCEEEEECCHHHCCCCCCCCCEEEECCCCCCHHHCCHHHHH
KVLEVLN
HEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]