| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is ygiW [C]
Identifier: 220904003
GI number: 220904003
Start: 855020
End: 855424
Strand: Direct
Name: ygiW [C]
Synonym: Ddes_0729
Alternate gene names: 220904003
Gene position: 855020-855424 (Clockwise)
Preceding gene: 220904002
Following gene: 220904004
Centisome position: 29.76
GC content: 59.01
Gene sequence:
>405_bases ATGCGTGTACTGGCAGTGCTGCTGGCTCTGACTCTTGGGCTTTCCTGGTTTTTTTCGCCGGGCGCCCGTGTGGCGGCTGC GGGCTTTGAAGGTCCCGGTGTGGCATCCACAATTACCCGCGCGGCGGATGTGCTGGGCGCGCAAGATGATGCCCCCTGTG TGCTTGAGGGGCATATTCTGGAAAAACTGCCCCGCCGTAAAAATCGCTATCTGTTTGAAGATAAGAGCGGCAGAGTAGTG GTGGAGATAAGGAATGAGGTGTTCGGCCATCTTACCGTAACCCCGCGCGACAAGGTGCGCCTGCTCGGTCATGTGGACTG GAACCGCAAGCGCCCCAATGAGGTAGAGGTGGACGGTCTGGCCATTATCGGCATCATTGACGTGCGGGACACGCCCGAGC GCTAA
Upstream 100 bases:
>100_bases CTGAAGCCGGTCAAGGTTGATGTCAAGGTGCTGGAAGTCCTGAACTGATTGCAGTGGGCGGCCGGGCTTGTGCCCGGCCG CCCGGCAGTGGAGAACGGTT
Downstream 100 bases:
>100_bases GGCCATGTCCTGTTCCCTGCTGCTTGTGGAAGACAACGAGGACATCCTCGCTAACCTGTACGCCTACCTTGAACCGCTGG GCTACACGCTGGACTGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRVLAVLLALTLGLSWFFSPGARVAAAGFEGPGVASTITRAADVLGAQDDAPCVLEGHILEKLPRRKNRYLFEDKSGRVV VEIRNEVFGHLTVTPRDKVRLLGHVDWNRKRPNEVEVDGLAIIGIIDVRDTPER
Sequences:
>Translated_134_residues MRVLAVLLALTLGLSWFFSPGARVAAAGFEGPGVASTITRAADVLGAQDDAPCVLEGHILEKLPRRKNRYLFEDKSGRVV VEIRNEVFGHLTVTPRDKVRLLGHVDWNRKRPNEVEVDGLAIIGIIDVRDTPER >Mature_134_residues MRVLAVLLALTLGLSWFFSPGARVAAAGFEGPGVASTITRAADVLGAQDDAPCVLEGHILEKLPRRKNRYLFEDKSGRVV VEIRNEVFGHLTVTPRDKVRLLGHVDWNRKRPNEVEVDGLAIIGIIDVRDTPER
Specific function: Unknown
COG id: COG3111
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14793; Mature: 14793
Theoretical pI: Translated: 8.53; Mature: 8.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLAVLLALTLGLSWFFSPGARVAAAGFEGPGVASTITRAADVLGAQDDAPCVLEGHIL CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHH EKLPRRKNRYLFEDKSGRVVVEIRNEVFGHLTVTPRDKVRLLGHVDWNRKRPNEVEVDGL HHCCCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCE AIIGIIDVRDTPER EEEEEEECCCCCCC >Mature Secondary Structure MRVLAVLLALTLGLSWFFSPGARVAAAGFEGPGVASTITRAADVLGAQDDAPCVLEGHIL CHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECHHH EKLPRRKNRYLFEDKSGRVVVEIRNEVFGHLTVTPRDKVRLLGHVDWNRKRPNEVEVDGL HHCCCCCCCEEEECCCCEEEEEEECCCCEEEEECCCCCEEEEEECCCCCCCCCEEEECCE AIIGIIDVRDTPER EEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA