| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is cobP [H]
Identifier: 220903975
GI number: 220903975
Start: 832292
End: 832999
Strand: Direct
Name: cobP [H]
Synonym: Ddes_0701
Alternate gene names: 220903975
Gene position: 832292-832999 (Clockwise)
Preceding gene: 220903974
Following gene: 220903976
Centisome position: 28.97
GC content: 63.56
Gene sequence:
>708_bases ATGGCCCAGCGCTGGGCCGAGGCCGTGGCCCCGCAGCGGCTGTATCTTGCGACCTGCCGGGCGGAAGATGAAGAAATGAA CCGGCGCGTGGCCCGGCATCAGGCCATGCGCGGGTCAGGCTGGCAGTGCCTTGAGGAGCCGCTGGAGCTTGCGGGCGCTT TTGACCGCATTTTTGCGGATGTTGCGCAGGCGGGCGCGATGGTTACAGGTGTGCGTGGCGGCCTGCCCGTTTGTGTGTCC GCTGACATGCCTGCCGAAGTTGTGGGTAAAGTGCCTGGTCTTGGTCTGTCCGGCGTACAGCTTGGGATAAAGCCGGAAAT GCAGCCCGGAATGCTGTCCGAAATGGAGCATGGCGCACGGCCTGAGCAGGAGGCTGCCCAGCAATCTGCTCCGAAGCCGG GCGTTCTCCTGCTGGACTGCATAAGTCTGTGGATTGCCAATCTGTTGGCCTGTGACCTGGGGCAGGAAGATATTTTATGC AAGGTGTCGGCCCTCGGCGAGCGGCTGGCAGCGCCTCCCCTGCCCGTGGCTGTGGTCAGCGCCGAAACGGGGCTGGGGCT TGTGCCCATGTCGCCTTTGGCGCGGACCTTCAATGACGTTCTGGGGCTGGCCAATCAGGAACTGGCGCGTGCCTGCCGTC ATGTTGTTTTTGTCAGTTGCGGCCTGCCCCTGCCTCTCAAGGGGGGGCTGCCGGAGGAATTATGCTGA
Upstream 100 bases:
>100_bases GGCTCGAGGCCGTGGATGCACCTGTTCAGGTGGGCGGTCAGGGGCGTTGAGCGCGCCTTGTGTTTTTTTTGTGGGCGGCA CGCGCAGCGGAAAAAGCGGC
Downstream 100 bases:
>100_bases AATTTGCCCGTTTGGGCTGCGCGGCGGCACGAGCCGCCATTTTACCGTTACCTGTGGCTTTTTTACTGCTGTTTCTTCTT GCCGGGTCTGTCATCGCAGC
Product: Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase-like protein
Products: NA
Alternate protein names: Adenosylcobinamide kinase; Adenosylcobinamide-phosphate guanylyltransferase [H]
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAQRWAEAVAPQRLYLATCRAEDEEMNRRVARHQAMRGSGWQCLEEPLELAGAFDRIFADVAQAGAMVTGVRGGLPVCVS ADMPAEVVGKVPGLGLSGVQLGIKPEMQPGMLSEMEHGARPEQEAAQQSAPKPGVLLLDCISLWIANLLACDLGQEDILC KVSALGERLAAPPLPVAVVSAETGLGLVPMSPLARTFNDVLGLANQELARACRHVVFVSCGLPLPLKGGLPEELC
Sequences:
>Translated_235_residues MAQRWAEAVAPQRLYLATCRAEDEEMNRRVARHQAMRGSGWQCLEEPLELAGAFDRIFADVAQAGAMVTGVRGGLPVCVS ADMPAEVVGKVPGLGLSGVQLGIKPEMQPGMLSEMEHGARPEQEAAQQSAPKPGVLLLDCISLWIANLLACDLGQEDILC KVSALGERLAAPPLPVAVVSAETGLGLVPMSPLARTFNDVLGLANQELARACRHVVFVSCGLPLPLKGGLPEELC >Mature_234_residues AQRWAEAVAPQRLYLATCRAEDEEMNRRVARHQAMRGSGWQCLEEPLELAGAFDRIFADVAQAGAMVTGVRGGLPVCVSA DMPAEVVGKVPGLGLSGVQLGIKPEMQPGMLSEMEHGARPEQEAAQQSAPKPGVLLLDCISLWIANLLACDLGQEDILCK VSALGERLAAPPLPVAVVSAETGLGLVPMSPLARTFNDVLGLANQELARACRHVVFVSCGLPLPLKGGLPEELC
Specific function: Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate [H]
COG id: COG2087
COG function: function code H; Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003203 [H]
Pfam domain/function: PF02283 CobU [H]
EC number: =2.7.1.156; =2.7.7.62 [H]
Molecular weight: Translated: 24852; Mature: 24721
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQRWAEAVAPQRLYLATCRAEDEEMNRRVARHQAMRGSGWQCLEEPLELAGAFDRIFAD CCHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VAQAGAMVTGVRGGLPVCVSADMPAEVVGKVPGLGLSGVQLGIKPEMQPGMLSEMEHGAR HHHHCHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHCCC PEQEAAQQSAPKPGVLLLDCISLWIANLLACDLGQEDILCKVSALGERLAAPPLPVAVVS CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEE AETGLGLVPMSPLARTFNDVLGLANQELARACRHVVFVSCGLPLPLKGGLPEELC CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQRWAEAVAPQRLYLATCRAEDEEMNRRVARHQAMRGSGWQCLEEPLELAGAFDRIFAD CHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH VAQAGAMVTGVRGGLPVCVSADMPAEVVGKVPGLGLSGVQLGIKPEMQPGMLSEMEHGAR HHHHCHHHHCCCCCCCEEEECCCCHHHHHCCCCCCCCCEEECCCCCCCCCHHHHHHHCCC PEQEAAQQSAPKPGVLLLDCISLWIANLLACDLGQEDILCKVSALGERLAAPPLPVAVVS CHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEE AETGLGLVPMSPLARTFNDVLGLANQELARACRHVVFVSCGLPLPLKGGLPEELC CCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1655697; 1655696 [H]