| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903974
Identifier: 220903974
GI number: 220903974
Start: 830856
End: 832241
Strand: Direct
Name: 220903974
Synonym: Ddes_0700
Alternate gene names: NA
Gene position: 830856-832241 (Clockwise)
Preceding gene: 220903969
Following gene: 220903975
Centisome position: 28.92
GC content: 66.23
Gene sequence:
>1386_bases ATGAAACTGGATAAAAAACAACCCGGCGTGCCGGGCATCGTCAATCTGCCGGAGCCTGCCCCCGGCAAGGGCGGACGTAA GGTGGCTGTTCTGGCCCTTCTGGCGGTGTTGCTTGTGGGTGGCGCGGCGTTCTGGCTCTCGCGGGACAAGGACACGCGCG ACCAGTGGCGCGAACAGGCCGCCGCCGTCATCGGCAATGCCACAAGCGGCACGCCGCTGGCAGGGGTGAGTGGTGTGCTG CGCGATGCCCCGCCGCCTCCGCCTTCGGTGGTCAGCCCCTATACGGCTCCGGGCACGCTGGCCGGTCAGAACGTGCAGGG CACTGTGGCTTCGCCTTCGGATATGGCTGCGCAGGGCAGCACCGCCGCTCCTTTTACCGGGGCAGACATACCCGGACAGC CGGGACCGCGTGTTACCGAAGACAGCCGCGTGCGCCCGCAGTTTGTGGAAAGCCTGGCGGCCTATCTTGTTTCGCGTTTC AGGCCCGGCCCACGGGGCGGAACTCTCAGCGCTTCGGTGCAGAGCGTAAACCAGCGCTTTGGCTCCAAGCTTACCGGCCT TGCCGAGGGTGATGCCGGGGGCAGGGCGGCCCTGCTGCGTTATGCTTTTCATCCCACAATGGTGCAGGGGCTTTACAGCC TCTATGTAGACCGCTTTTTGGAGGCCATAGCGCGTGAGGCTCGCGCCAGGGATTTTAACGCCGAGCAGATGCATCAGCTT GAAATGGCGCTTGCGGGCCGCTTTGTGATGCTGGCCGGAGCACTGGAAGGCGTGGCGGCCACGCCTGACCTGGATGCCCG CTTGCGGCAGGTGGACGCGGCGGCGCGCAATGCCGTGGAAATAAACGGGCAAATGGCTGAAGCCGTTTTTGATTATGACC AGTTGCGTGAGTCCGGCGCTTCGCAATCGCAGCTCGGCACGGCGCAGTTGCGTGTGGATGGCCTTGGCGCGCGCTTCCGG CGGGCGCTGGAAGAGCAGGCCACAGCGCAGCGGGCGCTGGTAAGCGCCATTCGTCGTGGAGCCGGCCAGGCTATGGACGA CGATGAACTTATCTTTGTGGCCCGGTGGGCAGACCGCCGCCTGAAGCAGTATCCGCAGGCCATGAGCGCAGTGCGGACAT CAGCAGGCGTTTTGCGCGACCTTGCCCGGCGTTGCGCCCAGGCTGCCACGGGCACGCCTGCTGCTACTGGCCGCACGCCG GAGACAGGGCAGGGGGCTTTGCCTTCGCCGTCAGCTGCTCCATCATCCGCGCTGCCCCCCGCTGCTTCTGTTCCTCAGGC TCCGGCAGTGTCCACTGTGCCGCAGGCTTCTCCGGCGCTTACGCCGCCCCCGGCGCGGCTCGAGGCCGTGGATGCACCTG TTCAGGTGGGCGGTCAGGGGCGTTGA
Upstream 100 bases:
>100_bases TTGAGCGCCACGGGAACGCCGTGTCCGCCTTGTATTTTTTGGGCGGGGCTTCTTGTTTTACCTGTATAACGCTCTGCGCG CCGCCGTAAAGGAGTTGCGC
Downstream 100 bases:
>100_bases GCGCGCCTTGTGTTTTTTTTGTGGGCGGCACGCGCAGCGGAAAAAGCGGCATGGCCCAGCGCTGGGCCGAGGCCGTGGCC CCGCAGCGGCTGTATCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 461
Protein sequence:
>461_residues MKLDKKQPGVPGIVNLPEPAPGKGGRKVAVLALLAVLLVGGAAFWLSRDKDTRDQWREQAAAVIGNATSGTPLAGVSGVL RDAPPPPPSVVSPYTAPGTLAGQNVQGTVASPSDMAAQGSTAAPFTGADIPGQPGPRVTEDSRVRPQFVESLAAYLVSRF RPGPRGGTLSASVQSVNQRFGSKLTGLAEGDAGGRAALLRYAFHPTMVQGLYSLYVDRFLEAIAREARARDFNAEQMHQL EMALAGRFVMLAGALEGVAATPDLDARLRQVDAAARNAVEINGQMAEAVFDYDQLRESGASQSQLGTAQLRVDGLGARFR RALEEQATAQRALVSAIRRGAGQAMDDDELIFVARWADRRLKQYPQAMSAVRTSAGVLRDLARRCAQAATGTPAATGRTP ETGQGALPSPSAAPSSALPPAASVPQAPAVSTVPQASPALTPPPARLEAVDAPVQVGGQGR
Sequences:
>Translated_461_residues MKLDKKQPGVPGIVNLPEPAPGKGGRKVAVLALLAVLLVGGAAFWLSRDKDTRDQWREQAAAVIGNATSGTPLAGVSGVL RDAPPPPPSVVSPYTAPGTLAGQNVQGTVASPSDMAAQGSTAAPFTGADIPGQPGPRVTEDSRVRPQFVESLAAYLVSRF RPGPRGGTLSASVQSVNQRFGSKLTGLAEGDAGGRAALLRYAFHPTMVQGLYSLYVDRFLEAIAREARARDFNAEQMHQL EMALAGRFVMLAGALEGVAATPDLDARLRQVDAAARNAVEINGQMAEAVFDYDQLRESGASQSQLGTAQLRVDGLGARFR RALEEQATAQRALVSAIRRGAGQAMDDDELIFVARWADRRLKQYPQAMSAVRTSAGVLRDLARRCAQAATGTPAATGRTP ETGQGALPSPSAAPSSALPPAASVPQAPAVSTVPQASPALTPPPARLEAVDAPVQVGGQGR >Mature_461_residues MKLDKKQPGVPGIVNLPEPAPGKGGRKVAVLALLAVLLVGGAAFWLSRDKDTRDQWREQAAAVIGNATSGTPLAGVSGVL RDAPPPPPSVVSPYTAPGTLAGQNVQGTVASPSDMAAQGSTAAPFTGADIPGQPGPRVTEDSRVRPQFVESLAAYLVSRF RPGPRGGTLSASVQSVNQRFGSKLTGLAEGDAGGRAALLRYAFHPTMVQGLYSLYVDRFLEAIAREARARDFNAEQMHQL EMALAGRFVMLAGALEGVAATPDLDARLRQVDAAARNAVEINGQMAEAVFDYDQLRESGASQSQLGTAQLRVDGLGARFR RALEEQATAQRALVSAIRRGAGQAMDDDELIFVARWADRRLKQYPQAMSAVRTSAGVLRDLARRCAQAATGTPAATGRTP ETGQGALPSPSAAPSSALPPAASVPQAPAVSTVPQASPALTPPPARLEAVDAPVQVGGQGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47922; Mature: 47922
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDKKQPGVPGIVNLPEPAPGKGGRKVAVLALLAVLLVGGAAFWLSRDKDTRDQWREQA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHH AAVIGNATSGTPLAGVSGVLRDAPPPPPSVVSPYTAPGTLAGQNVQGTVASPSDMAAQGS HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC TAAPFTGADIPGQPGPRVTEDSRVRPQFVESLAAYLVSRFRPGPRGGTLSASVQSVNQRF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GSKLTGLAEGDAGGRAALLRYAFHPTMVQGLYSLYVDRFLEAIAREARARDFNAEQMHQL CHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EMALAGRFVMLAGALEGVAATPDLDARLRQVDAAARNAVEINGQMAEAVFDYDQLRESGA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCC SQSQLGTAQLRVDGLGARFRRALEEQATAQRALVSAIRRGAGQAMDDDELIFVARWADRR CHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH LKQYPQAMSAVRTSAGVLRDLARRCAQAATGTPAATGRTPETGQGALPSPSAAPSSALPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AASVPQAPAVSTVPQASPALTPPPARLEAVDAPVQVGGQGR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC >Mature Secondary Structure MKLDKKQPGVPGIVNLPEPAPGKGGRKVAVLALLAVLLVGGAAFWLSRDKDTRDQWREQA CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHH AAVIGNATSGTPLAGVSGVLRDAPPPPPSVVSPYTAPGTLAGQNVQGTVASPSDMAAQGS HHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCC TAAPFTGADIPGQPGPRVTEDSRVRPQFVESLAAYLVSRFRPGPRGGTLSASVQSVNQRF CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH GSKLTGLAEGDAGGRAALLRYAFHPTMVQGLYSLYVDRFLEAIAREARARDFNAEQMHQL CHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EMALAGRFVMLAGALEGVAATPDLDARLRQVDAAARNAVEINGQMAEAVFDYDQLRESGA HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHCCC SQSQLGTAQLRVDGLGARFRRALEEQATAQRALVSAIRRGAGQAMDDDELIFVARWADRR CHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHH LKQYPQAMSAVRTSAGVLRDLARRCAQAATGTPAATGRTPETGQGALPSPSAAPSSALPP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AASVPQAPAVSTVPQASPALTPPPARLEAVDAPVQVGGQGR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA