| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903972
Identifier: 220903972
GI number: 220903972
Start: 828984
End: 829427
Strand: Reverse
Name: 220903972
Synonym: Ddes_0698
Alternate gene names: NA
Gene position: 829427-828984 (Counterclockwise)
Preceding gene: 220903973
Following gene: 220903971
Centisome position: 28.87
GC content: 57.88
Gene sequence:
>444_bases GTGCGCGTGCCATTTCGTTTCAAAATGCAAAAAGTTCTGGACTACCGGGAACAACTGGAAGAAGAAGCCAAGGTCAATCT GGCCGTTCAGCAGGCCCGGCTGGCCGAGGCACGCGAGCGTCTCGAGCAGATACGGCAGGAACTGCATCAGGCTGAAGACG GGCTTATGAACGCCGCCCTTATGGACGCGCCAGAACGCTGGCTGCGCGAGCAGTACGTCAAGGGGCTGCGGGCCGACGCC GCCCACGAAGCCATCCAGGTGCGCATGCTGGAACAGCTGGCCGAAGAGGCCCGCCAACTGCTTGCCGCGCGTGCCATAGA CAAAAAACTGCTGGAAAAACTCAAGGAAAGGCAAAAGCAGCATCATGTTCGCGAGGAACAACTCAAGGAGCAACGCATCA ATGACGAAACAGCCACCCTCCGCTACAAAGCTCCGACTTTCTAA
Upstream 100 bases:
>100_bases AAGGCCGAAGCATCTTGTCAATACAACAAACAGCGGGCTTGGCCCGCTGTTTGCACTCTATTGAATATGGATGCCGTGCA GGCGTCAAAATCAAGGCGGT
Downstream 100 bases:
>100_bases GCTGTTCCGCTGGCTGGCGGTGCTCTGCTTTATCAAGCTTGCCATGCTTGCCATGCTTCTGCTGGATGTGCCGTTGCCCG CATGGCTTGACGGCCGCCCC
Product: flagellar export protein FliJ
Products: NA
Alternate protein names: Flagellar Biosynthesis Chaperone; Flagellar FliJ Protein
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MRVPFRFKMQKVLDYREQLEEEAKVNLAVQQARLAEARERLEQIRQELHQAEDGLMNAALMDAPERWLREQYVKGLRADA AHEAIQVRMLEQLAEEARQLLAARAIDKKLLEKLKERQKQHHVREEQLKEQRINDETATLRYKAPTF
Sequences:
>Translated_147_residues MRVPFRFKMQKVLDYREQLEEEAKVNLAVQQARLAEARERLEQIRQELHQAEDGLMNAALMDAPERWLREQYVKGLRADA AHEAIQVRMLEQLAEEARQLLAARAIDKKLLEKLKERQKQHHVREEQLKEQRINDETATLRYKAPTF >Mature_147_residues MRVPFRFKMQKVLDYREQLEEEAKVNLAVQQARLAEARERLEQIRQELHQAEDGLMNAALMDAPERWLREQYVKGLRADA AHEAIQVRMLEQLAEEARQLLAARAIDKKLLEKLKERQKQHHVREEQLKEQRINDETATLRYKAPTF
Specific function: Unknown
COG id: COG2882
COG function: function code NUO; Flagellar biosynthesis chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17498; Mature: 17498
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVPFRFKMQKVLDYREQLEEEAKVNLAVQQARLAEARERLEQIRQELHQAEDGLMNAAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDAPERWLREQYVKGLRADAAHEAIQVRMLEQLAEEARQLLAARAIDKKLLEKLKERQKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHVREEQLKEQRINDETATLRYKAPTF HHHHHHHHHHHHCCCHHHHEECCCCCC >Mature Secondary Structure MRVPFRFKMQKVLDYREQLEEEAKVNLAVQQARLAEARERLEQIRQELHQAEDGLMNAAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MDAPERWLREQYVKGLRADAAHEAIQVRMLEQLAEEARQLLAARAIDKKLLEKLKERQKQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HHVREEQLKEQRINDETATLRYKAPTF HHHHHHHHHHHHCCCHHHHEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA