Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903897

Identifier: 220903897

GI number: 220903897

Start: 751627

End: 753012

Strand: Direct

Name: 220903897

Synonym: Ddes_0622

Alternate gene names: NA

Gene position: 751627-753012 (Clockwise)

Preceding gene: 220903896

Following gene: 220903898

Centisome position: 26.16

GC content: 61.98

Gene sequence:

>1386_bases
ATGCTTTCCGAACGCGAAGTCATAAGCACCCTTAACATGCTCCGCAACGAGCACCTGGACGTGCGCACCGTCACCCTGGG
CGTGAGCCTGTTTGACTGCGTGAGCCACGACCTGGAGCTTTTTACCGCCAATGTGCAGGCCAAAATCCGCCGTTATGCCT
CACAGCTTGTTTCTGTCTGTGACGAGGTGGGAGACAAGTACGGCATTCCCGTGGTGAACAAGCGCATCAGCGTCAGCCCC
ATTGCGGTGGTGGCCGCGCCCTTTGGCCCGGACGGCATGGTGCGTGTCTGCAAAGCCCTGGACGAGGCCGCCAAAGAGGC
GGGCGTGGATTTTCTGGGCGGTTTTTCCGCCCTGGTTGAAAAGGGTTTTGCCAATGGCGACCGTGCCCTTATCGAGGCGC
TGCCCGAAGCCCTCGCGCAGACTGACCGCATATGCTCGTCCATCAACGTGGCATCGTCGCGCAGCGGCATCAATATGGAC
GCTGTGGCGCTTATGGGGCGGCAGATCCTCAGGGTGGCCGAAGCCACGGCCGACCGTGGCGGCATAGGCTGTGCCAAGCT
GGTGGTTTTTGCCAACATTCCGCAGGACGTGCCCTTCATGGCCGGGGCCTACCTTGGGGTGGGTGAACCTGATGTGGTGA
TCAACGTGGGCGTTTCCGGCCCCGGTGTGGTGAAGAAGGCCCTGGACCGGGCCCGCGAGGCGGGCCGCAATGAAAAGGGC
GCGCCCCTGACCCTGCTGGACATGGCCGAGGTGATCAAGCGCACGGCGTACAAGGTGACCCGCGTGGGTGAAATGATCGG
TACTGAAGTGGCTACCCGTCTGGGCATACCCTTTGGCGTGGCAGACCTCTCCCTGGCCCCCACCCCGGCGGTGGGCGACT
CCGTGGGCGAGATTTTCCAGAGCCTTGGGCTTTCAAGCATCGGCGCACCCGGTACAACAGCGGTGCTTGCCATGCTCAAT
GACGCGGTGAAAAAAGGCGGGGCGTTTGCCTCCTCTTCGGTGGGCGGTCTTTCGGGGGCCTTTATTCCCGTATCGGAAGA
TTCAAGCATTGAGGCGGCCGCTACCGCAGGCCTGCTCAGCATTGAAAAACTGGAAGCCATGACGAGCGTATGCTCGGTGG
GGCTGGACATGATCGCCATCCCCGGCGATACCCCGGCGGCTACCATTTCCGGCATTATCGCCGATGAAATGGCGATCGGC
ATGATCAACCACAAGACCACGGCTGTACGCCTCATACCTGTACCCGGCAAGGGCGTGGGTGAGGAGGTGTCGTTTGGCGG
CCTGCTCGGCAAGGCGGCCATCATGCCCGTGCCGGGCGGCAATGCTGAAGACTTTATCACCCTTGGGGGGCGCATTCCCG
CCCCTATCCACAGCCTGAAAAACTGA

Upstream 100 bases:

>100_bases
GCAAACGCCGTAGCGAGTGAGTCTTCACCTTGAGAACGCATATCATCAAAACCGATCTGATCCAGAGCGTTTTAGCCTTG
CAACCATACAGGATACCGCC

Downstream 100 bases:

>100_bases
TGCCGTTTGCAACCATGCCAGTATAAATGAAAAATCCCGCTTCGGCGGGATTTTTCATTTATACTGGCATGGTAAAACCT
GCGGGGCAGCACGGCGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVCDEVGDKYGIPVVNKRISVSP
IAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVEKGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMD
AVALMGRQILRVAEATADRGGIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG
APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQSLGLSSIGAPGTTAVLAMLN
DAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLSIEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIG
MINHKTTAVRLIPVPGKGVGEEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN

Sequences:

>Translated_461_residues
MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVCDEVGDKYGIPVVNKRISVSP
IAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVEKGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMD
AVALMGRQILRVAEATADRGGIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG
APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQSLGLSSIGAPGTTAVLAMLN
DAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLSIEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIG
MINHKTTAVRLIPVPGKGVGEEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN
>Mature_461_residues
MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVCDEVGDKYGIPVVNKRISVSP
IAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVEKGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMD
AVALMGRQILRVAEATADRGGIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG
APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQSLGLSSIGAPGTTAVLAMLN
DAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLSIEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIG
MINHKTTAVRLIPVPGKGVGEEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN

Specific function: Unknown

COG id: COG2848

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0210 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y622_DESDA (B8IYD5)

Other databases:

- EMBL:   CP001358
- RefSeq:   YP_002479209.1
- ProteinModelPortal:   B8IYD5
- GeneID:   7284294
- GenomeReviews:   CP001358_GR
- KEGG:   dds:Ddes_0622
- HOGENOM:   HBG296656
- ProtClustDB:   PRK05313
- HAMAP:   MF_01221
- InterPro:   IPR007841

Pfam domain/function: PF05167 DUF711

EC number: NA

Molecular weight: Translated: 47374; Mature: 47374

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVC
CCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEVGDKYGIPVVNKRISVSPIAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVE
HHHCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMDAVALMGRQILRVAEATADRG
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG
CCCHHHHEEEECCCCCCCHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC
APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
SLGLSSIGAPGTTAVLAMLNDAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLS
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH
IEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIGMINHKTTAVRLIPVPGKGVG
HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCC
EEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN
CCCCCCHHECCCEEEECCCCCCCCEEEECCCCCCCHHHCCC
>Mature Secondary Structure
MLSEREVISTLNMLRNEHLDVRTVTLGVSLFDCVSHDLELFTANVQAKIRRYASQLVSVC
CCCHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DEVGDKYGIPVVNKRISVSPIAVVAAPFGPDGMVRVCKALDEAAKEAGVDFLGGFSALVE
HHHCCCCCCCEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KGFANGDRALIEALPEALAQTDRICSSINVASSRSGINMDAVALMGRQILRVAEATADRG
HCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
GIGCAKLVVFANIPQDVPFMAGAYLGVGEPDVVINVGVSGPGVVKKALDRAREAGRNEKG
CCCHHHHEEEECCCCCCCHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCC
APLTLLDMAEVIKRTAYKVTRVGEMIGTEVATRLGIPFGVADLSLAPTPAVGDSVGEIFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
SLGLSSIGAPGTTAVLAMLNDAVKKGGAFASSSVGGLSGAFIPVSEDSSIEAAATAGLLS
HCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHH
IEKLEAMTSVCSVGLDMIAIPGDTPAATISGIIADEMAIGMINHKTTAVRLIPVPGKGVG
HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHEECCCEEEEEEECCCCCCC
EEVSFGGLLGKAAIMPVPGGNAEDFITLGGRIPAPIHSLKN
CCCCCCHHECCCEEEECCCCCCCCEEEECCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA