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The map label for this gene is ybgC [C]

Identifier: 220903880

GI number: 220903880

Start: 731851

End: 732285

Strand: Reverse

Name: ybgC [C]

Synonym: Ddes_0605

Alternate gene names: 220903880

Gene position: 732285-731851 (Counterclockwise)

Preceding gene: 220903882

Following gene: 220903877

Centisome position: 25.48

GC content: 58.16

Gene sequence:

>435_bases
GTGCATGAAGAGTTCCCCACTGCTGATATCTGGATGCCCCATCGCGTTTCATATGGTGAAACTGATACGATGGGCGTTCT
TTATTATGCTGAATATCTGCACCTTTTCGAGCGTGCCCGCAGCGAGTACATCCGCCGCTGCGGCATGAGCTACGCCGAGG
TGGAGAAGAAAGGCATCATCCTGCCGGTTCGCGAGGCCCAGTGCCGCTACCGTTCGTCTGCCCGCTATGACGACCTTGTG
TTGGTGCGGGCGGGCATCAGCGAATGGGGGCGAGCCTCAATGCGCTTTGTATATGAGATATGGAGCGAGGACAAGAAGCG
CCTTCTGGCTACCGGCATGACCCAGCACGCTCTGGTCAACGCCGAAGGCCGCCCCGTACCCGTGCCGGACTGGTTCCGCA
GCCTCACGTTTGATGCCGGAAAATCTTTGTCCTGA

Upstream 100 bases:

>100_bases
GAAGACACATGAGCAGCAGCGCCGCCAGAACCGGTCTGACCCCACAGGGCCGGTCGACCGCGCCACAAGTGCAAGGTGCA
TATAAACAAGGAGCATTCGC

Downstream 100 bases:

>100_bases
ACAAACGGAAAAACCGGAAACAAAACACCGCCGGCGAACGCTGGAACTGCATGGCGCAACCGCAAAGAACCTGCGGAATC
GACGGAAAATCTGCGGTGGA

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MHEEFPTADIWMPHRVSYGETDTMGVLYYAEYLHLFERARSEYIRRCGMSYAEVEKKGIILPVREAQCRYRSSARYDDLV
LVRAGISEWGRASMRFVYEIWSEDKKRLLATGMTQHALVNAEGRPVPVPDWFRSLTFDAGKSLS

Sequences:

>Translated_144_residues
MHEEFPTADIWMPHRVSYGETDTMGVLYYAEYLHLFERARSEYIRRCGMSYAEVEKKGIILPVREAQCRYRSSARYDDLV
LVRAGISEWGRASMRFVYEIWSEDKKRLLATGMTQHALVNAEGRPVPVPDWFRSLTFDAGKSLS
>Mature_144_residues
MHEEFPTADIWMPHRVSYGETDTMGVLYYAEYLHLFERARSEYIRRCGMSYAEVEKKGIILPVREAQCRYRSSARYDDLV
LVRAGISEWGRASMRFVYEIWSEDKKRLLATGMTQHALVNAEGRPVPVPDWFRSLTFDAGKSLS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16776; Mature: 16776

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHEEFPTADIWMPHRVSYGETDTMGVLYYAEYLHLFERARSEYIRRCGMSYAEVEKKGII
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCE
LPVREAQCRYRSSARYDDLVLVRAGISEWGRASMRFVYEIWSEDKKRLLATGMTQHALVN
EECHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEC
AEGRPVPVPDWFRSLTFDAGKSLS
CCCCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MHEEFPTADIWMPHRVSYGETDTMGVLYYAEYLHLFERARSEYIRRCGMSYAEVEKKGII
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCE
LPVREAQCRYRSSARYDDLVLVRAGISEWGRASMRFVYEIWSEDKKRLLATGMTQHALVN
EECHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEC
AEGRPVPVPDWFRSLTFDAGKSLS
CCCCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]