| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903869
Identifier: 220903869
GI number: 220903869
Start: 719151
End: 720371
Strand: Reverse
Name: 220903869
Synonym: Ddes_0594
Alternate gene names: NA
Gene position: 720371-719151 (Counterclockwise)
Preceding gene: 220903873
Following gene: 220903868
Centisome position: 25.07
GC content: 56.84
Gene sequence:
>1221_bases ATGAACATACGCGCCCTACGGCCCTACATTTTGGCAGTGCTCATGACCATTCCCGGTCTTGCCCTGCATCTGGCTCCGCC GGACATTTCTCCGTTTATCGTGACGCTGCTTTCAGGCATGGCCATTCTCGGCGCATCCTTTCTGCTCACCTGGGCCTGTG AAGTGGCGCAGATGGACATGCCGCAGGCCGTGGCAGTGGCTGTGGTGGCCTTTATCGCCGTGCTGCCCGAATATGCGGTG GACATGTACTTTACCTGGATGGCCGGCCAGCATCCCGAAAGCCCCTATTCGCACTATGCCATCGCCAATATGACCGGCGC CAACAGGCTGCTTATCGGCGTGGGCTGGTCGGCCATCGTGCTGATCTTTGCCGGGCGCTTTCACTCGGCGGTAACCCTCA ACGACGACAAACGCACCGACGTGCTTTTTCTGGCCATGGCCACGATTTATGCCCTGTTCATCCCCATCAAGGGTTCACTG ACCTGGGTGGACGGTCTGGTTCTTCTGGGCATTTACGTGTGGTATATACTTATCATCATGCGCCGCCCCGTGGAGGAAGA AGAACTGGAAGGCCCGGCCGAAGTTCTTGCCAGGCTGGCAAAAAAAATACGGCTGCGCACTGTGGGGGCTATTTTTATTT TTTCGGCCCTGGTTATTCTGGGCAATGCCGAATCTTTCAGCGAAGGGCTTGTTGCCAGCGGAAAACAGTTGAATATCAAC GAATTTCTTCTGGTACAATGGATCGCCCCCCTGGCTTCGGAAGCGCCGGAATTTATCGTGGCCGTCATGTTCGCCTCGCG AGGCAACGCCGGGCTGGCCCTAGGCTGCCTGCTTTCGTCAAAACTTAATCAATGGACCCTGCTGGTTGGCATGATACCCG GTGTATACGCGGTTTCTTCCGGTGGCCTCAGCCCTGCCATAAACCTTGACACACACCAGTTTCAGGAAATATTACTCACA GCCGGGCAGTCTCTCTTCGCCGTGGCCCTGCTGCTGGACCTGCGCCTGCATGTGCGTGAGGCCGTGTGGCTGCTGCTGCT CTTCAGCCTCCAGCTGCTTTCGCCGCTATACGAGGTGCATCTGGAGAGCCTTCTGGGCCTGCCCCACGACCCGTTGCGTC TGCACCTGTTTTACGCCAAGGTATACCTTGTGCTGGCGGTGATTCTGCTTGTCAAGAACTGGCGGCAGACCTGGGAACTT CGCAAGGGCTTCAAAGTTTAA
Upstream 100 bases:
>100_bases TCAACAGCATGGCTTTCGGGCCTGGTGCCGCCGTCGGTAAGCCGATTAGTGAGACCTTGGCGTCAACGCCAAGGTCTTTT TTTATTTTTAAGGAGACATC
Downstream 100 bases:
>100_bases TCAAAGCATGTATACTGTTGCGGGCGGGGCAAGGCCGCCGCCCGCACTTTTGCATCAACGGCCTGCATGGCCGGAGAGCA CGTATGGAACGGTACCTCGG
Product: sodium/calcium exchanger membrane protein
Products: NA
Alternate protein names: Sodium/Calcium Exchanger Family Protein; Na+/Ca2+-Exchanging Protein; Ca2+/Na+ Antiporter; Sodium/Calcium Exchanger Type Membrane Protein; Sodium/Calcium Exchanger Protein
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MNIRALRPYILAVLMTIPGLALHLAPPDISPFIVTLLSGMAILGASFLLTWACEVAQMDMPQAVAVAVVAFIAVLPEYAV DMYFTWMAGQHPESPYSHYAIANMTGANRLLIGVGWSAIVLIFAGRFHSAVTLNDDKRTDVLFLAMATIYALFIPIKGSL TWVDGLVLLGIYVWYILIIMRRPVEEEELEGPAEVLARLAKKIRLRTVGAIFIFSALVILGNAESFSEGLVASGKQLNIN EFLLVQWIAPLASEAPEFIVAVMFASRGNAGLALGCLLSSKLNQWTLLVGMIPGVYAVSSGGLSPAINLDTHQFQEILLT AGQSLFAVALLLDLRLHVREAVWLLLLFSLQLLSPLYEVHLESLLGLPHDPLRLHLFYAKVYLVLAVILLVKNWRQTWEL RKGFKV
Sequences:
>Translated_406_residues MNIRALRPYILAVLMTIPGLALHLAPPDISPFIVTLLSGMAILGASFLLTWACEVAQMDMPQAVAVAVVAFIAVLPEYAV DMYFTWMAGQHPESPYSHYAIANMTGANRLLIGVGWSAIVLIFAGRFHSAVTLNDDKRTDVLFLAMATIYALFIPIKGSL TWVDGLVLLGIYVWYILIIMRRPVEEEELEGPAEVLARLAKKIRLRTVGAIFIFSALVILGNAESFSEGLVASGKQLNIN EFLLVQWIAPLASEAPEFIVAVMFASRGNAGLALGCLLSSKLNQWTLLVGMIPGVYAVSSGGLSPAINLDTHQFQEILLT AGQSLFAVALLLDLRLHVREAVWLLLLFSLQLLSPLYEVHLESLLGLPHDPLRLHLFYAKVYLVLAVILLVKNWRQTWEL RKGFKV >Mature_406_residues MNIRALRPYILAVLMTIPGLALHLAPPDISPFIVTLLSGMAILGASFLLTWACEVAQMDMPQAVAVAVVAFIAVLPEYAV DMYFTWMAGQHPESPYSHYAIANMTGANRLLIGVGWSAIVLIFAGRFHSAVTLNDDKRTDVLFLAMATIYALFIPIKGSL TWVDGLVLLGIYVWYILIIMRRPVEEEELEGPAEVLARLAKKIRLRTVGAIFIFSALVILGNAESFSEGLVASGKQLNIN EFLLVQWIAPLASEAPEFIVAVMFASRGNAGLALGCLLSSKLNQWTLLVGMIPGVYAVSSGGLSPAINLDTHQFQEILLT AGQSLFAVALLLDLRLHVREAVWLLLLFSLQLLSPLYEVHLESLLGLPHDPLRLHLFYAKVYLVLAVILLVKNWRQTWEL RKGFKV
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44714; Mature: 44714
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRALRPYILAVLMTIPGLALHLAPPDISPFIVTLLSGMAILGASFLLTWACEVAQMDM CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PQAVAVAVVAFIAVLPEYAVDMYFTWMAGQHPESPYSHYAIANMTGANRLLIGVGWSAIV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHH LIFAGRFHSAVTLNDDKRTDVLFLAMATIYALFIPIKGSLTWVDGLVLLGIYVWYILIIM HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RRPVEEEELEGPAEVLARLAKKIRLRTVGAIFIFSALVILGNAESFSEGLVASGKQLNIN HCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH EFLLVQWIAPLASEAPEFIVAVMFASRGNAGLALGCLLSSKLNQWTLLVGMIPGVYAVSS HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHEEHHHHCCCHHEECC GGLSPAINLDTHQFQEILLTAGQSLFAVALLLDLRLHVREAVWLLLLFSLQLLSPLYEVH CCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESLLGLPHDPLRLHLFYAKVYLVLAVILLVKNWRQTWELRKGFKV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNIRALRPYILAVLMTIPGLALHLAPPDISPFIVTLLSGMAILGASFLLTWACEVAQMDM CCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PQAVAVAVVAFIAVLPEYAVDMYFTWMAGQHPESPYSHYAIANMTGANRLLIGVGWSAIV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEEEECCHHHHH LIFAGRFHSAVTLNDDKRTDVLFLAMATIYALFIPIKGSLTWVDGLVLLGIYVWYILIIM HHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH RRPVEEEELEGPAEVLARLAKKIRLRTVGAIFIFSALVILGNAESFSEGLVASGKQLNIN HCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCH EFLLVQWIAPLASEAPEFIVAVMFASRGNAGLALGCLLSSKLNQWTLLVGMIPGVYAVSS HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHEEHHHHCCCHHEECC GGLSPAINLDTHQFQEILLTAGQSLFAVALLLDLRLHVREAVWLLLLFSLQLLSPLYEVH CCCCCEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LESLLGLPHDPLRLHLFYAKVYLVLAVILLVKNWRQTWELRKGFKV HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA