| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903873
Identifier: 220903873
GI number: 220903873
Start: 723926
End: 724516
Strand: Reverse
Name: 220903873
Synonym: Ddes_0598
Alternate gene names: NA
Gene position: 724516-723926 (Counterclockwise)
Preceding gene: 220903875
Following gene: 220903869
Centisome position: 25.21
GC content: 58.04
Gene sequence:
>591_bases ATGCTTATTGACCTGAGCCTTCCGTTGACACGAAAAACTTTTGACGCCCTTTCCGCCACCACTGCCACCCTGCCACACCC TGCCCTGGAGCTTTTTGGCCATGTGGGAACCCACCTTGACCTTATGGGCAAAGCCTGGCCCCAGGAATATTTTACACGGC AGGGACGGGTATTTGACGTGCGCCACGTGAGGGGCCGCGACATAACGGCAAGTGACCTGCCCATGCAGGACATTGAGGCA GAAGATTTTGTGTTTCTGCGCACAGGCGTGCTGGAAGAGCATGCATATGCCGACAAGGCTTACGTTCACACTCCGGTGGA GCTTGCCTGGGAGCTGCTGGAAAACCTGACGCAACAGGGTGTGGCCATGATCGGAGTAGACTGCGCCGGAGTGCGCCTGC CCGGAGAACACAGGAAAGCCGACCTCTTCTGTGCGGAAGCCGGTACATTTGTGGTGGAAAACGTCTACAATCTTGGAGCA CTGTGCACTGCCGCAGGGGCAAAAACGTTTGTGGTCAGAACCTTTCCCCTGCGCCTTGAGGGCAGCACCGGCCTGCCCTG CCGCATTGTGGCCGAGCTTGCGGCTGACTGA
Upstream 100 bases:
>100_bases TGCTTGCTCGGGCAACAGTGTAACATCTTTTTGTTGACCAGGAAGCAAAACATGCCTACATTGTTTCCCGGGAAACAAAT ATGGAGTAAAAGGAGAAGCA
Downstream 100 bases:
>100_bases AGCCGGACGGTCACGCCGTGGTATGGCGGCAGCCCCCGTACCGTACCCGCAGGCAGGCGTGCCGCCACAAACGGCCGCGC CGCTTTCTCCGGCACATATC
Product: cyclase family protein
Products: NA
Alternate protein names: Polyketide Cyclase; Cyclase
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDVRHVRGRDITASDLPMQDIEA EDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQGVAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGA LCTAAGAKTFVVRTFPLRLEGSTGLPCRIVAELAAD
Sequences:
>Translated_196_residues MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDVRHVRGRDITASDLPMQDIEA EDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQGVAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGA LCTAAGAKTFVVRTFPLRLEGSTGLPCRIVAELAAD >Mature_196_residues MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDVRHVRGRDITASDLPMQDIEA EDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQGVAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGA LCTAAGAKTFVVRTFPLRLEGSTGLPCRIVAELAAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21510; Mature: 21510
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDV CEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCEEEE RHVRGRDITASDLPMQDIEAEDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQG EECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEECHHHHHHHHHHHHHHCC VAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGALCTAAGAKTFVVRTFPLRLE EEEEEECCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC GSTGLPCRIVAELAAD CCCCCCHHHHHHHHCC >Mature Secondary Structure MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDV CEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCEEEE RHVRGRDITASDLPMQDIEAEDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQG EECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEECHHHHHHHHHHHHHHCC VAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGALCTAAGAKTFVVRTFPLRLE EEEEEECCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC GSTGLPCRIVAELAAD CCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA