Definition Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome.
Accession NC_011883
Length 2,873,437

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The map label for this gene is 220903873

Identifier: 220903873

GI number: 220903873

Start: 723926

End: 724516

Strand: Reverse

Name: 220903873

Synonym: Ddes_0598

Alternate gene names: NA

Gene position: 724516-723926 (Counterclockwise)

Preceding gene: 220903875

Following gene: 220903869

Centisome position: 25.21

GC content: 58.04

Gene sequence:

>591_bases
ATGCTTATTGACCTGAGCCTTCCGTTGACACGAAAAACTTTTGACGCCCTTTCCGCCACCACTGCCACCCTGCCACACCC
TGCCCTGGAGCTTTTTGGCCATGTGGGAACCCACCTTGACCTTATGGGCAAAGCCTGGCCCCAGGAATATTTTACACGGC
AGGGACGGGTATTTGACGTGCGCCACGTGAGGGGCCGCGACATAACGGCAAGTGACCTGCCCATGCAGGACATTGAGGCA
GAAGATTTTGTGTTTCTGCGCACAGGCGTGCTGGAAGAGCATGCATATGCCGACAAGGCTTACGTTCACACTCCGGTGGA
GCTTGCCTGGGAGCTGCTGGAAAACCTGACGCAACAGGGTGTGGCCATGATCGGAGTAGACTGCGCCGGAGTGCGCCTGC
CCGGAGAACACAGGAAAGCCGACCTCTTCTGTGCGGAAGCCGGTACATTTGTGGTGGAAAACGTCTACAATCTTGGAGCA
CTGTGCACTGCCGCAGGGGCAAAAACGTTTGTGGTCAGAACCTTTCCCCTGCGCCTTGAGGGCAGCACCGGCCTGCCCTG
CCGCATTGTGGCCGAGCTTGCGGCTGACTGA

Upstream 100 bases:

>100_bases
TGCTTGCTCGGGCAACAGTGTAACATCTTTTTGTTGACCAGGAAGCAAAACATGCCTACATTGTTTCCCGGGAAACAAAT
ATGGAGTAAAAGGAGAAGCA

Downstream 100 bases:

>100_bases
AGCCGGACGGTCACGCCGTGGTATGGCGGCAGCCCCCGTACCGTACCCGCAGGCAGGCGTGCCGCCACAAACGGCCGCGC
CGCTTTCTCCGGCACATATC

Product: cyclase family protein

Products: NA

Alternate protein names: Polyketide Cyclase; Cyclase

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDVRHVRGRDITASDLPMQDIEA
EDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQGVAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGA
LCTAAGAKTFVVRTFPLRLEGSTGLPCRIVAELAAD

Sequences:

>Translated_196_residues
MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDVRHVRGRDITASDLPMQDIEA
EDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQGVAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGA
LCTAAGAKTFVVRTFPLRLEGSTGLPCRIVAELAAD
>Mature_196_residues
MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDVRHVRGRDITASDLPMQDIEA
EDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQGVAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGA
LCTAAGAKTFVVRTFPLRLEGSTGLPCRIVAELAAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21510; Mature: 21510

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDV
CEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCEEEE
RHVRGRDITASDLPMQDIEAEDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQG
EECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEECHHHHHHHHHHHHHHCC
VAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGALCTAAGAKTFVVRTFPLRLE
EEEEEECCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC
GSTGLPCRIVAELAAD
CCCCCCHHHHHHHHCC
>Mature Secondary Structure
MLIDLSLPLTRKTFDALSATTATLPHPALELFGHVGTHLDLMGKAWPQEYFTRQGRVFDV
CEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCEEEE
RHVRGRDITASDLPMQDIEAEDFVFLRTGVLEEHAYADKAYVHTPVELAWELLENLTQQG
EECCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCEEECHHHHHHHHHHHHHHCC
VAMIGVDCAGVRLPGEHRKADLFCAEAGTFVVENVYNLGALCTAAGAKTFVVRTFPLRLE
EEEEEECCCCEECCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEC
GSTGLPCRIVAELAAD
CCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA