| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903861
Identifier: 220903861
GI number: 220903861
Start: 710781
End: 712160
Strand: Reverse
Name: 220903861
Synonym: Ddes_0586
Alternate gene names: NA
Gene position: 712160-710781 (Counterclockwise)
Preceding gene: 220903868
Following gene: 220903859
Centisome position: 24.78
GC content: 60.8
Gene sequence:
>1380_bases GTGCGAAACCTGCTGGAATATGGCAAAGGCCAGATAACCGGTCTGCATGCCGCCATAGCGGCTTTTCGGCAGATGCCGCC CGCCGAGCGCTGGTTCTCCTGTCTTTTCTGGTCGTTCTGGGTCTCACTGGTCACATTTCCTTCGGGCTATGCCATTCGCG ATATCATGCCGGTGGTCTGCCTGATCTTTCTCACCCTGTATTACCGCTGCAACTGGCGTCACAGCGTATTGCGCAGGCTG GGGGCATGGCCGCTCTTCGCCTGCCTCGGGCTCATGGTCTTTATAGGCGTGGCCTTTTCGCAAAGCCCCGGCGCATCCCT GCTGCATGCCGGGTCTGGCCTCAACAAGGGGTTCATTCTGCCGTTCATCGCCATGGAGTGCGTCCGTGGAGAAAAAGATC TGCGCCGCCTGGTATGGGCCAGCGTGCTGGCCGTTTTCTGGCAGGGACTTGATGGTGTGTGGCAGGCGCAGACAGGCAGG GATTTCCTCATGGGCTACCCGCTCCACAGCGGGCGGCTGACAGGCAGTTTTGACGACTACGAAGTAGGCAACTACATTGC CCTCGCCCTCATACCGGCATTCGGCCTTTGGTTCATCCTGCGGCAGTTTTTTTCACGGTTGCCGTCACTGCTGTTGAGCA CAGCCGTTCTCTGGCCAGCTTTTTTCCTGCTGGCCGGCGCCGGCAGCCGCAGCGGAGCGCTGGCCATCGCCGCCGCCATG GGGCTGTGGCTGCTCCTGACGGGCAGCTCTTCGGTCCGCTGGAAAGGCCCGCTTTTTGCCGCAGCCGCCCTGCTTCTGAT TCTTGTGGCTCAAGGCCGCGCCCGCCTGGACGCTGTGGTGGAAGACGGCCGCTGGAGCCTGTGGAAGCTCGGCTGGCGCG TTTTTCTGGAGCACCCCTGGTTCGGCGCCGGAGCCGGGCAGTATAATGCCGCTTTTCGCAGCTTGGGCCTCAGCCCGGAA AAAGACGCCATAACCATCAGCCACCCGCACAATATCTATCTGGACATGCTGTACGCGCACGGGCTTGTGGGTTTTGCCCT GGGCATGATTTTTCTGCTGGGTTTCTCCTGGTGGGGATATACGCGCATCAGGCCACGCCTGCAGGCTGAGCGCACCCGCG AGAAAAAAGGTATTTACTGGCACATGACGGCCTGTTTCTGGATGGGCTTTGTGGCCTGGCTTTTTAACGGCATTTTCGGC CACGATTTTTACAGGGTCTGGTGGCTGGCTCTGGCCATGTGCCACCTGGGCGTCATGATCGGCGCGGTCGTCAACGGACC GGCAGGCCGGAAAGAGGCAGATGATGCGAGAACCGCAGGCAGGCCGGACGGCCTTTCCACAGTGGCGGAAATGGCGGGAA CAAAAACAGACGGCGCGTAA
Upstream 100 bases:
>100_bases GGCAAGGTTTTTGCCGCACTTGAACAAACAGAGAGTGCGGGATATAAAAGCTTCTTAATATCAAGCAGATATTTTTCTGT AACATCGCTCGGGAGGGACT
Downstream 100 bases:
>100_bases CGCACACTCACCAACAACCGGCTGGCAGGCGGAAAAACGCGCGGCGGGATACGTTTCGGGCTGGAACCGGCACGTGAAGC CTTCCGCTCCTGCATGCCTG
Product: O-antigen polymerase
Products: NA
Alternate protein names: Lipid A Core-O-Antigen Ligase-Like Protein; Lipid A Core-O-Antigen Ligase And Related S
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MRNLLEYGKGQITGLHAAIAAFRQMPPAERWFSCLFWSFWVSLVTFPSGYAIRDIMPVVCLIFLTLYYRCNWRHSVLRRL GAWPLFACLGLMVFIGVAFSQSPGASLLHAGSGLNKGFILPFIAMECVRGEKDLRRLVWASVLAVFWQGLDGVWQAQTGR DFLMGYPLHSGRLTGSFDDYEVGNYIALALIPAFGLWFILRQFFSRLPSLLLSTAVLWPAFFLLAGAGSRSGALAIAAAM GLWLLLTGSSSVRWKGPLFAAAALLLILVAQGRARLDAVVEDGRWSLWKLGWRVFLEHPWFGAGAGQYNAAFRSLGLSPE KDAITISHPHNIYLDMLYAHGLVGFALGMIFLLGFSWWGYTRIRPRLQAERTREKKGIYWHMTACFWMGFVAWLFNGIFG HDFYRVWWLALAMCHLGVMIGAVVNGPAGRKEADDARTAGRPDGLSTVAEMAGTKTDGA
Sequences:
>Translated_459_residues MRNLLEYGKGQITGLHAAIAAFRQMPPAERWFSCLFWSFWVSLVTFPSGYAIRDIMPVVCLIFLTLYYRCNWRHSVLRRL GAWPLFACLGLMVFIGVAFSQSPGASLLHAGSGLNKGFILPFIAMECVRGEKDLRRLVWASVLAVFWQGLDGVWQAQTGR DFLMGYPLHSGRLTGSFDDYEVGNYIALALIPAFGLWFILRQFFSRLPSLLLSTAVLWPAFFLLAGAGSRSGALAIAAAM GLWLLLTGSSSVRWKGPLFAAAALLLILVAQGRARLDAVVEDGRWSLWKLGWRVFLEHPWFGAGAGQYNAAFRSLGLSPE KDAITISHPHNIYLDMLYAHGLVGFALGMIFLLGFSWWGYTRIRPRLQAERTREKKGIYWHMTACFWMGFVAWLFNGIFG HDFYRVWWLALAMCHLGVMIGAVVNGPAGRKEADDARTAGRPDGLSTVAEMAGTKTDGA >Mature_459_residues MRNLLEYGKGQITGLHAAIAAFRQMPPAERWFSCLFWSFWVSLVTFPSGYAIRDIMPVVCLIFLTLYYRCNWRHSVLRRL GAWPLFACLGLMVFIGVAFSQSPGASLLHAGSGLNKGFILPFIAMECVRGEKDLRRLVWASVLAVFWQGLDGVWQAQTGR DFLMGYPLHSGRLTGSFDDYEVGNYIALALIPAFGLWFILRQFFSRLPSLLLSTAVLWPAFFLLAGAGSRSGALAIAAAM GLWLLLTGSSSVRWKGPLFAAAALLLILVAQGRARLDAVVEDGRWSLWKLGWRVFLEHPWFGAGAGQYNAAFRSLGLSPE KDAITISHPHNIYLDMLYAHGLVGFALGMIFLLGFSWWGYTRIRPRLQAERTREKKGIYWHMTACFWMGFVAWLFNGIFG HDFYRVWWLALAMCHLGVMIGAVVNGPAGRKEADDARTAGRPDGLSTVAEMAGTKTDGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51095; Mature: 51095
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLLEYGKGQITGLHAAIAAFRQMPPAERWFSCLFWSFWVSLVTFPSGYAIRDIMPVVC CCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LIFLTLYYRCNWRHSVLRRLGAWPLFACLGLMVFIGVAFSQSPGASLLHAGSGLNKGFIL HHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHH PFIAMECVRGEKDLRRLVWASVLAVFWQGLDGVWQAQTGRDFLMGYPLHSGRLTGSFDDY HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHEECCCCCCCCCCCCCCC EVGNYIALALIPAFGLWFILRQFFSRLPSLLLSTAVLWPAFFLLAGAGSRSGALAIAAAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GLWLLLTGSSSVRWKGPLFAAAALLLILVAQGRARLDAVVEDGRWSLWKLGWRVFLEHPW HHHHEEECCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC FGAGAGQYNAAFRSLGLSPEKDAITISHPHNIYLDMLYAHGLVGFALGMIFLLGFSWWGY CCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TRIRPRLQAERTREKKGIYWHMTACFWMGFVAWLFNGIFGHDFYRVWWLALAMCHLGVMI HHCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVVNGPAGRKEADDARTAGRPDGLSTVAEMAGTKTDGA HHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MRNLLEYGKGQITGLHAAIAAFRQMPPAERWFSCLFWSFWVSLVTFPSGYAIRDIMPVVC CCCHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH LIFLTLYYRCNWRHSVLRRLGAWPLFACLGLMVFIGVAFSQSPGASLLHAGSGLNKGFIL HHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHH PFIAMECVRGEKDLRRLVWASVLAVFWQGLDGVWQAQTGRDFLMGYPLHSGRLTGSFDDY HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHEECCCCCCCCCCCCCCC EVGNYIALALIPAFGLWFILRQFFSRLPSLLLSTAVLWPAFFLLAGAGSRSGALAIAAAM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH GLWLLLTGSSSVRWKGPLFAAAALLLILVAQGRARLDAVVEDGRWSLWKLGWRVFLEHPW HHHHEEECCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC FGAGAGQYNAAFRSLGLSPEKDAITISHPHNIYLDMLYAHGLVGFALGMIFLLGFSWWGY CCCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH TRIRPRLQAERTREKKGIYWHMTACFWMGFVAWLFNGIFGHDFYRVWWLALAMCHLGVMI HHCCHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAVVNGPAGRKEADDARTAGRPDGLSTVAEMAGTKTDGA HHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA