| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903675
Identifier: 220903675
GI number: 220903675
Start: 482458
End: 483591
Strand: Direct
Name: 220903675
Synonym: Ddes_0396
Alternate gene names: NA
Gene position: 482458-483591 (Clockwise)
Preceding gene: 220903673
Following gene: 220903694
Centisome position: 16.79
GC content: 50.97
Gene sequence:
>1134_bases ATGAGAAATATTATTTTTTGCGATCAATACGGTCAACTGGGCGGAGGCCAGCAGGTTTTGATGGAACTTGTCAAAGCTGC CCAAGTGAGCAAGTTTGCGGTAAAAGTACTGCTGCCAGCAGGCCCGTGCGCTGACAAACTTGAGACGCTGGGCGTTGACG TCCGGCGCATTCCAGTCTGTGTTTTGACACAGGGGAAAAAGGATTTTACGGATATTTTGCGTTTTGCGCTGTATAATATG GCTGTGTTCTTTAGGAATATCAAAGTGCTGCGCTCCAGCGATCTGATCTATATCAACGGCAACCGGCTACTGCCCGTGGC CTTGCTGGCAGAGATACTTTTGGGCAGGCAAGCGGCCTGCCATATTCATCTCAATCATGGCGTAATGGAAAAAAAGCTGT TCCGTATCTTTCTCAGGCAGCACCGCACCAAGGCCATTGTGGTGCCGTCCGAGTTCATTCAACGCGAACTGGAACACTAT GACGCAGCTTTTGTTTCACCCAAGGTGCGCATGGTGGAAAATGGATTGGATGCCCGTTTCTCGGAAACGGCTTTTGAAGA CCGTTTCTCCGGGCGACCGTTGCGGCATGTAGGTATTGTGGGCAGGGTGTCGGCAGAAAAGGGGCAGGATGTTCTGCCTG CTCTTGCGCGGCAATTTCCAGATATGGATTTTCATGTATTGGGCGATGCAGCATTTTCTTCAGCGGATTTTGATGCCGCA CTGCGCCGTGAAAGCCCGACGAACGTGCATTTTCACGGGTGGGTAGAAGATCTGCCCGCGAAGGTGCGTGAGATTGGCCT GCAAGTTTGCCTTGTGCCTTCACGTTGTCCGGAAAGTACACCTGGGTACAGCTTTGAGGCTGCTCCACTTGTTCCTTTGC AGATGGCCGCGCTCTCGTGTCTTGTGCTGGTGCGTTGCCTGGGTGCGTTGGAAGATGTGGCGAAAAACTTACAGCTAGCC TGCTTCGATTCGGATGAAGGACTTGCACCTATAATTGAAAATCTGCGGGCTCAATCAGCAGCCGAGCTCCTTGCGCAGTG CGAAAACAGTCATATGCTTGCAGTATCAAAGTATAGACACAATGCTTTTCATGAGCGACTGAAAGAACTTATGCATACGC TTATGCCAGAGTGA
Upstream 100 bases:
>100_bases TTGAAGTATGGTCTTGCCCTTGTGTATATGAATAAGCAAGCCATTTCTGGCGCGTAAAAATGAAATGCCATGAGCAAAGC ACTATTGCAGCTTTTACAAC
Downstream 100 bases:
>100_bases GAGCTTTTTGCCAAAGGCCTATCGTCTTTCAAAAGACGGCTTAGCTTGTTTCTGTGATAGCGCAGCTTTCACGTGCCGGC AGATACGATTGCTCTTGACG
Product: glycosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MRNIIFCDQYGQLGGGQQVLMELVKAAQVSKFAVKVLLPAGPCADKLETLGVDVRRIPVCVLTQGKKDFTDILRFALYNM AVFFRNIKVLRSSDLIYINGNRLLPVALLAEILLGRQAACHIHLNHGVMEKKLFRIFLRQHRTKAIVVPSEFIQRELEHY DAAFVSPKVRMVENGLDARFSETAFEDRFSGRPLRHVGIVGRVSAEKGQDVLPALARQFPDMDFHVLGDAAFSSADFDAA LRRESPTNVHFHGWVEDLPAKVREIGLQVCLVPSRCPESTPGYSFEAAPLVPLQMAALSCLVLVRCLGALEDVAKNLQLA CFDSDEGLAPIIENLRAQSAAELLAQCENSHMLAVSKYRHNAFHERLKELMHTLMPE
Sequences:
>Translated_377_residues MRNIIFCDQYGQLGGGQQVLMELVKAAQVSKFAVKVLLPAGPCADKLETLGVDVRRIPVCVLTQGKKDFTDILRFALYNM AVFFRNIKVLRSSDLIYINGNRLLPVALLAEILLGRQAACHIHLNHGVMEKKLFRIFLRQHRTKAIVVPSEFIQRELEHY DAAFVSPKVRMVENGLDARFSETAFEDRFSGRPLRHVGIVGRVSAEKGQDVLPALARQFPDMDFHVLGDAAFSSADFDAA LRRESPTNVHFHGWVEDLPAKVREIGLQVCLVPSRCPESTPGYSFEAAPLVPLQMAALSCLVLVRCLGALEDVAKNLQLA CFDSDEGLAPIIENLRAQSAAELLAQCENSHMLAVSKYRHNAFHERLKELMHTLMPE >Mature_377_residues MRNIIFCDQYGQLGGGQQVLMELVKAAQVSKFAVKVLLPAGPCADKLETLGVDVRRIPVCVLTQGKKDFTDILRFALYNM AVFFRNIKVLRSSDLIYINGNRLLPVALLAEILLGRQAACHIHLNHGVMEKKLFRIFLRQHRTKAIVVPSEFIQRELEHY DAAFVSPKVRMVENGLDARFSETAFEDRFSGRPLRHVGIVGRVSAEKGQDVLPALARQFPDMDFHVLGDAAFSSADFDAA LRRESPTNVHFHGWVEDLPAKVREIGLQVCLVPSRCPESTPGYSFEAAPLVPLQMAALSCLVLVRCLGALEDVAKNLQLA CFDSDEGLAPIIENLRAQSAAELLAQCENSHMLAVSKYRHNAFHERLKELMHTLMPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42069; Mature: 42069
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNIIFCDQYGQLGGGQQVLMELVKAAQVSKFAVKVLLPAGPCADKLETLGVDVRRIPVC CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCHHHCCEE VLTQGKKDFTDILRFALYNMAVFFRNIKVLRSSDLIYINGNRLLPVALLAEILLGRQAAC EEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCEEHHHHHHHHHHCCCCEE HIHLNHGVMEKKLFRIFLRQHRTKAIVVPSEFIQRELEHYDAAFVSPKVRMVENGLDARF EEEECCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHH SETAFEDRFSGRPLRHVGIVGRVSAEKGQDVLPALARQFPDMDFHVLGDAAFSSADFDAA HHHHHHHHCCCCCCHHHCEEEECCCCCCCHHHHHHHHHCCCCCEEEECCHHCCCCCHHHH LRRESPTNVHFHGWVEDLPAKVREIGLQVCLVPSRCPESTPGYSFEAAPLVPLQMAALSC HHCCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH LVLVRCLGALEDVAKNLQLACFDSDEGLAPIIENLRAQSAAELLAQCENSHMLAVSKYRH HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH NAFHERLKELMHTLMPE HHHHHHHHHHHHHHCCC >Mature Secondary Structure MRNIIFCDQYGQLGGGQQVLMELVKAAQVSKFAVKVLLPAGPCADKLETLGVDVRRIPVC CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHCCCHHHCCEE VLTQGKKDFTDILRFALYNMAVFFRNIKVLRSSDLIYINGNRLLPVALLAEILLGRQAAC EEECCCHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEECCCCEEHHHHHHHHHHCCCCEE HIHLNHGVMEKKLFRIFLRQHRTKAIVVPSEFIQRELEHYDAAFVSPKVRMVENGLDARF EEEECCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHH SETAFEDRFSGRPLRHVGIVGRVSAEKGQDVLPALARQFPDMDFHVLGDAAFSSADFDAA HHHHHHHHCCCCCCHHHCEEEECCCCCCCHHHHHHHHHCCCCCEEEECCHHCCCCCHHHH LRRESPTNVHFHGWVEDLPAKVREIGLQVCLVPSRCPESTPGYSFEAAPLVPLQMAALSC HHCCCCCCEEEECCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHH LVLVRCLGALEDVAKNLQLACFDSDEGLAPIIENLRAQSAAELLAQCENSHMLAVSKYRH HHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHH NAFHERLKELMHTLMPE HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA