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The map label for this gene is flgH [H]

Identifier: 220903673

GI number: 220903673

Start: 479292

End: 480011

Strand: Direct

Name: flgH [H]

Synonym: Ddes_0394

Alternate gene names: 220903673

Gene position: 479292-480011 (Clockwise)

Preceding gene: 220903672

Following gene: 220903675

Centisome position: 16.68

GC content: 59.31

Gene sequence:

>720_bases
ATGCAGGCACGTCACATCATCCCCGTCATGGCGCTGGCTTTTGCGCTGTGTGCCGCTTGCGGCGGCGGACCGCGCAAACA
TCCGGCCCTGCAGCAACCGGTTGTCGATCCGCAGGAATACAGGCAGGAGGCCAACGGGCCTGACAATCCCGGCTCTCTTT
TTGCGGCCAGTGAGCAGGATACGCTTTTCTCCGACAGCCGCGCCCGCAGGGTAGGCGATATTGTCGTGGTTAAACTGGTG
GAAAACACCAAGGCGCAGAACAAGGCCGAAACCACCGCCAATAAAAAGGGCGCCAACGATTACCAGGTGGGCGCGCTTAT
GGGGCAGGGATCGCACGGATTTATTCCCTTCCTGGGGTTAGGCCCGACCAACAGGGTGGGAACACCGGCCCTGACTACGT
CTTCTACCAGTGATCTGTCCGGCACAGGCAAGACCAAGCGTGAAAATTACGTGACAACCTCTCTGGCGGCGCGTGTCATC
CGTGTGCTGCCCGGCGGCCTGTTACAGATCGAGGGTGCGAGGGAAATTCGCGTCAACGAGGAAACAGAGTATATGGTGGT
ACGCGGCATGGTGCGCGCCAAGGATGTAAGCGCCGACAACAGCGTGCTTTCCACACAGATCGCGGATGCGAGTATCGAAT
ATTACGGCCGCGGTGTGCTGGCGGACAAGCAGAAGCCCGGCTGGTTCACGCGGCTTATGGACAATATCTGGCCTTTCTAG

Upstream 100 bases:

>100_bases
AAAACAGGTCTTCGGCATTGTCAAAAACGGCAATACCGTTGAGATAAACTAGACGTTACGCCGAACGCGGCCGGACGCGG
TTATTGAAGGAGAGGAGCAT

Downstream 100 bases:

>100_bases
GCGTGTGCGGCTGAGTGTCGTATATTAGGGCAGTGCCGTCGGAGAGCTGTTTTCCGGCGGCACTGGCATTGTTGTACCGA
CTGTACGTCTGCTCGCGTTC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MQARHIIPVMALAFALCAACGGGPRKHPALQQPVVDPQEYRQEANGPDNPGSLFAASEQDTLFSDSRARRVGDIVVVKLV
ENTKAQNKAETTANKKGANDYQVGALMGQGSHGFIPFLGLGPTNRVGTPALTTSSTSDLSGTGKTKRENYVTTSLAARVI
RVLPGGLLQIEGAREIRVNEETEYMVVRGMVRAKDVSADNSVLSTQIADASIEYYGRGVLADKQKPGWFTRLMDNIWPF

Sequences:

>Translated_239_residues
MQARHIIPVMALAFALCAACGGGPRKHPALQQPVVDPQEYRQEANGPDNPGSLFAASEQDTLFSDSRARRVGDIVVVKLV
ENTKAQNKAETTANKKGANDYQVGALMGQGSHGFIPFLGLGPTNRVGTPALTTSSTSDLSGTGKTKRENYVTTSLAARVI
RVLPGGLLQIEGAREIRVNEETEYMVVRGMVRAKDVSADNSVLSTQIADASIEYYGRGVLADKQKPGWFTRLMDNIWPF
>Mature_239_residues
MQARHIIPVMALAFALCAACGGGPRKHPALQQPVVDPQEYRQEANGPDNPGSLFAASEQDTLFSDSRARRVGDIVVVKLV
ENTKAQNKAETTANKKGANDYQVGALMGQGSHGFIPFLGLGPTNRVGTPALTTSSTSDLSGTGKTKRENYVTTSLAARVI
RVLPGGLLQIEGAREIRVNEETEYMVVRGMVRAKDVSADNSVLSTQIADASIEYYGRGVLADKQKPGWFTRLMDNIWPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=243, Percent_Identity=29.2181069958848, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 25777; Mature: 25777

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARHIIPVMALAFALCAACGGGPRKHPALQQPVVDPQEYRQEANGPDNPGSLFAASEQD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCC
TLFSDSRARRVGDIVVVKLVENTKAQNKAETTANKKGANDYQVGALMGQGSHGFIPFLGL
CHHCCHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEC
GPTNRVGTPALTTSSTSDLSGTGKTKRENYVTTSLAARVIRVLPGGLLQIEGAREIRVNE
CCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC
ETEYMVVRGMVRAKDVSADNSVLSTQIADASIEYYGRGVLADKQKPGWFTRLMDNIWPF
CCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MQARHIIPVMALAFALCAACGGGPRKHPALQQPVVDPQEYRQEANGPDNPGSLFAASEQD
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCC
TLFSDSRARRVGDIVVVKLVENTKAQNKAETTANKKGANDYQVGALMGQGSHGFIPFLGL
CHHCCHHHHHHCCEEEEEEECCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEC
GPTNRVGTPALTTSSTSDLSGTGKTKRENYVTTSLAARVIRVLPGGLLQIEGAREIRVNE
CCCCCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC
ETEYMVVRGMVRAKDVSADNSVLSTQIADASIEYYGRGVLADKQKPGWFTRLMDNIWPF
CCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA