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The map label for this gene is dcrA [H]

Identifier: 220903629

GI number: 220903629

Start: 426051

End: 427808

Strand: Reverse

Name: dcrA [H]

Synonym: Ddes_0349

Alternate gene names: 220903629

Gene position: 427808-426051 (Counterclockwise)

Preceding gene: 220903630

Following gene: 220903625

Centisome position: 14.89

GC content: 57.45

Gene sequence:

>1758_bases
ATGAAATTACAAGCTAAACTTCTGGCAGGTTTTCTCCTTTCTGCCCTGATCACGCTGTCCATGGGTATTTTTGCCGACTC
CCGCCTGCACGACATGAGCCAGGCCGATACGTTTTTGTATACACGCTCGGCGGAACCTATGGGCGACCTTATAAACATGT
CGGTGTATTTCCAGCGTATCCGTCTGGACCTGCTGACCTTTGTCACCACGGATGAAGATGCCGTAAAACAGCGCGTACGG
ACAGAAATTCCCCAATACCGGGCCATTATCGACAGCGGTACTACCAAGGTGGAATCAAGCCTGATTTCTGCTGAAGCACA
AAAGATCCTGGCGGAATACAAGCTGCGCCGTCAGGACTTCCGCACCATGACAGACGATGTCATGTCTCTGGCAAGTGATG
GCAGGCAGGCCCAGGCCTATGCCCTGCTTACCGGAAAGGGATGGGAGATATCTACCGCCTACCAGAACGCCATTGGCGAC
CTTGTGGCCTCCAAGCTTGAGCAGGGCAGGTTGCTGGCCCAGAAAAATGCCGAACTGGCTGATTCGTCCAGCTATCTTCT
CTATGTGGCTCTGGGTGCAGGCATTCTGCTTTCCATCGCCATGGGCATTCTGCTCACCCGCAACATCATGCGCCAGCTTG
GCGAAGACCCCGGCTACCTGGCCGAAGTGGCGGGCGAGATCGCACACGGCAACCTCAATGTGACGTTCAGGCCGCAAAAA
ACAGCCGGGGGCGTATATCATGTGATGCAGAACATGGTCGGTACCATGAAGGAAAAAATCGCCGAAGCCGAAGAAAAAAG
CGCTGAAGCGGCCCGTCAGGCCGATCAGGCCAACATAGCCACTCAGGAAGCACACGCCGCCAAGGCCGCCGCAGAACGTG
CCAAAGCCGAAGGGATGTTGCAAGCAGCACAACAGCTTGAAGAAGTGGTAGGTATCCTGACCTCCGCCTCCGAAGAGCTT
TCGGCGCAGATCGAACAGTCCAGCCGTGGCGCGGATGAACAGTCACAACGCGTCAGCGAAACGGCTACCGCCATGGAAGA
AATGAATGCCACCGTGCGCGAAGTTGCCAGCAACGCCGGGCACGCCTCAGAAATGTCTGACCAGGCCCACCTGCAGGCGC
AGGAAGGGGCTGCCATAGTGTCCCGCGTGGTGCAGGGCATCAACGAAGTTTCACGGCAAAGTATGGAAATCAAGCAGGAT
ATGGACACCCTGAGCCATCAGGCCGAAGGTATCGGGCAGATAATGAGCGTGATTTCCGACATTGCCGACCAGACCAACCT
GCTGGCCCTCAATGCCGCCATTGAGGCCGCCCGGGCCGGCGAGGCCGGAAGGGGCTTTGCGGTAGTGGCCGACGAGGTGC
GCAAGCTGGCTGAAAAAACTATGACCGCTACTCATGAAGTGGGCCAGGTCATCAGCGGTATTCAGGAAGGCACACGCAAA
AGTGTGGCCGGGGTGGATGTGTCCATCGGTACGATTCAGGGGGCCACCAGCCTGGCCAACCAGTCCGGCGAAACCTTGCA
CAGCATTGTTGCTCTGGTAGACCAGACCAACGATCAGGTGCGTTCCATCGCCACGGCCAGCGAAGAACAGTCCGCAGCCA
GCGACGAAATCAACCGCTCTGTGGAACAGGTTGCGGCCATTTCCAGCCAGACGGCCACCGCCATGGCACAGGCCGCGCAG
GCCACCGCGGAACTGGCGAGACAGTCTCAGGTGTTGCAGAGCCTTATCAATGACATGAAGGCTGAAGGCAGCCGTTAA

Upstream 100 bases:

>100_bases
TCAGGCCGCTTCATACGCATACCTCCTCAAAATACACCTGTTCATGCGGTTTGGAAAATATTAACCGCCGAGTGAAGCGG
CAAAATCCAAGGAAATTACT

Downstream 100 bases:

>100_bases
CATGTCTTGCGGGTGAAGGCCCCTTTTTCAAAAGGGGCCTTCACCCGCATCCGTTAGAGTAATTACCCCTTCAAATGATT
CCTTAACGGTCGGCAGAGCC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MKLQAKLLAGFLLSALITLSMGIFADSRLHDMSQADTFLYTRSAEPMGDLINMSVYFQRIRLDLLTFVTTDEDAVKQRVR
TEIPQYRAIIDSGTTKVESSLISAEAQKILAEYKLRRQDFRTMTDDVMSLASDGRQAQAYALLTGKGWEISTAYQNAIGD
LVASKLEQGRLLAQKNAELADSSSYLLYVALGAGILLSIAMGILLTRNIMRQLGEDPGYLAEVAGEIAHGNLNVTFRPQK
TAGGVYHVMQNMVGTMKEKIAEAEEKSAEAARQADQANIATQEAHAAKAAAERAKAEGMLQAAQQLEEVVGILTSASEEL
SAQIEQSSRGADEQSQRVSETATAMEEMNATVREVASNAGHASEMSDQAHLQAQEGAAIVSRVVQGINEVSRQSMEIKQD
MDTLSHQAEGIGQIMSVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATHEVGQVISGIQEGTRK
SVAGVDVSIGTIQGATSLANQSGETLHSIVALVDQTNDQVRSIATASEEQSAASDEINRSVEQVAAISSQTATAMAQAAQ
ATAELARQSQVLQSLINDMKAEGSR

Sequences:

>Translated_585_residues
MKLQAKLLAGFLLSALITLSMGIFADSRLHDMSQADTFLYTRSAEPMGDLINMSVYFQRIRLDLLTFVTTDEDAVKQRVR
TEIPQYRAIIDSGTTKVESSLISAEAQKILAEYKLRRQDFRTMTDDVMSLASDGRQAQAYALLTGKGWEISTAYQNAIGD
LVASKLEQGRLLAQKNAELADSSSYLLYVALGAGILLSIAMGILLTRNIMRQLGEDPGYLAEVAGEIAHGNLNVTFRPQK
TAGGVYHVMQNMVGTMKEKIAEAEEKSAEAARQADQANIATQEAHAAKAAAERAKAEGMLQAAQQLEEVVGILTSASEEL
SAQIEQSSRGADEQSQRVSETATAMEEMNATVREVASNAGHASEMSDQAHLQAQEGAAIVSRVVQGINEVSRQSMEIKQD
MDTLSHQAEGIGQIMSVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATHEVGQVISGIQEGTRK
SVAGVDVSIGTIQGATSLANQSGETLHSIVALVDQTNDQVRSIATASEEQSAASDEINRSVEQVAAISSQTATAMAQAAQ
ATAELARQSQVLQSLINDMKAEGSR
>Mature_585_residues
MKLQAKLLAGFLLSALITLSMGIFADSRLHDMSQADTFLYTRSAEPMGDLINMSVYFQRIRLDLLTFVTTDEDAVKQRVR
TEIPQYRAIIDSGTTKVESSLISAEAQKILAEYKLRRQDFRTMTDDVMSLASDGRQAQAYALLTGKGWEISTAYQNAIGD
LVASKLEQGRLLAQKNAELADSSSYLLYVALGAGILLSIAMGILLTRNIMRQLGEDPGYLAEVAGEIAHGNLNVTFRPQK
TAGGVYHVMQNMVGTMKEKIAEAEEKSAEAARQADQANIATQEAHAAKAAAERAKAEGMLQAAQQLEEVVGILTSASEEL
SAQIEQSSRGADEQSQRVSETATAMEEMNATVREVASNAGHASEMSDQAHLQAQEGAAIVSRVVQGINEVSRQSMEIKQD
MDTLSHQAEGIGQIMSVISDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATHEVGQVISGIQEGTRK
SVAGVDVSIGTIQGATSLANQSGETLHSIVALVDQTNDQVRSIATASEEQSAASDEINRSVEQVAAISSQTATAMAQAAQ
ATAELARQSQVLQSLINDMKAEGSR

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=269, Percent_Identity=36.8029739776952, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI2367378, Length=240, Percent_Identity=38.75, Blast_Score=128, Evalue=1e-30,
Organism=Escherichia coli, GI1788195, Length=227, Percent_Identity=39.2070484581498, Blast_Score=124, Evalue=2e-29,
Organism=Escherichia coli, GI1787690, Length=257, Percent_Identity=36.1867704280156, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1789453, Length=256, Percent_Identity=30.078125, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 62512; Mature: 62512

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLQAKLLAGFLLSALITLSMGIFADSRLHDMSQADTFLYTRSAEPMGDLINMSVYFQRI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHH
RLDLLTFVTTDEDAVKQRVRTEIPQYRAIIDSGTTKVESSLISAEAQKILAEYKLRRQDF
HHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RTMTDDVMSLASDGRQAQAYALLTGKGWEISTAYQNAIGDLVASKLEQGRLLAQKNAELA
HHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
DSSSYLLYVALGAGILLSIAMGILLTRNIMRQLGEDPGYLAEVAGEIAHGNLNVTFRPQK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCH
TAGGVYHVMQNMVGTMKEKIAEAEEKSAEAARQADQANIATQEAHAAKAAAERAKAEGML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAQQLEEVVGILTSASEELSAQIEQSSRGADEQSQRVSETATAMEEMNATVREVASNAG
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HASEMSDQAHLQAQEGAAIVSRVVQGINEVSRQSMEIKQDMDTLSHQAEGIGQIMSVISD
CHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATHEVGQVISGIQEGTRK
HHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVAGVDVSIGTIQGATSLANQSGETLHSIVALVDQTNDQVRSIATASEEQSAASDEINRS
HHCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VEQVAAISSQTATAMAQAAQATAELARQSQVLQSLINDMKAEGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLQAKLLAGFLLSALITLSMGIFADSRLHDMSQADTFLYTRSAEPMGDLINMSVYFQRI
CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHH
RLDLLTFVTTDEDAVKQRVRTEIPQYRAIIDSGTTKVESSLISAEAQKILAEYKLRRQDF
HHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RTMTDDVMSLASDGRQAQAYALLTGKGWEISTAYQNAIGDLVASKLEQGRLLAQKNAELA
HHHHHHHHHHHHCCCCCEEEEEEECCCCEEHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
DSSSYLLYVALGAGILLSIAMGILLTRNIMRQLGEDPGYLAEVAGEIAHGNLNVTFRPQK
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCH
TAGGVYHVMQNMVGTMKEKIAEAEEKSAEAARQADQANIATQEAHAAKAAAERAKAEGML
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAAQQLEEVVGILTSASEELSAQIEQSSRGADEQSQRVSETATAMEEMNATVREVASNAG
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
HASEMSDQAHLQAQEGAAIVSRVVQGINEVSRQSMEIKQDMDTLSHQAEGIGQIMSVISD
CHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATHEVGQVISGIQEGTRK
HHCCHHEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SVAGVDVSIGTIQGATSLANQSGETLHSIVALVDQTNDQVRSIATASEEQSAASDEINRS
HHCCCCEEECCCHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VEQVAAISSQTATAMAQAAQATAELARQSQVLQSLINDMKAEGSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]