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The map label for this gene is dcrA [H]

Identifier: 220903582

GI number: 220903582

Start: 365738

End: 367945

Strand: Direct

Name: dcrA [H]

Synonym: Ddes_0301

Alternate gene names: 220903582

Gene position: 365738-367945 (Clockwise)

Preceding gene: 220903581

Following gene: 220903585

Centisome position: 12.73

GC content: 59.96

Gene sequence:

>2208_bases
ATGTTGCGCGTGCGTTTGCGGCTGGAAAAAGAAACTGTTGCCCTGCTAACCAATGGAGTCTTTATGTTCGCCTGGTACCG
ATCCTTGCGCATGACGCCCAAGATTGTGATTCCCGTAGCCCTTGCTCTTGTTGTGTGTCTGGGGCTGCTGACCTGGCAGA
TTCAGACGCGCAGCAGCGCCGCTATTGAAGATATTGCCCGCCGTGAACTGGCCGCTCTCGGCGGGGCCGAGGGAAATTCC
ATGTCCCGGTTCCTGAACATGGCTGTTGACGAGGCGTCGGCCCTGGCTGCCGCCCTGGGGCAGAGTGTGGCCCAGAACGA
AGCGCCCACCAGGCAGGGTGTCATTGCCATGATCAAGGGTATGCTTATGGGCAATGCCGATATTTTCGGGGTGGGCATTA
TCTGGGAGCCAGGCCTGTTCGATAACCGCGACATGCTGTATGCGGGTGCGCCGGGCAGTGACGGCAAAGGACGCTTCATG
CCCTACCTTTCCAGAGGGGCCGAGCTTGTGGATCTTGGCGAGCAGGTCGACCAGCCTTACTATGTCATTCCCCGTAAAAC
CCGCCAGACCTACGTTTCCGACCCCATTCCCTTCAAGGTCAGCGGGCAGGACGTGCTTATGTCCACAGTGGCCTGCCCTA
TACTGCGCGGCAATGACCTTCTCGGTGTGGTGCTGGTGGATATTTCTCTTGCCCGGCTGCAACAGATGGTTGCGGCCGTC
AGCCTGTATGGCAGCGGCTACGCTTCGCTTGTCAGTGAAAAGGGTGATATTCTGGCGCATCGCGAAGAATCCCTGGTCGG
CAAGAGCATCTTCGACCTTGGCGTTGTCAGGCGCAAAGGGGCGGTTACAGAAGCGTTTACCGCCGGCAAGTCGTATATGG
AAGACGTGAGCGACGCGCAGGGTGTGCTGCTGCGCTACTTTCATCCCGTTGATTTCAGGGGCGGCAGCCAGCACTGGTAT
CTCAGCGTGACCGTGCCGCAACGTGAAGTGCTGGCGCAAGCCAGGGATATCAGCCGCATTACCGTCATTATTTCGGCCAT
AACTCTGCTGGTGTTACTCGGCATAAGCTATCTTGTCATCCGCAGCGCGTTGCGCCCGGTGAACTATCTGGCGGAAACAG
CCGGGATCATCGCCGGGGGCAAACTGGAGCAAAATATTGAAGACAGCCGCTTCGGCGGTGAAATGAAGGTGCTCAGCACG
GCTTTGAAAAAAATGATCGCCTCTTTGCTGGAGGGCATAAGCAGGGCTGAAGCCCTTACCGGGGCGGCGCGTGAAGAATC
GGAAAAGGCCCGCCTGGCCATGATGGAGGCCGAGGATGCCCGCCGGGCTGCTGAAAGCGCCCGCCGGGACGGCATGCTGG
CTGCTGCGGGGCAGCTTGAAGAGGTGGTGTCGGTGCTTTCATCTGCTTCCACAGAGCTTTCGGCCCAGATCGAGCAGTCA
GACCGGGGCGCTGCGGACTCCGCCCAGCGCCTTGCCGAGGCCGCTACGGCCATGAATGAAATGAACGCCACCGTGCAGGA
GGTCGCCCGCAATGCCAGCCAGGCTTCAGAAGCCTCGGCGGAAACCAGAAGAAGAGCGCTGGCGGGCGCGCATATCGTGG
AGCAGTCATTGCAGAGCATACGGCAGGTGCATGAGGTTTCGGGTGCGTTGCGGCAGGATATGGCGCTTCTGAACACGCAT
GCCCAGGACATCAGCCGGATCATGAGCGTCATCTCCGACATTGCTGACCAGACCAACCTTTTGGCACTCAATGCGGCCAT
TGAGGCGGCCCGTGCAGGAGACGCAGGGCGCGGATTTGCCGTGGTGGCCGATGAGGTGCGCAAGCTGGCGGAAAAAACCA
TGTCCTCCACCACCGATGTGGGCAATGCCATCAGGGCCATTCAGGAGAGCACCGCAAAAAGCATGGCCGGTATGGATGAA
GCCGTGCGGCAGGTGGAGCAGGCTACGGATTATGCCGGTCAGTCCGGTCAGGCCCTGAGCGAGATCGTCGGCACGGTGGA
GGCCACGGCGGACCAGGTAAACGCCATTGCCACGGCCAGCGAAGAGCAGTCTGCCGCCAGTGAAGAAATCAACCAGACCA
TAGTACAGATCAACAGCATGTCGCGGCAGACGGCCGAGGCCATGGCCGAGGCCGCCAGGGCTGTTACTGATCTTGCGGCT
CAGGCTCAGGCGCTGGACAGCCTCATAGACAACATGAAGCGCGGTTGA

Upstream 100 bases:

>100_bases
CTTTATGTGCGGCCTGCATGCACGAATATTTTTTTGTGCCTCCTCGTCTGGCTGCTAAAGCTAACCGAATAAATTACCGA
AAAGCTTTATGTGACCACTG

Downstream 100 bases:

>100_bases
CGCGCCACGGCAGACGCCCGAACGGGCGGCTGCCCCATGCCGCCCGAAGGCCGTGTGCAGCCAGGGCCGGGCAGGCCTGC
CCCTGAAACCCATCGTACCA

Product: Cache sensor-containing methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 735; Mature: 735

Protein sequence:

>735_residues
MLRVRLRLEKETVALLTNGVFMFAWYRSLRMTPKIVIPVALALVVCLGLLTWQIQTRSSAAIEDIARRELAALGGAEGNS
MSRFLNMAVDEASALAAALGQSVAQNEAPTRQGVIAMIKGMLMGNADIFGVGIIWEPGLFDNRDMLYAGAPGSDGKGRFM
PYLSRGAELVDLGEQVDQPYYVIPRKTRQTYVSDPIPFKVSGQDVLMSTVACPILRGNDLLGVVLVDISLARLQQMVAAV
SLYGSGYASLVSEKGDILAHREESLVGKSIFDLGVVRRKGAVTEAFTAGKSYMEDVSDAQGVLLRYFHPVDFRGGSQHWY
LSVTVPQREVLAQARDISRITVIISAITLLVLLGISYLVIRSALRPVNYLAETAGIIAGGKLEQNIEDSRFGGEMKVLST
ALKKMIASLLEGISRAEALTGAAREESEKARLAMMEAEDARRAAESARRDGMLAAAGQLEEVVSVLSSASTELSAQIEQS
DRGAADSAQRLAEAATAMNEMNATVQEVARNASQASEASAETRRRALAGAHIVEQSLQSIRQVHEVSGALRQDMALLNTH
AQDISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSSTTDVGNAIRAIQESTAKSMAGMDE
AVRQVEQATDYAGQSGQALSEIVGTVEATADQVNAIATASEEQSAASEEINQTIVQINSMSRQTAEAMAEAARAVTDLAA
QAQALDSLIDNMKRG

Sequences:

>Translated_735_residues
MLRVRLRLEKETVALLTNGVFMFAWYRSLRMTPKIVIPVALALVVCLGLLTWQIQTRSSAAIEDIARRELAALGGAEGNS
MSRFLNMAVDEASALAAALGQSVAQNEAPTRQGVIAMIKGMLMGNADIFGVGIIWEPGLFDNRDMLYAGAPGSDGKGRFM
PYLSRGAELVDLGEQVDQPYYVIPRKTRQTYVSDPIPFKVSGQDVLMSTVACPILRGNDLLGVVLVDISLARLQQMVAAV
SLYGSGYASLVSEKGDILAHREESLVGKSIFDLGVVRRKGAVTEAFTAGKSYMEDVSDAQGVLLRYFHPVDFRGGSQHWY
LSVTVPQREVLAQARDISRITVIISAITLLVLLGISYLVIRSALRPVNYLAETAGIIAGGKLEQNIEDSRFGGEMKVLST
ALKKMIASLLEGISRAEALTGAAREESEKARLAMMEAEDARRAAESARRDGMLAAAGQLEEVVSVLSSASTELSAQIEQS
DRGAADSAQRLAEAATAMNEMNATVQEVARNASQASEASAETRRRALAGAHIVEQSLQSIRQVHEVSGALRQDMALLNTH
AQDISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSSTTDVGNAIRAIQESTAKSMAGMDE
AVRQVEQATDYAGQSGQALSEIVGTVEATADQVNAIATASEEQSAASEEINQTIVQINSMSRQTAEAMAEAARAVTDLAA
QAQALDSLIDNMKRG
>Mature_735_residues
MLRVRLRLEKETVALLTNGVFMFAWYRSLRMTPKIVIPVALALVVCLGLLTWQIQTRSSAAIEDIARRELAALGGAEGNS
MSRFLNMAVDEASALAAALGQSVAQNEAPTRQGVIAMIKGMLMGNADIFGVGIIWEPGLFDNRDMLYAGAPGSDGKGRFM
PYLSRGAELVDLGEQVDQPYYVIPRKTRQTYVSDPIPFKVSGQDVLMSTVACPILRGNDLLGVVLVDISLARLQQMVAAV
SLYGSGYASLVSEKGDILAHREESLVGKSIFDLGVVRRKGAVTEAFTAGKSYMEDVSDAQGVLLRYFHPVDFRGGSQHWY
LSVTVPQREVLAQARDISRITVIISAITLLVLLGISYLVIRSALRPVNYLAETAGIIAGGKLEQNIEDSRFGGEMKVLST
ALKKMIASLLEGISRAEALTGAAREESEKARLAMMEAEDARRAAESARRDGMLAAAGQLEEVVSVLSSASTELSAQIEQS
DRGAADSAQRLAEAATAMNEMNATVQEVARNASQASEASAETRRRALAGAHIVEQSLQSIRQVHEVSGALRQDMALLNTH
AQDISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMSSTTDVGNAIRAIQESTAKSMAGMDE
AVRQVEQATDYAGQSGQALSEIVGTVEATADQVNAIATASEEQSAASEEINQTIVQINSMSRQTAEAMAEAARAVTDLAA
QAQALDSLIDNMKRG

Specific function: Mediates Taxis To The Sugars Ribose And Galactose VIa An Interaction With The Periplasmic Ribose- Or Galactose-Binding Proteins. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Trans

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=391, Percent_Identity=31.4578005115089, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1788194, Length=261, Percent_Identity=36.0153256704981, Blast_Score=115, Evalue=1e-26,
Organism=Escherichia coli, GI2367378, Length=366, Percent_Identity=28.6885245901639, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788195, Length=319, Percent_Identity=31.0344827586207, Blast_Score=103, Evalue=5e-23,
Organism=Escherichia coli, GI1789453, Length=248, Percent_Identity=27.4193548387097, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 78528; Mature: 78528

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS50885 HAMP ; PS00217 SUGAR_TRANSPORT_2 ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVRLRLEKETVALLTNGVFMFAWYRSLRMTPKIVIPVALALVVCLGLLTWQIQTRSSA
CEEEEEEECHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
AIEDIARRELAALGGAEGNSMSRFLNMAVDEASALAAALGQSVAQNEAPTRQGVIAMIKG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
MLMGNADIFGVGIIWEPGLFDNRDMLYAGAPGSDGKGRFMPYLSRGAELVDLGEQVDQPY
HHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCE
YVIPRKTRQTYVSDPIPFKVSGQDVLMSTVACPILRGNDLLGVVLVDISLARLQQMVAAV
EEECCCHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLYGSGYASLVSEKGDILAHREESLVGKSIFDLGVVRRKGAVTEAFTAGKSYMEDVSDAQ
HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GVLLRYFHPVDFRGGSQHWYLSVTVPQREVLAQARDISRITVIISAITLLVLLGISYLVI
HHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALRPVNYLAETAGIIAGGKLEQNIEDSRFGGEMKVLSTALKKMIASLLEGISRAEALT
HHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAAREESEKARLAMMEAEDARRAAESARRDGMLAAAGQLEEVVSVLSSASTELSAQIEQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC
DRGAADSAQRLAEAATAMNEMNATVQEVARNASQASEASAETRRRALAGAHIVEQSLQSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQVHEVSGALRQDMALLNTHAQDISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHH
VVADEVRKLAEKTMSSTTDVGNAIRAIQESTAKSMAGMDEAVRQVEQATDYAGQSGQALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EIVGTVEATADQVNAIATASEEQSAASEEINQTIVQINSMSRQTAEAMAEAARAVTDLAA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQALDSLIDNMKRG
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MLRVRLRLEKETVALLTNGVFMFAWYRSLRMTPKIVIPVALALVVCLGLLTWQIQTRSSA
CEEEEEEECHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHH
AIEDIARRELAALGGAEGNSMSRFLNMAVDEASALAAALGQSVAQNEAPTRQGVIAMIKG
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
MLMGNADIFGVGIIWEPGLFDNRDMLYAGAPGSDGKGRFMPYLSRGAELVDLGEQVDQPY
HHHCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHCCCE
YVIPRKTRQTYVSDPIPFKVSGQDVLMSTVACPILRGNDLLGVVLVDISLARLQQMVAAV
EEECCCHHHHHCCCCCCEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SLYGSGYASLVSEKGDILAHREESLVGKSIFDLGVVRRKGAVTEAFTAGKSYMEDVSDAQ
HHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
GVLLRYFHPVDFRGGSQHWYLSVTVPQREVLAQARDISRITVIISAITLLVLLGISYLVI
HHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSALRPVNYLAETAGIIAGGKLEQNIEDSRFGGEMKVLSTALKKMIASLLEGISRAEALT
HHHHHHHHHHHHHHHHHCCCCHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAAREESEKARLAMMEAEDARRAAESARRDGMLAAAGQLEEVVSVLSSASTELSAQIEQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHC
DRGAADSAQRLAEAATAMNEMNATVQEVARNASQASEASAETRRRALAGAHIVEQSLQSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RQVHEVSGALRQDMALLNTHAQDISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHH
VVADEVRKLAEKTMSSTTDVGNAIRAIQESTAKSMAGMDEAVRQVEQATDYAGQSGQALS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
EIVGTVEATADQVNAIATASEEQSAASEEINQTIVQINSMSRQTAEAMAEAARAVTDLAA
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAQALDSLIDNMKRG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]