| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903535
Identifier: 220903535
GI number: 220903535
Start: 298313
End: 298675
Strand: Direct
Name: 220903535
Synonym: Ddes_0254
Alternate gene names: NA
Gene position: 298313-298675 (Clockwise)
Preceding gene: 220903534
Following gene: 220903536
Centisome position: 10.38
GC content: 57.02
Gene sequence:
>363_bases ATGGCAGAATCCATGTACCGCGACCTGCTTATCGTTGACGACGACATATCCCTCGACGGCGGAGGGTATCCGGTCCTTGT CACAGATCGTCCCTGCATCGCCCAGGACATTTTGCACATGATCCGTGAGAGCGGCTTGCTTGTCGAGCTTGTGGGCGAGC GCGATGTGCGCAGGCGCAAGACGAACCTGGTCAAACTCACACTGATGGTCGACCAGGACAGCCGCATCAAGCCCGGCACA ACTGCCATTGAAGAAGTGTGGATCAGCCGGGAGCGCGTGGAATTCTGGCTTACAGCCGAAACTCTGGCCTTTGGGCGCAT ATCATTTCTGGCCATTGCGGGTAACGCAACGGAGACGACATAA
Upstream 100 bases:
>100_bases CCATGAACAACAATGGCCGCAGCGTAACCATTGGCGAGCAGCACATACACGTCGAAAACGCCACCGATATGAATGATTTT TGGACGATGGGGCTTGGGTA
Downstream 100 bases:
>100_bases TGGAAAGTTTCGCCAAAGAACTGTTCACGGGCATGGTACGCGATTCTGGCATGCCTGTGACCGAATCTGACATGCGGGCA GAGTGGGAAAAGCTTAACCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MAESMYRDLLIVDDDISLDGGGYPVLVTDRPCIAQDILHMIRESGLLVELVGERDVRRRKTNLVKLTLMVDQDSRIKPGT TAIEEVWISRERVEFWLTAETLAFGRISFLAIAGNATETT
Sequences:
>Translated_120_residues MAESMYRDLLIVDDDISLDGGGYPVLVTDRPCIAQDILHMIRESGLLVELVGERDVRRRKTNLVKLTLMVDQDSRIKPGT TAIEEVWISRERVEFWLTAETLAFGRISFLAIAGNATETT >Mature_119_residues AESMYRDLLIVDDDISLDGGGYPVLVTDRPCIAQDILHMIRESGLLVELVGERDVRRRKTNLVKLTLMVDQDSRIKPGTT AIEEVWISRERVEFWLTAETLAFGRISFLAIAGNATETT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13510; Mature: 13379
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESMYRDLLIVDDDISLDGGGYPVLVTDRPCIAQDILHMIRESGLLVELVGERDVRRRK CCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCHHHHHC TNLVKLTLMVDQDSRIKPGTTAIEEVWISRERVEFWLTAETLAFGRISFLAIAGNATETT CCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEHHHHHCCEEEEEEECCCCCCC >Mature Secondary Structure AESMYRDLLIVDDDISLDGGGYPVLVTDRPCIAQDILHMIRESGLLVELVGERDVRRRK CCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCHHHHHC TNLVKLTLMVDQDSRIKPGTTAIEEVWISRERVEFWLTAETLAFGRISFLAIAGNATETT CCEEEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEHHHHHCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA