| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903498
Identifier: 220903498
GI number: 220903498
Start: 268934
End: 269539
Strand: Direct
Name: 220903498
Synonym: Ddes_0217
Alternate gene names: NA
Gene position: 268934-269539 (Clockwise)
Preceding gene: 220903497
Following gene: 220903499
Centisome position: 9.36
GC content: 51.32
Gene sequence:
>606_bases ATGTATTTGCCGTCTGGCATAAAGCAAAATGCTCTGCGCGGTCTCCGGAAAAACGCATGTCTCTGGATGTCCTTGAGGCC CACCCCACTCTGGCCCCGGCACGCAGCTGAGACACAGCCCGCAATCGCGTTTTTCATGCGCAGCAGCTCCGGGCGCTCTT TCCTGACAGGGAGAGGGTGCCCGGTTTTACATTTTTTTCATTTTCCCACGCGACATATGACTCTTTCTTTTATGACTCGC ACAGAGATGCAAGTCTCTTTTGCATTGCCTGGGGGGGGCTCTGTGAAAATATTCTTTAATTCGGCGCTGTTGCCGGCATG GCATGCTTATTGCCTTTTATTAAGGCAACAAGCCGGGCAGGGCTTGCAATGCGCGCGGTCTGATCAAGCAAGTGGCAGCC GCCAGCAAGGAGGGTGTGGAGTATGTCTGCCGACAGAACTGCGAAGCTTTTTTGTCGTCAGGCCGGCCCTTGCCGGATGC GCGGAATGTTTTGTTGAACTATGGGATTTTGATTTCAGAGCTGTTTATGGCCGCAGTCCAACATTTTTAAGGAGTGAACT TCCATGTCAGCAAAGAACACAAATGAATATGTCAACGGGGATATAA
Upstream 100 bases:
>100_bases CCCTGTACGAGCGCGAGGGCGTGATCCTCATGACCGGCGACGCCGGCAAGACCTTTGACAGGCTGCTGGCATATGCCCAG GGAGGGCAGGCCTAGACCCG
Downstream 100 bases:
>100_bases AAAACGTATGGCACCATCTGATGCTGCATCAGGGCAATGCCCCCATGATTGCGGTAGAGGGCAAGGGCCTGTACCTCAAG GATCTTAACGGCAAGGAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MYLPSGIKQNALRGLRKNACLWMSLRPTPLWPRHAAETQPAIAFFMRSSSGRSFLTGRGCPVLHFFHFPTRHMTLSFMTR TEMQVSFALPGGGSVKIFFNSALLPAWHAYCLLLRQQAGQGLQCARSDQASGSRQQGGCGVCLPTELRSFFVVRPALAGC AECFVELWDFDFRAVYGRSPTFLRSELPCQQRTQMNMSTGI
Sequences:
>Translated_201_residues MYLPSGIKQNALRGLRKNACLWMSLRPTPLWPRHAAETQPAIAFFMRSSSGRSFLTGRGCPVLHFFHFPTRHMTLSFMTR TEMQVSFALPGGGSVKIFFNSALLPAWHAYCLLLRQQAGQGLQCARSDQASGSRQQGGCGVCLPTELRSFFVVRPALAGC AECFVELWDFDFRAVYGRSPTFLRSELPCQQRTQMNMSTGI >Mature_201_residues MYLPSGIKQNALRGLRKNACLWMSLRPTPLWPRHAAETQPAIAFFMRSSSGRSFLTGRGCPVLHFFHFPTRHMTLSFMTR TEMQVSFALPGGGSVKIFFNSALLPAWHAYCLLLRQQAGQGLQCARSDQASGSRQQGGCGVCLPTELRSFFVVRPALAGC AECFVELWDFDFRAVYGRSPTFLRSELPCQQRTQMNMSTGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22477; Mature: 22477
Theoretical pI: Translated: 10.15; Mature: 10.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLPSGIKQNALRGLRKNACLWMSLRPTPLWPRHAAETQPAIAFFMRSSSGRSFLTGRGC CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC PVLHFFHFPTRHMTLSFMTRTEMQVSFALPGGGSVKIFFNSALLPAWHAYCLLLRQQAGQ CEEEEEECCCHHEEEEEEEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC GLQCARSDQASGSRQQGGCGVCLPTELRSFFVVRPALAGCAECFVELWDFDFRAVYGRSP CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC TFLRSELPCQQRTQMNMSTGI CHHHHCCCHHHHHHCCHHCCC >Mature Secondary Structure MYLPSGIKQNALRGLRKNACLWMSLRPTPLWPRHAAETQPAIAFFMRSSSGRSFLTGRGC CCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCC PVLHFFHFPTRHMTLSFMTRTEMQVSFALPGGGSVKIFFNSALLPAWHAYCLLLRQQAGQ CEEEEEECCCHHEEEEEEEEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCCC GLQCARSDQASGSRQQGGCGVCLPTELRSFFVVRPALAGCAECFVELWDFDFRAVYGRSP CCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC TFLRSELPCQQRTQMNMSTGI CHHHHCCCHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA