| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is 220903490
Identifier: 220903490
GI number: 220903490
Start: 259223
End: 260269
Strand: Direct
Name: 220903490
Synonym: Ddes_0208
Alternate gene names: NA
Gene position: 259223-260269 (Clockwise)
Preceding gene: 220903485
Following gene: 220903491
Centisome position: 9.02
GC content: 65.14
Gene sequence:
>1047_bases GTGCCGGGGCTGGACAAGGCAGACGCCCGGCGGCATATTCGCCTCATGGAAAACCAATCTTTCTCTGCCGGGGCAATGCC CGTGGCTCTGGACCGCTGCGAAGGCTATGACCGCCAGTCGCTTGACCGCCTGACAGGCGATGTGCTGGATGCCGCGCGTA TAGCACAGTTTCATTCCCTCAAACCGGGAACCAGGGTGCTCGTGAAGCCCAACCTGCTTATGGGCAAGCCGCTGGCCTGT ACCTCACCCGGGGTTGTGGCCGCGGCCTGCCGCTGGCTGCGTGACCACGGGGCACAGATGGCCGTAGCCGATTCGCCGGG TTTCGGGCGTGCCGTGGCCGTGGCCCGCGCCATTGGCCTTGAAAGTTCCCTGCGGCCTCTGGGACTTGCCGTGCGCGAAC TGGACAGGCCTGTGCCTGTGCGGCTGGATACGGATCTGCCGGCAGGCCTGCAGGGCGGCAGGGGCGGTCGCAAAAGGCCG TCTTTTCAGGTATCAAGTGCTGTGCAGGAATGCGATTTCATCCTTTCCCTGCCAAGGGTCAAGGCGCACGGGCAGATGCT GCTCACCCTGGCGGTGAAAAACTGTTTCGGCTGCGTAAGCGGCCTGCACAAGGCCGTGGCCCATGCCCGCGAGGGGCGCG ACCCTGTATATTTTGCCGACTGTCTGGCCGCGCTTTGGGCCGCCCTGCCGCCGGTGGCCGCCCTGGCTGATGGCGGCGTG GCCATGCACAGGACGGGACCGTCCAAGGGGGAAGCCTTTGTGCTGAAACTGATGGGAGCCAGCCCCTCGGCCGTGGCGCT GGATGAGGCGCTGTATGCGGTTTTTGGCCTTGGCCCGCAGGATGTCCCTCTGGGCGCGGCGCTTGCGCGGCGCAAGGCTC CGGGCAGCGCGGCGGCGGGTACTGAAATGGCCTTTCCGCTTTTGCGCCCCGAAGATTTCGACGCCCGCGGTTTTGAGCTG CCGCAGCGTCTGTCCCACACGTCTTTTCATCCCGCGCGTTTTGTACAGAGTTGCCTGCGCCGCGCCATCGCGGCCATAAA AAAATAA
Upstream 100 bases:
>100_bases GGTAACCCCGGTTGGCAAGGTCCACTACGCCCTTCTGAATGCATACGCCAAGAGCTGGCGTTTGAAAAGGGCAGGCCCCG GGCAAGGCGGGCAAAACTCC
Downstream 100 bases:
>100_bases GGAAGCAGCAAATGCCAAGAATTCTTCCCGGTGAAACAGATATTTATGCCATTACTGATTCCCGCCTGTCGCTGGGGCGC TCCCTTGAAGAGGTGGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MPGLDKADARRHIRLMENQSFSAGAMPVALDRCEGYDRQSLDRLTGDVLDAARIAQFHSLKPGTRVLVKPNLLMGKPLAC TSPGVVAAACRWLRDHGAQMAVADSPGFGRAVAVARAIGLESSLRPLGLAVRELDRPVPVRLDTDLPAGLQGGRGGRKRP SFQVSSAVQECDFILSLPRVKAHGQMLLTLAVKNCFGCVSGLHKAVAHAREGRDPVYFADCLAALWAALPPVAALADGGV AMHRTGPSKGEAFVLKLMGASPSAVALDEALYAVFGLGPQDVPLGAALARRKAPGSAAAGTEMAFPLLRPEDFDARGFEL PQRLSHTSFHPARFVQSCLRRAIAAIKK
Sequences:
>Translated_348_residues MPGLDKADARRHIRLMENQSFSAGAMPVALDRCEGYDRQSLDRLTGDVLDAARIAQFHSLKPGTRVLVKPNLLMGKPLAC TSPGVVAAACRWLRDHGAQMAVADSPGFGRAVAVARAIGLESSLRPLGLAVRELDRPVPVRLDTDLPAGLQGGRGGRKRP SFQVSSAVQECDFILSLPRVKAHGQMLLTLAVKNCFGCVSGLHKAVAHAREGRDPVYFADCLAALWAALPPVAALADGGV AMHRTGPSKGEAFVLKLMGASPSAVALDEALYAVFGLGPQDVPLGAALARRKAPGSAAAGTEMAFPLLRPEDFDARGFEL PQRLSHTSFHPARFVQSCLRRAIAAIKK >Mature_347_residues PGLDKADARRHIRLMENQSFSAGAMPVALDRCEGYDRQSLDRLTGDVLDAARIAQFHSLKPGTRVLVKPNLLMGKPLACT SPGVVAAACRWLRDHGAQMAVADSPGFGRAVAVARAIGLESSLRPLGLAVRELDRPVPVRLDTDLPAGLQGGRGGRKRPS FQVSSAVQECDFILSLPRVKAHGQMLLTLAVKNCFGCVSGLHKAVAHAREGRDPVYFADCLAALWAALPPVAALADGGVA MHRTGPSKGEAFVLKLMGASPSAVALDEALYAVFGLGPQDVPLGAALARRKAPGSAAAGTEMAFPLLRPEDFDARGFELP QRLSHTSFHPARFVQSCLRRAIAAIKK
Specific function: Unknown
COG id: COG2006
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007160 [H]
Pfam domain/function: PF04015 DUF362 [H]
EC number: NA
Molecular weight: Translated: 36885; Mature: 36754
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGLDKADARRHIRLMENQSFSAGAMPVALDRCEGYDRQSLDRLTGDVLDAARIAQFHSL CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC KPGTRVLVKPNLLMGKPLACTSPGVVAAACRWLRDHGAQMAVADSPGFGRAVAVARAIGL CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCC ESSLRPLGLAVRELDRPVPVRLDTDLPAGLQGGRGGRKRPSFQVSSAVQECDFILSLPRV CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH KAHGQMLLTLAVKNCFGCVSGLHKAVAHAREGRDPVYFADCLAALWAALPPVAALADGGV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCE AMHRTGPSKGEAFVLKLMGASPSAVALDEALYAVFGLGPQDVPLGAALARRKAPGSAAAG EEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC TEMAFPLLRPEDFDARGFELPQRLSHTSFHPARFVQSCLRRAIAAIKK CHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PGLDKADARRHIRLMENQSFSAGAMPVALDRCEGYDRQSLDRLTGDVLDAARIAQFHSL CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC KPGTRVLVKPNLLMGKPLACTSPGVVAAACRWLRDHGAQMAVADSPGFGRAVAVARAIGL CCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCC ESSLRPLGLAVRELDRPVPVRLDTDLPAGLQGGRGGRKRPSFQVSSAVQECDFILSLPRV CCCCCHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH KAHGQMLLTLAVKNCFGCVSGLHKAVAHAREGRDPVYFADCLAALWAALPPVAALADGGV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCCCE AMHRTGPSKGEAFVLKLMGASPSAVALDEALYAVFGLGPQDVPLGAALARRKAPGSAAAG EEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCC TEMAFPLLRPEDFDARGFELPQRLSHTSFHPARFVQSCLRRAIAAIKK CHHCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]