| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is thiE [H]
Identifier: 220903491
GI number: 220903491
Start: 260281
End: 260916
Strand: Direct
Name: thiE [H]
Synonym: Ddes_0209
Alternate gene names: 220903491
Gene position: 260281-260916 (Clockwise)
Preceding gene: 220903490
Following gene: 220903493
Centisome position: 9.06
GC content: 60.69
Gene sequence:
>636_bases ATGCCAAGAATTCTTCCCGGTGAAACAGATATTTATGCCATTACTGATTCCCGCCTGTCGCTGGGGCGCTCCCTTGAAGA GGTGGCTTCAGCCCTGCTGGGGGCGGGCGTGCGTCTTTTGCAGTACCGCGAAAAAAATTTCAAAGGCGGTGAAATGCTTG AAGAATGCCGCCTGCTGCGCCGCCTGACCCGTGAGGCGGGGGCCTGCTTTATTGTTAACGATCATGTGGATATTGCCATG CTTGTGGATGCTGACGGCGTGCATGTGGGGCAGGAGGACCTGCCTGTGCCTGAAGTGCGCAGGCTTGTGGGACCGGACAT GATCATCGGCCTTTCCACCCACGAGCCGGATCAGGCGCTGGCCGCGCGGGCGCTGGGGGCGGACTATCTGGGTGTTGGCC CCATTTTCGCCACGCAGACCAAGGAAGATGTGGTGGCCCCCGTGGGTTTTGGTTATCTGGATTGGGTTGCCGCCAACATT GATATGCCTTTTGTAGCCATAGGCGGCATCAAGGCCCACAATATCGCTGAAGTGGCCCGCCACGGCGCGCGCTGTTGCAG CCTGGTTTCCGAACTGGTGGGCGCGCCGGACATTGCCGCGCGTGTGGATGCCGTGCGGCGGGCCATGCGCGGCTAG
Upstream 100 bases:
>100_bases TGCCGCAGCGTCTGTCCCACACGTCTTTTCATCCCGCGCGTTTTGTACAGAGTTGCCTGCGCCGCGCCATCGCGGCCATA AAAAAATAAGGAAGCAGCAA
Downstream 100 bases:
>100_bases AGCGTTTTGAGTTCTTGCTGCTCTGACGGCGGCGCAGGCGCTTGCTGCTGCGGCATAAAAGCATGCTTGCCCGCCCGGTC CCGGTTCACTGGGCGGGCCG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MPRILPGETDIYAITDSRLSLGRSLEEVASALLGAGVRLLQYREKNFKGGEMLEECRLLRRLTREAGACFIVNDHVDIAM LVDADGVHVGQEDLPVPEVRRLVGPDMIIGLSTHEPDQALAARALGADYLGVGPIFATQTKEDVVAPVGFGYLDWVAANI DMPFVAIGGIKAHNIAEVARHGARCCSLVSELVGAPDIAARVDAVRRAMRG
Sequences:
>Translated_211_residues MPRILPGETDIYAITDSRLSLGRSLEEVASALLGAGVRLLQYREKNFKGGEMLEECRLLRRLTREAGACFIVNDHVDIAM LVDADGVHVGQEDLPVPEVRRLVGPDMIIGLSTHEPDQALAARALGADYLGVGPIFATQTKEDVVAPVGFGYLDWVAANI DMPFVAIGGIKAHNIAEVARHGARCCSLVSELVGAPDIAARVDAVRRAMRG >Mature_210_residues PRILPGETDIYAITDSRLSLGRSLEEVASALLGAGVRLLQYREKNFKGGEMLEECRLLRRLTREAGACFIVNDHVDIAML VDADGVHVGQEDLPVPEVRRLVGPDMIIGLSTHEPDQALAARALGADYLGVGPIFATQTKEDVVAPVGFGYLDWVAANID MPFVAIGGIKAHNIAEVARHGARCCSLVSELVGAPDIAARVDAVRRAMRG
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=197, Percent_Identity=34.5177664974619, Blast_Score=81, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6325042, Length=221, Percent_Identity=35.2941176470588, Blast_Score=114, Evalue=8e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 22652; Mature: 22521
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILPGETDIYAITDSRLSLGRSLEEVASALLGAGVRLLQYREKNFKGGEMLEECRLLR CCCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RLTREAGACFIVNDHVDIAMLVDADGVHVGQEDLPVPEVRRLVGPDMIIGLSTHEPDQAL HHHHHCCEEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHCCCCEEEECCCCCCHHHH AARALGADYLGVGPIFATQTKEDVVAPVGFGYLDWVAANIDMPFVAIGGIKAHNIAEVAR HHHHHCCCCCCCCCEEECCCHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHH HGARCCSLVSELVGAPDIAARVDAVRRAMRG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC >Mature Secondary Structure PRILPGETDIYAITDSRLSLGRSLEEVASALLGAGVRLLQYREKNFKGGEMLEECRLLR CCCCCCCCCEEEEECCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH RLTREAGACFIVNDHVDIAMLVDADGVHVGQEDLPVPEVRRLVGPDMIIGLSTHEPDQAL HHHHHCCEEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHCCCCEEEECCCCCCHHHH AARALGADYLGVGPIFATQTKEDVVAPVGFGYLDWVAANIDMPFVAIGGIKAHNIAEVAR HHHHHCCCCCCCCCEEECCCHHHHCCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHH HGARCCSLVSELVGAPDIAARVDAVRRAMRG HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA