| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 chromosome, complete genome. |
|---|---|
| Accession | NC_011883 |
| Length | 2,873,437 |
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The map label for this gene is zraS [H]
Identifier: 220903470
GI number: 220903470
Start: 234547
End: 236112
Strand: Direct
Name: zraS [H]
Synonym: Ddes_0186
Alternate gene names: 220903470
Gene position: 234547-236112 (Clockwise)
Preceding gene: 220903468
Following gene: 220903471
Centisome position: 8.16
GC content: 60.47
Gene sequence:
>1566_bases ATGGCCTCCGCCCGGTGCATGATGACACTGCGCGCGCATGACGCTATAAGCACAGGCATGACCTCGGCACACAACAACCC GGACGGCGAAAGCCGGAAAGAGCCGCCCCAGGGTTGGGGAGGACTTGAGCTTTACGCATCCATGAAGGGGATGCGGGGCG TTTCACGTACGCCCCTCGGCTTGCTTATGGGCGGCGCGGCCCTTGTGCTGGCTCTCATGATCAGCCTGCTGGCCTATATA TCCATCGAGCGCAGCGAGGCTGCCATGGCCCGATTGCTCGCGGAAAAAGGCTCTTCCCTCATTATTGCCTTTGAAAGCAT TTTGCGCTCCGGCATGCGCAGCGAGGCGGGCGTGCGCCTGCAGGTGCTGCTGGAAGAAATGGCGGCAAGCCCAGGCATTG TTTTTGTTTCCGTAACCATGCCTGACGGCATTATTGTGGCGCACAGCAACCGTGTGCGCCTTGGAGAAATACTGAAAGTT GAAGACAGGGAGATGGACGAGACCCGTATGCGTGACCTGAACCCGGGCATGCTGGCCCAATGGGGCATCATGCAAATGGA GGGGCAGCGCGTTTTTGTGGTGTACCGCCAGTTTTCCCCCGGCATGGCCGACATGCCCAGAGGCTATCCTGTGCCGATCA TTTTTCTCGGGCTGGAGATTTCGCCTTTTGAAATCACGCGCAGCCAGAACCGGGACTATGTGGCCATGCTTTCGTCCGTG ACCCTTCTGGTGGGTCTGGCCTGTCTGTTGGCGCTGTATTATGCCGAACGGGCGCGCGAATCGCGCCAGCAGCAACGCAA GGCCGAAGTCGAGGTGCGCCGTCTTGAAGCCGAGGTGCGCCGCAAGGAAAAGCTGGCTGCTGTGGGCAATCTGGCCGCCG GGGTGGCTCACGAGATCCGCAATCCCTTGAGTTCCATTAAGGGTTATGCCACCTATTTCGGCCAGCGCTTTCCTGAGGGC AGCGAAGACCGCGCTGCGGCCAATGTGATGGTTAGCGAGGTCGACAGGCTCAACCGCGTCATTATGGATCTTATCGGCCT TTCACGGCCGAGCGATGTCTGCCCCCGGCCCGGGCGTCTTGCCGATGTGGTGGAACACGTTATGCGCCTTATCCGGCAGG ATGCAGAAAAGCGCGGTGTTGAGGTGGAATGCCGGGTGGCCCCGGGCGTACCGCTGGCTATGGTCGATCCGGAACGTATG GGGCAGGCCCTGCTGAATCTTTGCCTCAACGCGCTGGACGCCATGCCGGAGGGCGGACGGCTCACCTTTGCCGTGACGTG GCATAAAAAAGGCGTATGTCTTATGGTGCGGGATACGGGCGTGGGGATTGTTCCCCGGCAGTTGCCGCATGTCTTTGACC CCTACTTCACGACCAAGGGGCAAGGAACCGGTCTTGGGCTGGCCATGGTCCACAAGATCGTGGAGGCGCATAACGGCGAG ATCAGCGTTACTTCCCGTCAGGCGCAGTCCGGCGCGGCGGGCGAAACCATCTTTCGAATCTGGCTGCCGGAGGCGCCTCC GGCAACACCGCCTTTTGTGGAACGCAGAAAGAGAAAGCGTCTGTGA
Upstream 100 bases:
>100_bases CGTCAGACGCCGTATATTCAGGCCGGAAACGGCAGAAGCGTTGCCGTGACAACGCACGTTCTGCATCTTATGCATTTGCA AAAATCATGCAACTTTTTTT
Downstream 100 bases:
>100_bases TTCACCGGGCTGCGCGCGGCAAATGGCTGCGACCCGGCTGGTCAGGAGGATTATCAGGGTGAAGAACAGCATTCTTGTAG TGGACGATGACGACGCGCAC
Product: sensor protein ZraS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MASARCMMTLRAHDAISTGMTSAHNNPDGESRKEPPQGWGGLELYASMKGMRGVSRTPLGLLMGGAALVLALMISLLAYI SIERSEAAMARLLAEKGSSLIIAFESILRSGMRSEAGVRLQVLLEEMAASPGIVFVSVTMPDGIIVAHSNRVRLGEILKV EDREMDETRMRDLNPGMLAQWGIMQMEGQRVFVVYRQFSPGMADMPRGYPVPIIFLGLEISPFEITRSQNRDYVAMLSSV TLLVGLACLLALYYAERARESRQQQRKAEVEVRRLEAEVRRKEKLAAVGNLAAGVAHEIRNPLSSIKGYATYFGQRFPEG SEDRAAANVMVSEVDRLNRVIMDLIGLSRPSDVCPRPGRLADVVEHVMRLIRQDAEKRGVEVECRVAPGVPLAMVDPERM GQALLNLCLNALDAMPEGGRLTFAVTWHKKGVCLMVRDTGVGIVPRQLPHVFDPYFTTKGQGTGLGLAMVHKIVEAHNGE ISVTSRQAQSGAAGETIFRIWLPEAPPATPPFVERRKRKRL
Sequences:
>Translated_521_residues MASARCMMTLRAHDAISTGMTSAHNNPDGESRKEPPQGWGGLELYASMKGMRGVSRTPLGLLMGGAALVLALMISLLAYI SIERSEAAMARLLAEKGSSLIIAFESILRSGMRSEAGVRLQVLLEEMAASPGIVFVSVTMPDGIIVAHSNRVRLGEILKV EDREMDETRMRDLNPGMLAQWGIMQMEGQRVFVVYRQFSPGMADMPRGYPVPIIFLGLEISPFEITRSQNRDYVAMLSSV TLLVGLACLLALYYAERARESRQQQRKAEVEVRRLEAEVRRKEKLAAVGNLAAGVAHEIRNPLSSIKGYATYFGQRFPEG SEDRAAANVMVSEVDRLNRVIMDLIGLSRPSDVCPRPGRLADVVEHVMRLIRQDAEKRGVEVECRVAPGVPLAMVDPERM GQALLNLCLNALDAMPEGGRLTFAVTWHKKGVCLMVRDTGVGIVPRQLPHVFDPYFTTKGQGTGLGLAMVHKIVEAHNGE ISVTSRQAQSGAAGETIFRIWLPEAPPATPPFVERRKRKRL >Mature_520_residues ASARCMMTLRAHDAISTGMTSAHNNPDGESRKEPPQGWGGLELYASMKGMRGVSRTPLGLLMGGAALVLALMISLLAYIS IERSEAAMARLLAEKGSSLIIAFESILRSGMRSEAGVRLQVLLEEMAASPGIVFVSVTMPDGIIVAHSNRVRLGEILKVE DREMDETRMRDLNPGMLAQWGIMQMEGQRVFVVYRQFSPGMADMPRGYPVPIIFLGLEISPFEITRSQNRDYVAMLSSVT LLVGLACLLALYYAERARESRQQQRKAEVEVRRLEAEVRRKEKLAAVGNLAAGVAHEIRNPLSSIKGYATYFGQRFPEGS EDRAAANVMVSEVDRLNRVIMDLIGLSRPSDVCPRPGRLADVVEHVMRLIRQDAEKRGVEVECRVAPGVPLAMVDPERMG QALLNLCLNALDAMPEGGRLTFAVTWHKKGVCLMVRDTGVGIVPRQLPHVFDPYFTTKGQGTGLGLAMVHKIVEAHNGEI SVTSRQAQSGAAGETIFRIWLPEAPPATPPFVERRKRKRL
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=481, Percent_Identity=37.006237006237, Blast_Score=273, Evalue=2e-74, Organism=Escherichia coli, GI1788549, Length=207, Percent_Identity=34.2995169082126, Blast_Score=122, Evalue=4e-29, Organism=Escherichia coli, GI1790300, Length=242, Percent_Identity=30.9917355371901, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1786783, Length=335, Percent_Identity=28.0597014925373, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI145693157, Length=210, Percent_Identity=30, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081816, Length=238, Percent_Identity=28.1512605042017, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1786600, Length=210, Percent_Identity=25.2380952380952, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1789149, Length=268, Percent_Identity=24.6268656716418, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1790861, Length=213, Percent_Identity=29.5774647887324, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1790346, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789808, Length=217, Percent_Identity=26.7281105990783, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788393, Length=202, Percent_Identity=27.7227722772277, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI48994928, Length=220, Percent_Identity=25, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 57309; Mature: 57178
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASARCMMTLRAHDAISTGMTSAHNNPDGESRKEPPQGWGGLELYASMKGMRGVSRTPLG CCCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH LLMGGAALVLALMISLLAYISIERSEAAMARLLAEKGSSLIIAFESILRSGMRSEAGVRL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHH QVLLEEMAASPGIVFVSVTMPDGIIVAHSNRVRLGEILKVEDREMDETRMRDLNPGMLAQ HHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEHHHHEECCCCCCHHHHHHCCCCCHHHH WGIMQMEGQRVFVVYRQFSPGMADMPRGYPVPIIFLGLEISPFEITRSQNRDYVAMLSSV CCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECEECCEEEECCCCCCHHHHHHHH TLLVGLACLLALYYAERARESRQQQRKAEVEVRRLEAEVRRKEKLAAVGNLAAGVAHEIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NPLSSIKGYATYFGQRFPEGSEDRAAANVMVSEVDRLNRVIMDLIGLSRPSDVCPRPGRL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH ADVVEHVMRLIRQDAEKRGVEVECRVAPGVPLAMVDPERMGQALLNLCLNALDAMPEGGR HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCE LTFAVTWHKKGVCLMVRDTGVGIVPRQLPHVFDPYFTTKGQGTGLGLAMVHKIVEAHNGE EEEEEEEECCCEEEEEECCCCCCCCHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCE ISVTSRQAQSGAAGETIFRIWLPEAPPATPPFVERRKRKRL EEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCC >Mature Secondary Structure ASARCMMTLRAHDAISTGMTSAHNNPDGESRKEPPQGWGGLELYASMKGMRGVSRTPLG CCCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHH LLMGGAALVLALMISLLAYISIERSEAAMARLLAEKGSSLIIAFESILRSGMRSEAGVRL HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCEEEEHHHHHHCCCCCCCCCHH QVLLEEMAASPGIVFVSVTMPDGIIVAHSNRVRLGEILKVEDREMDETRMRDLNPGMLAQ HHHHHHHCCCCCEEEEEEECCCCEEEECCCCEEHHHHEECCCCCCHHHHHHCCCCCHHHH WGIMQMEGQRVFVVYRQFSPGMADMPRGYPVPIIFLGLEISPFEITRSQNRDYVAMLSSV CCCEEECCCEEEEEEEECCCCCCCCCCCCCCEEEEEECEECCEEEECCCCCCHHHHHHHH TLLVGLACLLALYYAERARESRQQQRKAEVEVRRLEAEVRRKEKLAAVGNLAAGVAHEIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NPLSSIKGYATYFGQRFPEGSEDRAAANVMVSEVDRLNRVIMDLIGLSRPSDVCPRPGRL HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHH ADVVEHVMRLIRQDAEKRGVEVECRVAPGVPLAMVDPERMGQALLNLCLNALDAMPEGGR HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCE LTFAVTWHKKGVCLMVRDTGVGIVPRQLPHVFDPYFTTKGQGTGLGLAMVHKIVEAHNGE EEEEEEEECCCEEEEEECCCCCCCCHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCE ISVTSRQAQSGAAGETIFRIWLPEAPPATPPFVERRKRKRL EEEECCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]