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The map label for this gene is yhcC [C]

Identifier: 220903466

GI number: 220903466

Start: 228936

End: 230141

Strand: Direct

Name: yhcC [C]

Synonym: Ddes_0182

Alternate gene names: 220903466

Gene position: 228936-230141 (Clockwise)

Preceding gene: 220903461

Following gene: 220903467

Centisome position: 7.97

GC content: 66.5

Gene sequence:

>1206_bases
ATGAAAACGGTATCTGCCCGAATTTTTTCTTTAACCCTGCCCTGGGTTCTGCCTGCGGCGCAGGCTTGTGCGCTCGTGCC
GGTATTTCTTCCTTTCAGGGGTTGCCCGGTGCGTTGCGTCTTTTGTGCGCAGGATGTGCAGACAGGTTCCGTCTCTGCGG
CGTGCCCGGCAGAGGCAGTGTCCGGCACTGCTTTTGCGCCGCGGACGGGCACGGCCCCGGCCGCTGCTGCGGGGCGCGCC
TCCCTGCCGTCGCCCCTGCCTCCGCTTCCGGTCCAGCCGCTTGATGTCCTGCTGCATGAGACGCGGGGCAATCTTGAGCG
CCGCCATACCCTCGGCCTGCCCCCCGCGGAACTGGCTTTTTACGGTGGTACATTTACTGCCATGCCTGATGGCGATCAGG
CTGCCTGCCTTGATCTGGCGGGCCTGGCGCTTGAGCGGGGCTGGATACGTTCCTTCCGCTGCTCCACCCGGCCGGATTGC
GTGACCGCGCCGGTACTTGAACGCCTGCGCGCGGCGGGTTGCCGTTGTGTGGAGCTGGGGGTGCAGAGTTTTTCCGATGC
GGCGCTGGCCGCATCGTCGCGTGGGTATGACGGAGCTACGGCCCTGCGCGCCTGTGCCCATGTGAAGGATGCGGGGCTGG
CGCTGGGGGTTCAGCTTTTGCCGGGCATGCCGGGGCATGCCCCTGCCGATTTTCTGGCTGACGTGCCACAGGCCCTGCGC
GCCGGAGCGGACATGCTGCGCTTCTACCCCTGTCTGGTGCTCGAAGGTACGGCCCTTGCTCGTATGTGGCGGCAGGGGAC
ATACAGCCCGTGGCCGCTTGAGGCGACGCTGGACCTGCTGGCGCAGGGCTGGCTGATGGCTCAGGCTGCCCATGTGCCTG
TGATACGTATGGGACTCGCCCCTGAAGCCGCTCTGGACGGAGCTGTGCTGGCCGGGCCTGTTGACCGGTCTTTGGGCAGC
CGCGTTATGGGGCGCGCCCTGCTGCTCGCCGTACGCCGTGCCGTGGAAGCGGCGGGTGAAACTTCCGGGGCGTCCTGCGT
TCCCGTTCTTTCGGAGCTGCGTCTGCCGGGAGCCTGCCAGGGATACATCTGGGGAACGCGGGGCGAGTTGCGCCCTGCCT
GGGCCGGCCTGGGGCTTGAGCCGAAAAATGCGCGTTTTGATGCCGTCTGCGGGCAGACCCTCTTTTTGACCCTCACCTGT
TCCTGA

Upstream 100 bases:

>100_bases
CAACTAACGGGCAGAGCAAGATTTTTCTTAAAAATTGCCTTCTTGCCGAAAGAATGGCCGTAGTGCGCGCCGCGTATGGC
TTCACAGGCATCGAGTATAT

Downstream 100 bases:

>100_bases
TTACAAGTTGCTCCGGGCGGTTCCGGCCCTTTCGGCTTCCGGCCAGATACGGCCGGCGCCTCTTTTTTGCATTTCTATGC
CGGTTCTCTTGCTGCCCCTT

Product: Radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MKTVSARIFSLTLPWVLPAAQACALVPVFLPFRGCPVRCVFCAQDVQTGSVSAACPAEAVSGTAFAPRTGTAPAAAAGRA
SLPSPLPPLPVQPLDVLLHETRGNLERRHTLGLPPAELAFYGGTFTAMPDGDQAACLDLAGLALERGWIRSFRCSTRPDC
VTAPVLERLRAAGCRCVELGVQSFSDAALAASSRGYDGATALRACAHVKDAGLALGVQLLPGMPGHAPADFLADVPQALR
AGADMLRFYPCLVLEGTALARMWRQGTYSPWPLEATLDLLAQGWLMAQAAHVPVIRMGLAPEAALDGAVLAGPVDRSLGS
RVMGRALLLAVRRAVEAAGETSGASCVPVLSELRLPGACQGYIWGTRGELRPAWAGLGLEPKNARFDAVCGQTLFLTLTC
S

Sequences:

>Translated_401_residues
MKTVSARIFSLTLPWVLPAAQACALVPVFLPFRGCPVRCVFCAQDVQTGSVSAACPAEAVSGTAFAPRTGTAPAAAAGRA
SLPSPLPPLPVQPLDVLLHETRGNLERRHTLGLPPAELAFYGGTFTAMPDGDQAACLDLAGLALERGWIRSFRCSTRPDC
VTAPVLERLRAAGCRCVELGVQSFSDAALAASSRGYDGATALRACAHVKDAGLALGVQLLPGMPGHAPADFLADVPQALR
AGADMLRFYPCLVLEGTALARMWRQGTYSPWPLEATLDLLAQGWLMAQAAHVPVIRMGLAPEAALDGAVLAGPVDRSLGS
RVMGRALLLAVRRAVEAAGETSGASCVPVLSELRLPGACQGYIWGTRGELRPAWAGLGLEPKNARFDAVCGQTLFLTLTC
S
>Mature_401_residues
MKTVSARIFSLTLPWVLPAAQACALVPVFLPFRGCPVRCVFCAQDVQTGSVSAACPAEAVSGTAFAPRTGTAPAAAAGRA
SLPSPLPPLPVQPLDVLLHETRGNLERRHTLGLPPAELAFYGGTFTAMPDGDQAACLDLAGLALERGWIRSFRCSTRPDC
VTAPVLERLRAAGCRCVELGVQSFSDAALAASSRGYDGATALRACAHVKDAGLALGVQLLPGMPGHAPADFLADVPQALR
AGADMLRFYPCLVLEGTALARMWRQGTYSPWPLEATLDLLAQGWLMAQAAHVPVIRMGLAPEAALDGAVLAGPVDRSLGS
RVMGRALLLAVRRAVEAAGETSGASCVPVLSELRLPGACQGYIWGTRGELRPAWAGLGLEPKNARFDAVCGQTLFLTLTC
S

Specific function: Unknown

COG id: COG1243

COG function: function code KB; Histone acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Escherichia coli, GI2367204, Length=123, Percent_Identity=30.8943089430894, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI133955098, Length=259, Percent_Identity=25.0965250965251, Blast_Score=78, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6325171, Length=269, Percent_Identity=24.5353159851301, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI19920684, Length=266, Percent_Identity=24.4360902255639, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181
- InterPro:   IPR006638
- InterPro:   IPR005910
- InterPro:   IPR007197 [H]

Pfam domain/function: PF00583 Acetyltransf_1; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 41886; Mature: 41886

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTVSARIFSLTLPWVLPAAQACALVPVFLPFRGCPVRCVFCAQDVQTGSVSAACPAEAV
CCCHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHH
SGTAFAPRTGTAPAAAAGRASLPSPLPPLPVQPLDVLLHETRGNLERRHTLGLPPAELAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHEE
YGGTFTAMPDGDQAACLDLAGLALERGWIRSFRCSTRPDCVTAPVLERLRAAGCRCVELG
ECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEHH
VQSFSDAALAASSRGYDGATALRACAHVKDAGLALGVQLLPGMPGHAPADFLADVPQALR
HHHHCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AGADMLRFYPCLVLEGTALARMWRQGTYSPWPLEATLDLLAQGWLMAQAAHVPVIRMGLA
HHHHHHHHHHHHEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC
PEAALDGAVLAGPVDRSLGSRVMGRALLLAVRRAVEAAGETSGASCVPVLSELRLPGACQ
CHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC
GYIWGTRGELRPAWAGLGLEPKNARFDAVCGQTLFLTLTCS
CEEECCCCCCCHHHHCCCCCCCCCCHHHCCCCEEEEEEEEC
>Mature Secondary Structure
MKTVSARIFSLTLPWVLPAAQACALVPVFLPFRGCPVRCVFCAQDVQTGSVSAACPAEAV
CCCHHEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCHHHH
SGTAFAPRTGTAPAAAAGRASLPSPLPPLPVQPLDVLLHETRGNLERRHTLGLPPAELAF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHHHEE
YGGTFTAMPDGDQAACLDLAGLALERGWIRSFRCSTRPDCVTAPVLERLRAAGCRCVELG
ECCEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCEEEEHH
VQSFSDAALAASSRGYDGATALRACAHVKDAGLALGVQLLPGMPGHAPADFLADVPQALR
HHHHCHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHH
AGADMLRFYPCLVLEGTALARMWRQGTYSPWPLEATLDLLAQGWLMAQAAHVPVIRMGLA
HHHHHHHHHHHHEECCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC
PEAALDGAVLAGPVDRSLGSRVMGRALLLAVRRAVEAAGETSGASCVPVLSELRLPGACQ
CHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCC
GYIWGTRGELRPAWAGLGLEPKNARFDAVCGQTLFLTLTCS
CEEECCCCCCCHHHHCCCCCCCCCCHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]