Click here to switch to the map view.

The map label for this gene is dcrA [H]

Identifier: 220903467

GI number: 220903467

Start: 230563

End: 232653

Strand: Direct

Name: dcrA [H]

Synonym: Ddes_0183

Alternate gene names: 220903467

Gene position: 230563-232653 (Clockwise)

Preceding gene: 220903466

Following gene: 220903468

Centisome position: 8.02

GC content: 56.72

Gene sequence:

>2091_bases
ATGAAAATGGGAATCATGAGCAAAATGATGCTCAACATTTTGGTTCCGTCCATGCTGGGGCTGACCGCGGTTTGCGTTTT
CAGCTATTGGCGGGCGGAGACATCACTGACACAGCAGATAGCGCATGAGCTGAATACGGTTATCGACAAGCAGGTGCATG
GCCTTGCCACTGTGCAGCAAATGACGCGCGGTCTCATGAAGACCAGCGCCGAGTCCAATCACGTTAAAAATGCCTTGCTC
CGCCGCGGTTCTTCACAGTCCGTTCTTGAGGTTGTCTACGACGGCGAGCCGGCATCTTATGGATCAGAAGACGTGCAGAA
CGTCCTTGATGACCTTACGGAGCACTTCGGCATAGTGGATGGAGCCGGCCTGCTTGACCTTGACGGCAGGGTCATCGCCC
ACACCAGCCGGGATCTTGTTGGGCGGGGTATGGGTGATCGCAGGTCTGTGAACGTGGCCCTTCAGGGCAGCATGGGCATC
GAGAACCTGCCCAACCATACAGGAGAACTCGCCACCATAGTTACGACTCCGGTCATGAAGGACGGCAAAACCCAAGGTGT
GCTCTATGCCTATATGAGCCTGCCCCGCCTGAGCGCCGGGACCACGGATACCATAAAGATCGGAAAAGACGGTTTTTGCG
CGGTTTATGACAGCGAGGGCAGGGTGCTCATGCACCCCGACAAGAGCCTGATCGGCACTGACGGCAGCAATCAGCCTCAT
GTCAGGGCAGCTCTGGGCAACGGCAACGGCCGGGTGGTTTACGATCATAACGATACCGAAATGGTGGCCTATTATCGGCA
CATGCCGGAAAGCAACTGGCACGTGGTGCTGGTGGGCGACAGAGACGAACTGCTGGAACCTGCCAGAAATCTTCTGAAAG
AAAATATGCTTATGGGCGGTGTCGCTATTCTCGTGGTCGGCTGCATCATCATCGTTGTGGCCCGGGGTATTGCGCGTTCC
ATCAAGGCCGGTGAAAACTATGTGCAGGCCGTTGCCGGGGGGAACTTCAATCCTTCACCGCAGGAAGAAACGGAGCTGGC
ACAGGCAGCCAGGCGCGGTGATGAGATAGGCGGTCTTTCGCAGGGCATTCAGGGAATGGTAGGCAAGTTGCGCAGCCTGT
TCAGCGAAAGCGAGGAAAAGAATCACCAGGCTGAGATTGCCAAAACAGAAGCCGAAGAAGCCATGGGAGAAGCCCAGGAG
GCGCGTAAACAGGCGGAAAACGCCCGGCAGGAGGGCATGCTGGCCGCTGCCGGACAGCTGGAAGCCGTGGCGGGGATTAT
TTCTTCTGCGTCTACACAGCTTTCTGCCCAGATTGAACAGTCCGACCGCAGTGCCGCCGAATCATCCCAGCGTCTTTCCG
AGGCGGCTACGGCCATGAACCAGATGAATGCCACAGTTCAGGAAGTGGCGCATAATGCGGCTGCTGCTTCGTCGGCATCA
AGAGAAACCAAGGAAAAGGCCCATGCCGGCGCCCAGATTGTAGAACAGGCCGTACGCAGTATAGAGGCGGTACGGCATGT
GTCGGAAGAGCTGAAAAGCGATATGGCCGAGCTTGGCGATCATGCTCAGAGCATTACGCGCATCATGAATGTCATTTCAG
ATATCGCAGACCAGACCAATCTGCTGGCGCTCAACGCGGCCATTGAAGCCGCCCGCGCCGGTGATGCCGGAAGGGGTTTT
GCGGTGGTGGCCGACGAAGTACGCAAGCTGGCTGAAAAAACTATGGCTTCCACCCATGATGTCAGTGCGGCTATCCAGGC
CATACAGAACAGTACGGCAAAAAGTATGAGTTCGGCAGACAATGCCGTAAACCAGATCGCGCAGGCCACAAATTACGCCA
GCGAGTCTGGCCAGGCCTTGCGGGAAATCGTGGCTACTGTGGAAGGCACGTCGGATCAGGTCAATGCTATAGCCACCGCC
AGTGAAGAGCAGTCAGCCGCCAGTGATGAAATCAATCAGAGCATTGTGCAGGTGAACGAGATGTCGCGGCAAAGTGCTGT
GGCTATGGCCGAGGCCACGCAGGCTGTGGCCGAACTGGCGGCTCAGGCGCACACGCTCAAGAATCTCATCGCACAGATGA
AGCTCGGTTAG

Upstream 100 bases:

>100_bases
TCTTCCTGTCCACTCCTCTGCCACTGACCTCTCACAGGCCTGAACAGGCTGTGTTTTTGGCTGTTAATCCACAAGACTTA
CGAGTTCAAAGGGGCTGTAT

Downstream 100 bases:

>100_bases
CGCCCGGGCATGGCCCGGTACGCCGTTGGGCAGGGCATTGCAAGAGCATAGCTAAAAGCCCCCGCGTTCAGGCGCGGGGG
CTTTTTTTGCCATAAAAAAC

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 696; Mature: 696

Protein sequence:

>696_residues
MKMGIMSKMMLNILVPSMLGLTAVCVFSYWRAETSLTQQIAHELNTVIDKQVHGLATVQQMTRGLMKTSAESNHVKNALL
RRGSSQSVLEVVYDGEPASYGSEDVQNVLDDLTEHFGIVDGAGLLDLDGRVIAHTSRDLVGRGMGDRRSVNVALQGSMGI
ENLPNHTGELATIVTTPVMKDGKTQGVLYAYMSLPRLSAGTTDTIKIGKDGFCAVYDSEGRVLMHPDKSLIGTDGSNQPH
VRAALGNGNGRVVYDHNDTEMVAYYRHMPESNWHVVLVGDRDELLEPARNLLKENMLMGGVAILVVGCIIIVVARGIARS
IKAGENYVQAVAGGNFNPSPQEETELAQAARRGDEIGGLSQGIQGMVGKLRSLFSESEEKNHQAEIAKTEAEEAMGEAQE
ARKQAENARQEGMLAAAGQLEAVAGIISSASTQLSAQIEQSDRSAAESSQRLSEAATAMNQMNATVQEVAHNAAAASSAS
RETKEKAHAGAQIVEQAVRSIEAVRHVSEELKSDMAELGDHAQSITRIMNVISDIADQTNLLALNAAIEAARAGDAGRGF
AVVADEVRKLAEKTMASTHDVSAAIQAIQNSTAKSMSSADNAVNQIAQATNYASESGQALREIVATVEGTSDQVNAIATA
SEEQSAASDEINQSIVQVNEMSRQSAVAMAEATQAVAELAAQAHTLKNLIAQMKLG

Sequences:

>Translated_696_residues
MKMGIMSKMMLNILVPSMLGLTAVCVFSYWRAETSLTQQIAHELNTVIDKQVHGLATVQQMTRGLMKTSAESNHVKNALL
RRGSSQSVLEVVYDGEPASYGSEDVQNVLDDLTEHFGIVDGAGLLDLDGRVIAHTSRDLVGRGMGDRRSVNVALQGSMGI
ENLPNHTGELATIVTTPVMKDGKTQGVLYAYMSLPRLSAGTTDTIKIGKDGFCAVYDSEGRVLMHPDKSLIGTDGSNQPH
VRAALGNGNGRVVYDHNDTEMVAYYRHMPESNWHVVLVGDRDELLEPARNLLKENMLMGGVAILVVGCIIIVVARGIARS
IKAGENYVQAVAGGNFNPSPQEETELAQAARRGDEIGGLSQGIQGMVGKLRSLFSESEEKNHQAEIAKTEAEEAMGEAQE
ARKQAENARQEGMLAAAGQLEAVAGIISSASTQLSAQIEQSDRSAAESSQRLSEAATAMNQMNATVQEVAHNAAAASSAS
RETKEKAHAGAQIVEQAVRSIEAVRHVSEELKSDMAELGDHAQSITRIMNVISDIADQTNLLALNAAIEAARAGDAGRGF
AVVADEVRKLAEKTMASTHDVSAAIQAIQNSTAKSMSSADNAVNQIAQATNYASESGQALREIVATVEGTSDQVNAIATA
SEEQSAASDEINQSIVQVNEMSRQSAVAMAEATQAVAELAAQAHTLKNLIAQMKLG
>Mature_696_residues
MKMGIMSKMMLNILVPSMLGLTAVCVFSYWRAETSLTQQIAHELNTVIDKQVHGLATVQQMTRGLMKTSAESNHVKNALL
RRGSSQSVLEVVYDGEPASYGSEDVQNVLDDLTEHFGIVDGAGLLDLDGRVIAHTSRDLVGRGMGDRRSVNVALQGSMGI
ENLPNHTGELATIVTTPVMKDGKTQGVLYAYMSLPRLSAGTTDTIKIGKDGFCAVYDSEGRVLMHPDKSLIGTDGSNQPH
VRAALGNGNGRVVYDHNDTEMVAYYRHMPESNWHVVLVGDRDELLEPARNLLKENMLMGGVAILVVGCIIIVVARGIARS
IKAGENYVQAVAGGNFNPSPQEETELAQAARRGDEIGGLSQGIQGMVGKLRSLFSESEEKNHQAEIAKTEAEEAMGEAQE
ARKQAENARQEGMLAAAGQLEAVAGIISSASTQLSAQIEQSDRSAAESSQRLSEAATAMNQMNATVQEVAHNAAAASSAS
RETKEKAHAGAQIVEQAVRSIEAVRHVSEELKSDMAELGDHAQSITRIMNVISDIADQTNLLALNAAIEAARAGDAGRGF
AVVADEVRKLAEKTMASTHDVSAAIQAIQNSTAKSMSSADNAVNQIAQATNYASESGQALREIVATVEGTSDQVNAIATA
SEEQSAASDEINQSIVQVNEMSRQSAVAMAEATQAVAELAAQAHTLKNLIAQMKLG

Specific function: Mediates Taxis Toward Dipeptides VIa An Interaction With The Periplasmic Dipeptide-Binding Protein. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of Attractants And Repellents In The Environment, Transduce A Signal From The Outsid

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=244, Percent_Identity=33.1967213114754, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI2367378, Length=239, Percent_Identity=32.2175732217573, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788195, Length=240, Percent_Identity=32.5, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787690, Length=269, Percent_Identity=32.7137546468402, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1789453, Length=289, Percent_Identity=29.0657439446367, Blast_Score=94, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF00989 PAS [H]

EC number: NA

Molecular weight: Translated: 73923; Mature: 73923

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMGIMSKMMLNILVPSMLGLTAVCVFSYWRAETSLTQQIAHELNTVIDKQVHGLATVQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTRGLMKTSAESNHVKNALLRRGSSQSVLEVVYDGEPASYGSEDVQNVLDDLTEHFGIVD
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GAGLLDLDGRVIAHTSRDLVGRGMGDRRSVNVALQGSMGIENLPNHTGELATIVTTPVMK
CCCEEECCCEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
DGKTQGVLYAYMSLPRLSAGTTDTIKIGKDGFCAVYDSEGRVLMHPDKSLIGTDGSNQPH
CCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCCCCE
VRAALGNGNGRVVYDHNDTEMVAYYRHMPESNWHVVLVGDRDELLEPARNLLKENMLMGG
EEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
VAILVVGCIIIVVARGIARSIKAGENYVQAVAGGNFNPSPQEETELAQAARRGDEIGGLS
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHH
QGIQGMVGKLRSLFSESEEKNHQAEIAKTEAEEAMGEAQEARKQAENARQEGMLAAAGQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EAVAGIISSASTQLSAQIEQSDRSAAESSQRLSEAATAMNQMNATVQEVAHNAAAASSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RETKEKAHAGAQIVEQAVRSIEAVRHVSEELKSDMAELGDHAQSITRIMNVISDIADQTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMASTHDVSAAIQAIQNSTAKSMSSAD
EEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAVNQIAQATNYASESGQALREIVATVEGTSDQVNAIATASEEQSAASDEINQSIVQVNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
MSRQSAVAMAEATQAVAELAAQAHTLKNLIAQMKLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKMGIMSKMMLNILVPSMLGLTAVCVFSYWRAETSLTQQIAHELNTVIDKQVHGLATVQQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MTRGLMKTSAESNHVKNALLRRGSSQSVLEVVYDGEPASYGSEDVQNVLDDLTEHFGIVD
HHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHCCCCC
GAGLLDLDGRVIAHTSRDLVGRGMGDRRSVNVALQGSMGIENLPNHTGELATIVTTPVMK
CCCEEECCCEEEEECCHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCC
DGKTQGVLYAYMSLPRLSAGTTDTIKIGKDGFCAVYDSEGRVLMHPDKSLIGTDGSNQPH
CCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCEEECCCCCCCCCCCCCCCE
VRAALGNGNGRVVYDHNDTEMVAYYRHMPESNWHVVLVGDRDELLEPARNLLKENMLMGG
EEEEEECCCCEEEEECCCCHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
VAILVVGCIIIVVARGIARSIKAGENYVQAVAGGNFNPSPQEETELAQAARRGDEIGGLS
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHH
QGIQGMVGKLRSLFSESEEKNHQAEIAKTEAEEAMGEAQEARKQAENARQEGMLAAAGQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
EAVAGIISSASTQLSAQIEQSDRSAAESSQRLSEAATAMNQMNATVQEVAHNAAAASSAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RETKEKAHAGAQIVEQAVRSIEAVRHVSEELKSDMAELGDHAQSITRIMNVISDIADQTN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
LLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMASTHDVSAAIQAIQNSTAKSMSSAD
EEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAVNQIAQATNYASESGQALREIVATVEGTSDQVNAIATASEEQSAASDEINQSIVQVNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
MSRQSAVAMAEATQAVAELAAQAHTLKNLIAQMKLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1548224 [H]